MPD: JaxKOMP-EAP genotype: Slmap<sup>em1(IMPC)J</sup>/Mmjax -/+

JaxKOMP-EAP effect sizes: Slmap^em1(IMPC)J/Mmjax -/+ Gene Slmap

MULTIPLE (NUMERIC) TRAIT PROFILE PLOT — Early Adult Phenotyping study (EAP)

In this plot, data points are the computed genotype effect size vs. C57BL/6NJ controls, for all measured numeric phenotypes in JaxKOMP-EAP

Dimensions Width: × Height: px

Plot Options Group by Procedure Standard Error Show Effect Sizes RankZ

Significance Threshold p-Value Threshold Adjusted Unadjusted

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Procedure	JaxKOMP-EAP Trait	Trait Effect	Trait Effect SE	Trait Effect RankZ	Adjusted p-value	Unadjusted p-value

ABR test	auditory brainstem response (ABR) threshold, sound pressure level, 6 kHz pip	11.067	3.1818	1.9267	0.113	0.00337
ABR test	auditory brainstem response (ABR) threshold, sound pressure level, 12 kHz pip	1.3442	2.4587	0.32367	0.882	0.592
ABR test	auditory brainstem response (ABR) threshold, sound pressure level, 24 kHz pip	-7.3268	4.1098	-1.2144	0.422	0.0949
ABR test	auditory brainstem response (ABR) threshold, sound pressure level, 30 kHz pip	-17.194	3.6518	-1.9384	0.0208	0.000280
body composition	body length	-0.0094170	0.051388	0.076303	0.946	0.856
body composition	body weight (at time of DXA)	-1.7350	0.60853	-1.0832	0.0458	0.00756
body composition	bone area, whole body scan, head excluded	-0.37683	0.12528	-1.1868	0.0540	0.00509
body composition	bone mineral content of whole body scan, head excluded	-0.021748	0.010233	-0.99616	0.198	0.0416
body composition	bone mineral content to body weight ratio	-0.00076809	0.00049256	-0.78313	0.362	0.129
body composition	bone mineral density of whole body scan, head excluded	-0.00087756	0.00054504	-0.91599	0.370	0.118
body composition	fat tissue mass of whole body scan, head excluded	-0.23523	0.37556	-0.42773	0.757	0.536
body composition	fat tissue mass to body weight ratio	-0.0087535	0.013371	-0.35404	0.733	0.518
body composition	lean tissue mass of whole body scan, head excluded	0.53448	0.38295	0.91221	0.471	0.173
body composition	lean tissue mass to body weight ratio	0.021443	0.016119	1.0535	0.445	0.193
body composition	percent fat, whole body scan, head excluded	-1.0489	1.3264	-0.47918	0.666	0.435
body composition	ratio of soft-tissue attenuation coefficients	0.0011679	0.0014741	0.47724	0.664	0.434
body composition	tissue area	-0.32611	0.19321	-0.91978	0.351	0.101
body composition	total tissue mass, whole body scan, head excluded	0.34313	0.24860	0.51627	0.415	0.177
clinical blood chemistry	alanine transaminase (plasma ALT)	-4.9095	3.4539	-0.47574	0.541	0.171
clinical blood chemistry	albumin (plasma Alb)	-0.20370	0.55710	-0.24923	0.897	0.718
clinical blood chemistry	alkaline phosphatase (plasma ALP)	-0.85470	2.4410	-0.66961	0.868	0.730
clinical blood chemistry	aspartate transaminase (plasma AST)	10.907	5.9314	0.47683	0.364	0.0816
clinical blood chemistry	aspartate transaminase to alanine transaminase ratio (plasma AST:ALT)	0.48547	0.16174	1.3065	0.156	0.00734
clinical blood chemistry	blood urea nitrogen (BUN)	0.97737	2.8817	0.35944	0.873	0.738
clinical blood chemistry	calcium (plasma Ca)	-0.23333	0.061721	-1.3224	0.0178	0.00117
clinical blood chemistry	creatinine (plasma)	0.11021	0.028345	2.1789	0.0190	0.000914
clinical blood chemistry	glucose (plasma GLU, no fast)	-61.749	21.583	-1.6717	0.0506	0.00966
clinical blood chemistry	HDL cholesterol (plasma HDL)	-7.7114	6.1638	-1.7828	0.530	0.225
clinical blood chemistry	HDL cholesterol to total cholesterol ratio	-0.079287	0.019166	-2.7658	0.0243	0.000511
clinical blood chemistry	phosphorus (plasma phosphate)	0.11667	0.25420	0.15091	0.830	0.651
clinical blood chemistry	total bilirubin (plasma TBIL)	0.025996	0.015847	1.4658	0.406	0.117
clinical blood chemistry	total cholesterol (plasma CHOL, no fast)	-0.31161	6.9935	-0.29498	0.992	0.965
clinical blood chemistry	total protein (plasma TP)	0.42251	1.1446	0.23922	0.867	0.716
clinical blood chemistry	triglyceride (plasma TG, no fast)	25.918	11.427	1.4700	0.189	0.0352
EKG	duration of PQ interval	0.28250	0.67389	0.42999	0.939	0.697
EKG	duration of PR interval	0.42500	0.61139	0.51794	0.909	0.525
EKG	duration of QRS interval	-0.10462	0.54259	-0.42999	0.988	0.856
EKG	duration of QT interval	-0.91875	0.95840	-0.70258	0.858	0.392
EKG	duration of QTC interval, calculated by dividing QT interval by square root of preceding RR interval	-0.81000	0.97284	-0.76861	0.911	0.452
EKG	duration of RR interval	0.17865	1.2936	0.32819	0.955	0.897
EKG	duration of ST interval	-0.92875	0.91995	-0.68719	0.792	0.370
EKG	heart rate coefficient of variation (signal intensity)	0.57525	1.0761	0.53414	0.927	0.621
EKG	heart rate variability, mean of differences between sequential beats; beats per min	4.1988	7.6856	0.56460	0.931	0.614
EKG	heart rate, beats per min	-0.76513	10.582	-0.30620	0.981	0.946
EKG	mean R amplitude, mean amplitude of signal measured from isoelectric line to peak of QRS	-0.13587	0.087111	-1.2085	0.572	0.194
EKG	mean SR amplitude, mean amplitude of signal measured from signal minimum line to peak of QRS	-0.15337	0.10241	-0.95515	0.576	0.209
EKG	number of signals	-6.2750	4.3439	-1.2006	0.734	0.222
