JaxKOMP-EAP
effect sizes: Pacrgem1(IMPC)J -/+
Gene Pacrg
There is currently no JaxKOMP-EAP numeric effect size data in MPD for this genotype
However there is raw data for this genotype. Average number of mice tested: None ♀ 2.1 ♂
MULTIPLE (NUMERIC) TRAIT PROFILE PLOT — Early Adult Phenotyping study (EAP)
In this plot, data points are the computed genotype effect size vs. C57BL/6NJ controls,
for all measured numeric phenotypes in
JaxKOMP-EAP
Procedure |
JaxKOMP-EAP Trait |
Trait Effect |
Trait Effect SE |
Trait Effect RankZ |
Adjusted p-value |
Unadjusted p-value |
|---|---|---|---|---|---|---|
MULTIPLE (CATEGORICAL) TRAIT PROFILE PLOT — Early Adult Phenotyping study (EAP)
In this plot, data points are the computed genotype effect % vs. C57BL/6NJ controls,
for all measured categorical phenotypes in
JaxKOMP-EAP
Procedure |
JaxKOMP-EAP Trait |
Sex |
Trait Effect |
P-value |
|---|---|---|---|---|
| eye morphology | anterior chamber depth | males | 0.0 % | 1.0 |
| eye morphology | anterior chamber depth | both | 1.0 % | 1.0 |
| eye morphology | bulging eye | males | 0.0 % | 1.0 |
| eye morphology | bulging eye | both | 1.0 % | 1.00 |
| eye morphology | cornea | males | 2.0 % | 1.0 |
| eye morphology | cornea | both | 3.0 % | 1.00 |
| eye morphology | cornea opacity | males | 1.0 % | 1.0 |
| eye morphology | cornea opacity | both | 3.0 % | 1.00 |
| eye morphology | cornea vascularization | males | 1.0 % | 1.0 |
| eye morphology | cornea vascularization | both | 2.0 % | 1.00 |
| eye morphology | corneal deposits | males | 1.0 % | 1.0 |
| eye morphology | corneal deposits | both | 1.0 % | 1.00 |
| eye morphology | corneal mineralization | males | 1.0 % | 1.0 |
| eye morphology | corneal mineralization | both | 1.0 % | 1.00 |
| eye morphology | corneal scleralization | males | 1.0 % | 1.0 |
| eye morphology | corneal scleralization | both | 2.0 % | 1.00 |
| eye morphology | corneal ulcer | males | 1.0 % | 1.0 |
| eye morphology | corneal ulcer | both | 1.0 % | 1.00 |
| eye morphology | eye closure | males | 0.0 % | 1.0 |
| eye morphology | eye closure | both | 1.0 % | 1.00 |
| eye morphology | eye hemorrhage or blood presence | males | 1.0 % | 1.0 |
| eye morphology | eye hemorrhage or blood presence | both | 1.0 % | 1.00 |
| eye morphology | eyelid morphology | males | 0.0 % | 1.0 |
| eye morphology | eyelid morphology | both | 1.0 % | 1.00 |
| eye morphology | eyes (present, absent) | males | 0.0 % | 1.0 |
| eye morphology | eyes (present, absent) | both | 0.0 % | 1.00 |
| eye morphology | fusion between cornea and lens | males | 2.0 % | 1.0 |
| eye morphology | fusion between cornea and lens | both | 3.0 % | 1.00 |
| eye morphology | iris pigmentation | males | 1.0 % | 1.0 |
| eye morphology | iris pigmentation | both | 2.0 % | 1.00 |
| eye morphology | iris transillumination | males | 1.0 % | 1.0 |
| eye morphology | iris transillumination | both | 1.0 % | 1.00 |
| eye morphology | irispupil | males | 3.0 % | 1.0 |
| eye morphology | irispupil | both | 3.0 % | 1.00 |
| eye morphology | lacrimation | males | 2.0 % | 1.0 |
| eye morphology | lacrimation | both | 3.0 % | 1.00 |
| eye morphology | lens | males | 8.0 % | 1.0 |
| eye morphology | lens | both | 9.0 % | 1.00 |
| eye morphology | lens opacity | males | 48.0 % | 0.109 |
| eye morphology | lens opacity | both | 47.0 % | 0.141 |
| eye morphology | narrow eye opening | males | 1.0 % | 1.0 |
| eye morphology | narrow eye opening | both | 1.0 % | 1.00 |
| eye morphology | optic disc | males | 2.0 % | 1.0 |
| eye morphology | optic disc | both | 3.0 % | 1.00 |
| eye morphology | persistence of hyaloid vascular system | males | 5.0 % | 1.0 |
| eye morphology | persistence of hyaloid vascular system | both | 9.0 % | 1.00 |
| eye morphology | pupil dilation | males | 1.0 % | 1.0 |
| eye morphology | pupil dilation | both | 2.0 % | 1.00 |
| eye morphology | pupil light response | males | 1.0 % | 1.0 |
| eye morphology | pupil light response | both | 2.0 % | 1.00 |
| eye morphology | pupil position | males | 3.0 % | 1.0 |
| eye morphology | pupil position | both | 4.0 % | 1.00 |
| eye morphology | pupil shape | males | 2.0 % | 1.0 |
| eye morphology | pupil shape | both | 3.0 % | 1.00 |
| eye morphology | retina | males | 16.0 % | 1.0 |
| eye morphology | retina | both | 13.0 % | 1.00 |
| eye morphology | retinal blood vessels | males | 2.0 % | 