EKG	proportion of number pairs of successive beat-to-beat intervals that exceed 50 ms	2.8905	4.3063	0.61193	0.886	0.539
EKG	QT dispersion, measured as inter-lead variability of QT intervals	2.1875	3.3166	0.68975	0.960	0.546
EKG	QTc dispersion, calculated as rate-corrected QT dispersion	2.8237	3.7438	0.74182	0.931	0.493
EKG	root mean square of successive differences of neighboring RR intervals	1.3109	2.2497	0.80988	0.918	0.591
glucose tolerance test	amount glucose injected	-3.4685	2.6320	-0.62984	0.748	0.413
glucose tolerance test	plasma glucose, 0min	-0.0071238	9.7994	-0.23835	1.00	1.00
glucose tolerance test	plasma glucose, 15min	-1.1250	19.851	0.076949	0.986	0.964
glucose tolerance test	plasma glucose, 30min	26.273	37.686	0.89608	0.833	0.612
glucose tolerance test	plasma glucose, 60min	17.438	13.488	0.80730	0.733	0.419
glucose tolerance test	plasma glucose, 120min	-6.1625	8.2423	-0.57680	0.821	0.591
grip strength	body weight (at time of grip strength test)	-1.3270	0.31442	-0.93324	0.00276	0.000197
grip strength	forelimb and hindlimb grip strength (mean of trials), average	-21.335	7.7790	-1.2078	0.0551	0.0100
grip strength	forelimb and hindlimb grip strength (mean of trials), average normalized to bw	-0.53256	0.36366	-0.60760	0.334	0.153
grip strength	forelimb and hindlimb grip strength by trial, trial1	-23.716	9.9664	-1.3174	0.146	0.0237
grip strength	forelimb and hindlimb grip strength by trial, trial2	-15.900	9.4212	-0.75803	0.301	0.102
grip strength	forelimb and hindlimb grip strength by trial, trial3	-26.063	9.1619	-1.3900	0.0693	0.00781
grip strength	forelimb grip strength (mean of trials), average	-12.650	4.2019	-1.2511	0.0511	0.00515
grip strength	forelimb grip strength (mean of trials), average normalized to bw	-0.79848	0.23180	-1.5575	0.0289	0.00171
grip strength	forelimb grip strength by trial, trial1	-11.600	6.4649	-1.0238	0.346	0.0825
grip strength	forelimb grip strength by trial, trial2	-11.293	5.7036	-0.97596	0.287	0.0566
grip strength	forelimb grip strength by trial, trial3	-24.822	4.8599	-2.1248	0.00244	0.0000172
heart weight	heart weight, normalized to body weight	0.20858	0.17518	0.28276	0.468	0.247
heart weight	heart weight, weight	5.4417	4.0871	0.33093	0.401	0.197
hematology	basophil differential (percent of total WBC)	-0.10167	0.044587	-1.2960	0.352	0.0337
hematology	calculated hemoglobin (cHGB)	-0.24167	0.11882	-0.96835	0.254	0.0554
hematology	eosinophil differential (percent of total WBC)	-0.14167	0.28852	-0.31774	0.882	0.629
hematology	hematocrit (HCT)	-0.42500	0.44989	-0.76756	0.628	0.356
hematology	hemoglobin concentration distribution width (HDW)	0.047817	0.025985	1.2823	0.338	0.0806
hematology	large unstained cells (percent of total WBC)	0.070931	0.088083	0.45564	0.743	0.431
hematology	lymphocyte differential (percent of total WBC)	2.1917	0.84055	0.76024	0.123	0.0169
hematology	mean corpuscular hemoglobin (CHr)	0.14944	0.090436	1.1230	0.306	0.114
hematology	mean platelet volume (MPV)	0.42500	0.083512	1.5764	0.00112	0.0000560
hematology	mean RBC corpuscular hemoglobin (MCH)	0.83143	0.27272	1.9840	0.102	0.00661
hematology	mean RBC corpuscular hemoglobin concentration (MCHC)	-0.35833	0.54524	-0.70314	0.812	0.519
hematology	mean RBC corpuscular volume (MCV)	0.88333	0.27576	1.4417	0.0318	0.00446
hematology	measured hemoglobin (mHGB)	0.32851	0.27613	0.64264	0.561	0.249
hematology	monocyte differential (percent of total WBC)	-0.16667	0.13525	-0.33558	0.592	0.232
hematology	neutrophil differential (percent of total WBC)	-1.6500	0.70092	-0.73136	0.164	0.0289
hematology	platelet count (PLT; units per volume x 10³)	36.167	47.706	0.54363	0.761	0.457
hematology	RBC corpuscular distribution width (RDW)	0.79531	0.25228	1.9044	0.0595	0.00501
hematology	RBC corpuscular hemoglobin concentration mean (CHCM)	-0.38924	0.19956	-1.0760	0.227	0.0653
hematology	red blood cell count (RBC; per volume x 10⁶)	-0.28833	0.10863	-1.3712	0.122	0.0152
hematology	reticulocyte count (Retic; units per volume x 10⁹)	-21.517	21.328	-0.83967	0.705	0.325
hematology	reticulocyte differential (percent of total RBC)	-0.11667	0.21788	-0.28750	0.840	0.598
hematology	white blood cell count (WBC; units per volume x 10³)	-1.0621	0.76581	-0.56595	0.379	0.182
holeboard	number of hole pokes by individual hole number, 20 min test, 1	0.48050	0.96433	0.53508	0.883	0.622
holeboard	number of hole pokes by individual hole number, 20 min test, 2	-0.89682	0.42025	-1.2796	0.473	0.0406
holeboard	number of hole pokes by individual hole number, 20 min test, 3	-0.16250	0.44653	-0.19105	0.937	0.718
holeboard	number of hole pokes by individual hole number, 20 min test, 4	-0.39780	0.92937	-0.31664	0.908	0.672
holeboard	number of hole pokes by individual hole number, 20 min test, 5	0.17500	0.46692	0.39580	0.943	0.710
holeboard	number of hole pokes by individual hole number, 20 min test, 6	-0.27500	0.28334	-0.75845	0.865	0.339
holeboard	number of hole pokes by individual hole number, 20 min test, 7	-0.53750	0.32965	-1.4901	0.731	0.113
holeboard	number of hole pokes by individual hole number, 20 min test, 8	-0.27500	0.40215	-0.34338	0.874	0.499
holeboard	number of hole pokes by individual hole number, 20 min test, 9	0.15000	0.41842	0.38423	0.948	0.722
holeboard	number of hole pokes by individual hole number, 20 min test, 10	-0.31250	0.33636	-0.83059	0.861	0.360
holeboard	number of hole pokes by individual hole number, 20 min test, 11	-0.45296	0.55710	-1.2132	0.857	0.422
holeboard	number of hole pokes by individual hole number, 20 min test, 12	-0.70000	0.38598	-1.0988	0.516	0.0791
holeboard	number of hole pokes by individual hole number, 20 min test, 13	0.47177	0.45286	0.54934	0.718	0.305
holeboard	number of hole pokes by individual hole number, 20 min test, 14	-0.55334	0.52215	-0.78802	0.718	0.297
holeboard	number of hole pokes by individual hole number, 20 min test, 15	-0.16250	0.46421	-0.14558	0.914	0.729
holeboard	number of hole pokes by individual hole number, 20 min test, 16	1.5750	1.0225	1.3564	0.559	0.133
holeboard	total number of hole pokes, 20 min test	-2.8640	4.1675	-0.30315	0.732	0.497
light / dark	fecal boli count, 20 min test	1.3322	0.71988	1.3520	0.437	0.0738
light / dark	latency to enter dark zone, 20 min test	56.808	41.577	0.89443	0.612	0.182
light / dark	number of transitions between light and dark zones, 20 min test	-6.4000	7.1826	-0.53560	0.679	0.380
light / dark	percentage of total time in dark zone, 20 min test	0.14675	3.7365	0.15201	0.989	0.969
light / dark	percentage of total time in light zone, 20 min test	-0.14675	3.7365	-0.15885	0.988	0.969
light / dark	time mobile in dark zone, 20 min test	-7.3505	11.276	-0.58624	0.775	0.519
light / dark	time mobile in light zone, 20 min test	4.4713	9.2141	0.051399	0.816	0.631
light / dark	time spent in dark zone, 20 min test	-63.015	55.162	-0.72545	0.673	0.262
light / dark	time spent in light zone, 20 min test	63.015	55.162	0.72545	0.673	0.262
open field	average speed in center of arena, 20 min test	0.90371	0.41278	1.3885	0.261	0.0365
open field	average speed in periphery of arena, 20 min test	0.24289	0.15451	0.41800	0.306	0.126
open field	distance traveled habituation ratio, 20 min test	-4.7268	7.7454	-0.36580	0.787	0.546
open field	distance traveled in center of arena, 20 min test	-70.816	89.773	-0.82339	0.678	0.436
open field	distance traveled in periphery of arena, 20 min test	382.40	154.05	1.0027	0.100	0.0187
open field	distance traveled slope, 20 min test	-5.5248	7.2076	-0.45343	0.731	0.449
open field	distance traveled, 20 min test, 1st 5min	87.199	74.076	0.36436	0.493	0.248
open field	distance traveled, 20 min test, 2nd 5min	16.020	63.046	-0.32589	0.908	0.801
open field	distance traveled, 20 min test, 3rd 5min	46.562	50.376	0.077276	0.621	0.362
open field	distance traveled, 20 min test, 4th 5min	28.817	55.066	-0.11775	0.790	0.605
open field	number of clockwise revolution episodes, 20 min test	1.7773	1.5376	0.62390	0.617	0.257
open field	number of counter-clockwise revolution episodes, 20 min test	-1.0229	0.96731	-0.96993	0.579	0.298
open field	number of fecal boli, 20 min test	1.9985	0.86921	1.6552	0.214	0.0284
open field	number of rears in 5 min bins, 20 min test, 1st 5min	-1.5866	2.2698	-0.62881	0.727	0.490
open field	number of rears in 5 min bins, 20 min test, 2nd 5min	1.9526	2.4892	0.14619	0.703	0.439
open field	number of rears in 5 min bins, 20 min test, 3rd 5min	-1.5979	3.0386	-0.65066	0.793	0.603
open field	number of rears in 5 min bins, 20 min test, 4th 5min	-2.5161	3.7140	-0.87342	0.736	0.503
open field	percentage of total time in center of arena, 20 min test	-8.0348	4.0186	-2.0465	0.297	0.0544
open field	percentage of total time in center of arena, slope, 20 min test	-2.7494	1.6322	-1.2537	0.554	0.102
open field	percentage of total time in center, habituation ratio, 20 min test	-2.9647	1.7125	-1.3442	0.537	0.0934
open field	percentage of total time in corners of arena, 20 min test	9.8714	4.8378	1.9480	0.272	0.0502
open field	percentage of total time in corners, habituation ratio, 20 min test	3.8773	2.5883	1.3815	0.630	0.145
open field	percentage of total time in corners, slope, 20 min test	4.2478	2.4151	1.5778	0.545	0.0888
open field	permanence time in center of arena, 20 min test	-96.420	48.224	-2.0357	0.298	0.0544
open field	permanence time in corners of arena, 20 min test	118.45	58.051	1.9480	0.272	0.0502
open field	permanence time in periphery of arena, 20 min test	96.424	48.238	2.0357	0.298	0.0545
open field	total distance traveled, 20 min test	306.65	200.97	0.40048	0.318	0.137
open field	total number of rears, 20 min test	-1.3637	9.1068	-0.43712	0.947	0.882
open field	whole arena average speed, 20 min test	0.25543	0.16733	0.40193	0.318	0.137
open field	whole arena resting time, 20 min test	-8.5173	23.080	0.31740	0.836	0.715
open field	whole arena time spent mobile, 20 min test	8.6036	23.089	-0.14891	0.841	0.712
open field	whole arena time spent vertical, 20 min test	-3.8876	9.7340	-0.44897	0.880	0.692
SHIRPA	locomotor activity (number of squares in the arena the mouse moves into with all four paws in first 30 s of test)	-2.5720	1.3878	-0.89358	0.316	0.0734
startle / PPI	average baseline movement during background noise	-0.99053	1.5619	-0.69263	0.895	0.531
startle / PPI	average of each corrected maximum percent pre-pulse inhibition value	-0.13038	0.092361	-1.2655	0.523	0.170
startle / PPI	average of each corrected percent pre-pulse inhibition value	-0.15766	0.087840	-1.6149	0.374	0.0848
startle / PPI	average percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 74dB sound pressure level	-6.2105	11.799	-0.61794	0.931	0.603
startle / PPI	average percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 78dB sound pressure level	-11.096	9.8279	-1.1332	0.639	0.270
startle / PPI	average percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 82dB sound pressure level	-24.093	8.6254	-2.0747	0.109	0.00987
startle / PPI	average startle response to full pulse (120 dB)	82.865	33.087	1.4851	0.100	0.0189
startle / PPI	average startle response to full pulse (120 dB) preceded by pre-pulse, 74dB sound pressure level	144.58	46.691	1.9479	0.0365	0.00478
startle / PPI	average startle response to full pulse (120 dB) preceded by pre-pulse, 78dB sound pressure level	136.36	45.755	1.9867	0.0441	0.00633
startle / PPI	average startle response to full pulse (120 dB) preceded by pre-pulse, 82dB sound pressure level	133.86	40.891	2.0073	0.0293	0.00310
startle / PPI	average startle response to pre-pulse, 74dB sound pressure level	4.0445	2.2070	1.9296	0.560	0.0788
startle / PPI	average startle response to pre-pulse, 78dB sound pressure level	-2.6030	1.6398	-1.5852	0.623	0.125
startle / PPI	average startle response to pre-pulse, 82dB sound pressure level	3.9513	2.4945	1.3137	0.551	0.126
startle / PPI	corrected average percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 74dB sound pressure level	-0.050266	0.13391	-0.43894	0.941	0.711
startle / PPI	corrected average percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 78dB sound pressure level	-0.13362	0.10881	-1.1932	0.573	0.231
startle / PPI	corrected average percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 82dB sound pressure level	-0.28909	0.092307	-2.1390	0.0523	0.00439
startle / PPI	corrected average startle response to full pulse (120 dB) minus average baseline movement during background noise	83.829	33.297	1.5022	0.0972	0.0183
startle / PPI	corrected average startle response to pre-pulse and full pulse (120 dB) minus average startle response to same pre-pulse, 74dB sound pressure level	140.54	47.046	1.9387	0.0436	0.00623
startle / PPI	corrected average startle response to pre-pulse and full pulse (120 dB) minus average startle response to same pre-pulse, 78dB sound pressure level	137.49	46.036	1.9969	0.0446	0.00624
startle / PPI	corrected average startle response to pre-pulse and full pulse (120 dB) minus average startle response to same pre-pulse, 82dB sound pressure level	129.91	39.691	2.0288	0.0286	0.00311
startle / PPI	corrected maximum percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 74dB sound pressure level	0.014593	0.13578	0.16112	0.993	0.915
startle / PPI	corrected maximum percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 78dB sound pressure level	-0.12506	0.11609	-1.0539	0.638	0.292
startle / PPI	corrected maximum percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 82dB sound pressure level	-0.28067	0.10163	-1.9967	0.0882	0.0106
startle / PPI	corrected maximum startle response to full pulse (120 dB) minus maximum baseline movement during background noise	344.25	127.83	1.5952	0.0724	0.0122
startle / PPI	corrected maximum startle response to pre-pulse and full pulse (120 dB) minus maximum startle response to same pre-pulse, 74dB sound pressure level	486.12	163.87	1.9387	0.0440	0.00654
startle / PPI	corrected maximum startle response to pre-pulse and full pulse (120 dB) minus maximum startle response to same pre-pulse, 78dB sound pressure level	493.14	162.42	1.9969	0.0399	0.00554
startle / PPI	corrected maximum startle response to pre-pulse and full pulse (120 dB) minus maximum startle response to same pre-pulse, 82dB sound pressure level	477.04	144.71	2.0628	0.0273	0.00293
startle / PPI	maximum baseline movement during background noise	1.8772	5.3919	0.60780	0.946	0.731
startle / PPI	maximum percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 74dB sound pressure level	0.41195	12.479	0.084870	1.00	0.974
startle / PPI	maximum percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 78dB sound pressure level	-10.161	10.823	-0.97905	0.702	0.357
startle / PPI	maximum percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 82dB sound pressure level	-23.558	9.8263	-1.9479	0.161	0.0243
startle / PPI	maximum startle response to full pulse (120 dB)	341.67	127.02	1.5952	0.0718	0.0123
startle / PPI	maximum startle response to full pulse (120 dB) preceded by pre-pulse, 74dB sound pressure level	495.24	162.79	1.9387	0.0401	0.00546
startle / PPI	maximum startle response to full pulse (120 dB) preceded by pre-pulse, 78dB sound pressure level	490.62	161.92	1.9969	0.0393	0.00562
startle / PPI	maximum startle response to full pulse (120 dB) preceded by pre-pulse, 82dB sound pressure level	486.70	147.04	2.0747	0.0270	0.00283
startle / PPI	maximum startle response to pre-pulse, 74dB sound pressure level	9.1154	5.1711	1.8781	0.561	0.0902
startle / PPI	maximum startle response to pre-pulse, 78dB sound pressure level	-5.5385	4.1995	-1.4363	0.706	0.199
startle / PPI	maximum startle response to pre-pulse, 82dB sound pressure level	9.6584	5.1460	1.2812	0.426	0.0723

MULTIPLE (CATEGORICAL) TRAIT PROFILE PLOT — Early Adult Phenotyping study (EAP)

In this plot, data points are the computed genotype effect % vs. C57BL/6NJ controls, for all measured categorical phenotypes in JaxKOMP-EAP

Dimensions Width: × Height: px

Plot Options Group by Procedure

Include Sexes Data Both Females Males

Significance Threshold p-Value Threshold

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Procedure	JaxKOMP-EAP Trait	Sex	Trait Effect	P-value

eye morphology	anterior chamber depth	males	0.0 %	1.0
eye morphology	anterior chamber depth	both	1.0 %	1.0
eye morphology	bulging eye	males	0.0 %	1.0
eye morphology	bulging eye	both	1.0 %	1.0
eye morphology	cornea	males	2.0 %	1.0
eye morphology	cornea	both	3.0 %	1.00
eye morphology	cornea opacity	males	1.0 %	1.0
eye morphology	cornea opacity	both	3.0 %	1.0
eye morphology	cornea vascularization	males	1.0 %	1.0
eye morphology	cornea vascularization	both	2.0 %	1.0
eye morphology	corneal deposits	males	1.0 %	1.0
eye morphology	corneal deposits	both	1.0 %	1.00
eye morphology	corneal mineralization	males	1.0 %	1.0
eye morphology	corneal mineralization	both	1.0 %	1.00
eye morphology	corneal scleralization	males	1.0 %	1.0
eye morphology	corneal scleralization	both	2.0 %	1.0
eye morphology	corneal ulcer	males	1.0 %	1.0
eye morphology	corneal ulcer	both	1.0 %	1.00
eye morphology	eye closure	males	0.0 %	1.0
eye morphology	eye closure	both	1.0 %	1.00
eye morphology	eye hemorrhage or blood presence	males	1.0 %	1.0
eye morphology	eye hemorrhage or blood presence	both	1.0 %	1.0
eye morphology	eyelid morphology	males	0.0 %	1.0
eye morphology	eyelid morphology	both	1.0 %	1.00
eye morphology	eyes (present, absent)	males	0.0 %	1.0
eye morphology	eyes (present, absent)	both	0.0 %	1.00
eye morphology	fusion between cornea and lens	males	2.0 %	1.0
eye morphology	fusion between cornea and lens	both	3.0 %	1.0
eye morphology	iris pigmentation	males	1.0 %	1.0
eye morphology	iris pigmentation	both	2.0 %	1.0
eye morphology	iris transillumination	males	1.0 %	1.0
eye morphology	iris transillumination	both	1.0 %	1.00
eye morphology	irispupil	males	3.0 %	1.0
eye morphology	irispupil	both	3.0 %	1.0
eye morphology	lacrimation	males	2.0 %	1.0
eye morphology	lacrimation	both	3.0 %	1.00
eye morphology	lens	males	8.0 %	1.0
eye morphology	lens	both	9.0 %	1.00
eye morphology	lens opacity	males	23.0 %	0.205
eye morphology	lens opacity	both	22.0 %	0.262
eye morphology	narrow eye opening	males	1.0 %	1.0
eye morphology	narrow eye opening	both	1.0 %	1.00
eye morphology	optic disc	males	2.0 %	1.00
eye morphology	optic disc	both	3.0 %	1.00
eye morphology	persistence of hyaloid vascular system	males	5.0 %	1.0
eye morphology	persistence of hyaloid vascular system	both	9.0 %	1.00
eye morphology	pupil dilation	males	1.0 %	1.00
eye morphology	pupil dilation	both	2.0 %	1.00
eye morphology	pupil light response	males	1.0 %	1.0
eye morphology	pupil light response	both	2.0 %	1.0
eye morphology	pupil position	males	3.0 %	1.0
eye morphology	pupil position	both	4.0 %	1.0
eye morphology	pupil shape	males	2.0 %	1.0
eye morphology	pupil shape	both	3.0 %	1.0
eye morphology	retina	males	19.0 %	0.500
eye morphology	retina	both	21.0 %	0.422
eye morphology	retinal blood vessels	males	2.0 %	1.0
eye morphology	retinal blood vessels	both	3.0 %	1.00
eye morphology	retinal blood vessels pattern	males	2.0 %	1.0
eye morphology	retinal blood vessels pattern	both	4.0 %	1.00
eye morphology	retinal blood vessels structure	males	2.0 %	1.0
eye morphology	retinal blood vessels structure	both	3.0 %	1.0
eye morphology	retinal pigmentation	males	20.0 %	0.441
eye morphology	retinal pigmentation	both	20.0 %	0.424
eye morphology	retinal structure	males	2.0 %	1.0
eye morphology	retinal structure	both	3.0 %	1.00
eye morphology	synechia	males	2.0 %	1.00
eye morphology	synechia	both	3.0 %	1.00
eye morphology	vitreous	males	2.0 %	1.0
eye morphology	vitreous	both	3.0 %	1.0
SHIRPA	activity body position	females	1.0 %	1.0
SHIRPA	activity body position	males	2.0 %	1.0
SHIRPA	activity body position	both	1.0 %	1.00
SHIRPA	aggression	females	0.0 %	1.00
SHIRPA	aggression	males	1.0 %	1.0
SHIRPA	aggression	both	1.0 %	1.0
SHIRPA	body length	females	0.0 %	1.0
SHIRPA	body length	males	0.0 %	1.00
SHIRPA	body length	both	0.0 %	1.00
SHIRPA	body position	females	0.0 %	1.0
SHIRPA	body position	males	1.0 %	1.0
SHIRPA	body position	both	0.0 %	1.0
SHIRPA	body thickness	females	1.0 %	1.0
SHIRPA	body thickness	males	0.0 %	1.0
SHIRPA	body thickness	both	0.0 %	1.0
SHIRPA	coat color abdomen	females	3.0 %	1.00
SHIRPA	coat color abdomen	males	4.0 %	1.0
SHIRPA	coat color abdomen	both	4.0 %	1.0
SHIRPA	coat color back	females	0.0 %	1.0
SHIRPA	coat color back	males	0.0 %	1.00
SHIRPA	coat color back	both	0.0 %	1.00
SHIRPA	coat color head	females	0.0 %	1.0
SHIRPA	coat color head	males	0.0 %	1.00
SHIRPA	coat color head	both	0.0 %	1.0
SHIRPA	coat color pattern abdomen	females	1.0 %	1.0
SHIRPA	coat color pattern abdomen	males	1.0 %	1.0
SHIRPA	coat color pattern abdomen	both	1.0 %	1.0
SHIRPA	coat color pattern back	females	0.0 %	1.0
SHIRPA	coat color pattern back	males	0.0 %	1.00
SHIRPA	coat color pattern back	both	0.0 %	1.0
SHIRPA	coat color pattern head	females	0.0 %	1.0
SHIRPA	coat color pattern head	males	0.0 %	1.0
SHIRPA	coat color pattern head	both	0.0 %	1.00
SHIRPA	coat hair abdomen texture appearance	females	2.0 %	1.0
SHIRPA	coat hair abdomen texture appearance	males	2.0 %	1.0
SHIRPA	coat hair abdomen texture appearance	both	2.0 %	1.0
SHIRPA	coat hair back texture appearance	females	0.0 %	1.0
SHIRPA	coat hair back texture appearance	males	0.0 %	1.0
SHIRPA	coat hair back texture appearance	both	0.0 %	1.0
SHIRPA	coat hair distribution abdomen	females	0.0 %	1.0
SHIRPA	coat hair distribution abdomen	males	1.0 %	1.00
SHIRPA	coat hair distribution abdomen	both	1.0 %	1.00
SHIRPA	coat hair distribution back	females	0.0 %	1.0
SHIRPA	coat hair distribution back	males	0.0 %	1.0
SHIRPA	coat hair distribution back	both	0.0 %	1.0
SHIRPA	coat hair distribution head	females	1.0 %	1.00
SHIRPA	coat hair distribution head	males	1.0 %	1.0
SHIRPA	coat hair distribution head	both	1.0 %	1.0
SHIRPA	coat hair head texture appearance	females	0.0 %	1.00
SHIRPA	coat hair head texture appearance	males	0.0 %	1.0
SHIRPA	coat hair head texture appearance	both	0.0 %	1.0
SHIRPA	contact righting	females	5.0 %	1.0
SHIRPA	contact righting	males	5.0 %	1.00
SHIRPA	contact righting	both	5.0 %	1.00
SHIRPA	ear morphology	females	0.0 %	1.0
SHIRPA	ear morphology	males	0.0 %	1.0
SHIRPA	ear morphology	both	0.0 %	1.0
SHIRPA	fat distribution	females	0.0 %	1.0
SHIRPA	fat distribution	males	0.0 %	1.0
SHIRPA	fat distribution	both	0.0 %	1.00
SHIRPA	forelimb digit number	females	0.0 %	1.00
SHIRPA	forelimb digit number	males	0.0 %	1.0
SHIRPA	forelimb digit number	both	0.0 %	1.00
SHIRPA	forelimb digit position	females	0.0 %	1.0
SHIRPA	forelimb digit position	males	0.0 %	1.0
SHIRPA	forelimb digit position	both	0.0 %	1.0
SHIRPA	forelimb digit shape	females	0.0 %	1.0
SHIRPA	forelimb digit shape	males	0.0 %	1.0
SHIRPA	forelimb digit shape	both	0.0 %	1.0
SHIRPA	forelimb digit size	females	0.0 %	1.0
SHIRPA	forelimb digit size	males	0.0 %	1.0
SHIRPA	forelimb digit size	both	0.0 %	1.0
SHIRPA	forelimb footpads	females	0.0 %	1.0
SHIRPA	forelimb footpads	males	0.0 %	1.0
SHIRPA	forelimb footpads	both	0.0 %	1.0
SHIRPA	forelimb nail length	females	0.0 %	1.0
SHIRPA	forelimb nail length	males	0.0 %	1.0
SHIRPA	forelimb nail length	both	0.0 %	1.0
SHIRPA	forelimb nail number	females	0.0 %	1.0
SHIRPA	forelimb nail number	males	0.0 %	1.0
SHIRPA	forelimb nail number	both	0.0 %	1.0
SHIRPA	forelimb nail position	females	0.0 %	1.0
SHIRPA	forelimb nail position	males	0.0 %	1.0
SHIRPA	forelimb nail position	both	0.0 %	1.0
SHIRPA	forelimb nail shape	females	0.0 %	1.0
SHIRPA	forelimb nail shape	males	0.0 %	1.0
SHIRPA	forelimb nail shape	both	0.0 %	1.0
SHIRPA	forelimbs position	females	0.0 %	1.0
SHIRPA	forelimbs position	males	0.0 %	1.0
SHIRPA	forelimbs position	both	0.0 %	1.0
SHIRPA	forelimbs shape	females	0.0 %	1.0
SHIRPA	forelimbs shape	males	0.0 %	1.0
SHIRPA	forelimbs shape	both	0.0 %	1.0
SHIRPA	forelimbs size	females	0.0 %	1.0
SHIRPA	forelimbs size	males	0.0 %	1.0
SHIRPA	forelimbs size	both	0.0 %	1.0
SHIRPA	forepaw position	females	0.0 %	1.0
SHIRPA	forepaw position	males	0.0 %	1.0
SHIRPA	forepaw position	both	0.0 %	1.0
SHIRPA	forepaw shape	females	0.0 %	1.0
SHIRPA	forepaw shape	males	0.0 %	1.0
SHIRPA	forepaw shape	both	0.0 %	1.0
SHIRPA	forepaw size	females	0.0 %	1.0
SHIRPA	forepaw size	males	0.0 %	1.0
SHIRPA	forepaw size	both	0.0 %	1.0
SHIRPA	gait (fluidity)	females	0.0 %	1.0
SHIRPA	gait (fluidity)	males	0.0 %	1.00
SHIRPA	gait (fluidity)	both	0.0 %	1.00
SHIRPA	genitalia morphology	females	0.0 %	1.00
SHIRPA	genitalia morphology	males	0.0 %	1.0
SHIRPA	genitalia morphology	both	0.0 %	1.00
SHIRPA	genitalia presence	females	0.0 %	1.0
SHIRPA	genitalia presence	males	0.0 %	1.0
SHIRPA	genitalia presence	both	0.0 %	1.0
SHIRPA	genitalia size	females	0.0 %	1.0
SHIRPA	genitalia size	males	0.0 %	1.0
SHIRPA	genitalia size	both	0.0 %	1.0
SHIRPA	head bobbing	females	0.0 %	1.0
SHIRPA	head bobbing	males	0.0 %	1.0
SHIRPA	head bobbing	both	0.0 %	1.0
SHIRPA	head morphology	females	0.0 %	1.0
SHIRPA	head morphology	males	0.0 %	1.00
SHIRPA	head morphology	both	0.0 %	1.0
SHIRPA	head size	females	0.0 %	1.0
SHIRPA	head size	males	0.0 %	1.0
SHIRPA	head size	both	0.0 %	1.00
SHIRPA	hindlimb digit number	females	1.0 %	1.00
SHIRPA	hindlimb digit number	males	0.0 %	1.0
SHIRPA	hindlimb digit number	both	0.0 %	1.00
SHIRPA	hindlimb digit position	females	0.0 %	1.0
SHIRPA	hindlimb digit position	males	0.0 %	1.0
SHIRPA	hindlimb digit position	both	0.0 %	1.0
SHIRPA	hindlimb digit shape	females	0.0 %	1.0
SHIRPA	hindlimb digit shape	males	0.0 %	1.0
SHIRPA	hindlimb digit shape	both	0.0 %	1.0
SHIRPA	hindlimb digit size	females	0.0 %	1.00
SHIRPA	hindlimb digit size	males	0.0 %	1.0
SHIRPA	hindlimb digit size	both	0.0 %	1.00
SHIRPA	hindlimb nail length	females	0.0 %	1.0
SHIRPA	hindlimb nail length	males	0.0 %	1.0
SHIRPA	hindlimb nail length	both	0.0 %	1.00
SHIRPA	hindlimb nail number	females	0.0 %	1.0
SHIRPA	hindlimb nail number	males	1.0 %	1.0
SHIRPA	hindlimb nail number	both	0.0 %	1.00
SHIRPA	hindlimb nail position	females	0.0 %	1.0
SHIRPA	hindlimb nail position	males	0.0 %	1.0
SHIRPA	hindlimb nail position	both	0.0 %	1.0
SHIRPA	hindlimb nail shape	females	0.0 %	1.0
SHIRPA	hindlimb nail shape	males	0.0 %	1.0
SHIRPA	hindlimb nail shape	both	0.0 %	1.0
SHIRPA	hindlimbs footpads	females	0.0 %	1.0
SHIRPA	hindlimbs footpads	males	0.0 %	1.0
SHIRPA	hindlimbs footpads	both	0.0 %	1.0
SHIRPA	hindlimbs position	females	0.0 %	1.0
SHIRPA	hindlimbs position	males	0.0 %	1.0
SHIRPA	hindlimbs position	both	0.0 %	1.0
SHIRPA	hindlimbs shape	females	0.0 %	1.0
SHIRPA	hindlimbs shape	males	0.0 %	1.0
SHIRPA	hindlimbs shape	both	0.0 %	1.0
SHIRPA	hindlimbs size	females	0.0 %	1.0
SHIRPA	hindlimbs size	males	0.0 %	1.0
SHIRPA	hindlimbs size	both	0.0 %	1.0
SHIRPA	hindpaw position	females	0.0 %	1.0
SHIRPA	hindpaw position	males	0.0 %	1.0
SHIRPA	hindpaw position	both	0.0 %	1.0
SHIRPA	hindpaw shape	females	0.0 %	1.0
SHIRPA	hindpaw shape	males	0.0 %	1.0
SHIRPA	hindpaw shape	both	0.0 %	1.0
SHIRPA	hindpaw size	females	0.0 %	1.0
SHIRPA	hindpaw size	males	0.0 %	1.0
SHIRPA	hindpaw size	both	0.0 %	1.0
SHIRPA	limb grasp	females	4.0 %	0.524
SHIRPA	limb grasp	males	7.0 %	0.375
SHIRPA	limb grasp	both	5.0 %	0.327
SHIRPA	lower lip morphology	females	0.0 %	1.0
SHIRPA	lower lip morphology	males	0.0 %	1.0
SHIRPA	lower lip morphology	both	0.0 %	1.0
SHIRPA	lower teeth appearance	females	0.0 %	1.0
SHIRPA	lower teeth appearance	males	0.0 %	1.00
SHIRPA	lower teeth appearance	both	0.0 %	1.00
SHIRPA	mouth morphology	females	0.0 %	1.0
SHIRPA	mouth morphology	males	0.0 %	1.00
SHIRPA	mouth morphology	both	0.0 %	1.00
SHIRPA	salivation	females	0.0 %	1.0
SHIRPA	salivation	males	0.0 %	1.0
SHIRPA	salivation	both	0.0 %	1.0
SHIRPA	skin color back paws	females	0.0 %	1.0
SHIRPA	skin color back paws	males	0.0 %	1.0
SHIRPA	skin color back paws	both	0.0 %	1.0
SHIRPA	skin color ear	females	0.0 %	1.0
SHIRPA	skin color ear	males	0.0 %	1.0
SHIRPA	skin color ear	both	0.0 %	1.0
SHIRPA	skin color front paws	females	0.0 %	1.0
SHIRPA	skin color front paws	males	0.0 %	1.0
SHIRPA	skin color front paws	both	0.0 %	1.0
SHIRPA	skin color snout	females	0.0 %	1.0
SHIRPA	skin color snout	males	0.0 %	1.0
SHIRPA	skin color snout	both	0.0 %	1.0
SHIRPA	skin color tail	females	0.0 %	1.0
SHIRPA	skin color tail	males	0.0 %	1.0
SHIRPA	skin color tail	both	0.0 %	1.0
SHIRPA	skin color whole body	females	0.0 %	1.0
SHIRPA	skin color whole body	males	0.0 %	1.0
SHIRPA	skin color whole body	both	0.0 %	1.0
SHIRPA	skin texture back paw	females	0.0 %	1.0
SHIRPA	skin texture back paw	males	0.0 %	1.0
SHIRPA	skin texture back paw	both	0.0 %	1.0
SHIRPA	skin texture ear	females	0.0 %	1.0
SHIRPA	skin texture ear	males	0.0 %	1.0
SHIRPA	skin texture ear	both	0.0 %	1.0
SHIRPA	skin texture front paws	females	0.0 %	1.0
SHIRPA	skin texture front paws	males	0.0 %	1.0
SHIRPA	skin texture front paws	both	0.0 %	1.0
SHIRPA	skin texture snout	females	0.0 %	1.0
SHIRPA	skin texture snout	males	0.0 %	1.0
SHIRPA	skin texture snout	both	0.0 %	1.0
SHIRPA	skin texture tail	females	0.0 %	1.0
SHIRPA	skin texture tail	males	0.0 %	1.0
SHIRPA	skin texture tail	both	0.0 %	1.0
SHIRPA	skin texture whole body	females	0.0 %	1.0
SHIRPA	skin texture whole body	males	0.0 %	1.00
SHIRPA	skin texture whole body	both	0.0 %	1.00
SHIRPA	snout size	females	0.0 %	1.0
SHIRPA	snout size	males	1.0 %	1.0
SHIRPA	snout size	both	0.0 %	1.0
SHIRPA	startle response	females	0.0 %	1.00
SHIRPA	startle response	males	0.0 %	1.00
SHIRPA	startle response	both	0.0 %	1.00
SHIRPA	tail curvature	females	0.0 %	1.00
SHIRPA	tail curvature	males	0.0 %	1.0
SHIRPA	tail curvature	both	0.0 %	1.0
SHIRPA	tail elevation	females	1.0 %	1.00
SHIRPA	tail elevation	males	11.0 %	0.142
SHIRPA	tail elevation	both	5.0 %	0.202
SHIRPA	tail length	females	0.0 %	1.0
SHIRPA	tail length	males	0.0 %	1.0
SHIRPA	tail length	both	0.0 %	1.00
SHIRPA	tail morphology	females	0.0 %	1.00
SHIRPA	tail morphology	males	0.0 %	1.0
SHIRPA	tail morphology	both	0.0 %	1.00
SHIRPA	tail presence	females	0.0 %	1.0
SHIRPA	tail presence	males	0.0 %	1.0
SHIRPA	tail presence	both	0.0 %	1.0
SHIRPA	tail shape	females	0.0 %	1.0
SHIRPA	tail shape	males	0.0 %	1.0
SHIRPA	tail shape	both	0.0 %	1.00
SHIRPA	tail thickness	females	0.0 %	1.0
SHIRPA	tail thickness	males	0.0 %	1.0
SHIRPA	tail thickness	both	0.0 %	1.0
SHIRPA	teeth presence	females	0.0 %	1.0
SHIRPA	teeth presence	males	0.0 %	1.00
SHIRPA	teeth presence	both	0.0 %	1.00
SHIRPA	transfer arousal	females	1.0 %	1.0
SHIRPA	transfer arousal	males	2.0 %	1.00
SHIRPA	transfer arousal	both	1.0 %	1.0
SHIRPA	tremor	females	0.0 %	1.0
SHIRPA	tremor	males	0.0 %	1.0
SHIRPA	tremor	both	0.0 %	1.00
SHIRPA	trunk curl	females	0.0 %	1.00
SHIRPA	trunk curl	males	0.0 %	1.0
SHIRPA	trunk curl	both	0.0 %	1.0
SHIRPA	unexpected behaviors (circling, head bobbing, jumping, retropulsion)	females	0.0 %	1.0
SHIRPA	unexpected behaviors (circling, head bobbing, jumping, retropulsion)	males	0.0 %	1.0
SHIRPA	unexpected behaviors (circling, head bobbing, jumping, retropulsion)	both	0.0 %	1.00
SHIRPA	upper lip morphology	females	0.0 %	1.0
SHIRPA	upper lip morphology	males	0.0 %	1.0
SHIRPA	upper lip morphology	both	0.0 %	1.0
SHIRPA	upper teeth appearance	females	0.0 %	1.0
SHIRPA	upper teeth appearance	males	0.0 %	1.0
SHIRPA	upper teeth appearance	both	0.0 %	1.00
SHIRPA	vibrissae appearance	females	2.0 %	1.0
SHIRPA	vibrissae appearance	males	1.0 %	1.0
SHIRPA	vibrissae appearance	both	1.0 %	1.0
SHIRPA	vibrissae presence	females	2.0 %	1.00
SHIRPA	vibrissae presence	males	1.0 %	1.0
SHIRPA	vibrissae presence	both	2.0 %	1.0
SHIRPA	vocalization	females	2.0 %	1.00
SHIRPA	vocalization	males	2.0 %	1.0
SHIRPA	vocalization	both	2.0 %	1.00

GENOTYPE CORRELATION PLOT

Correlate Slmap^em1(IMPC)J/Mmjax -/+ with genotype: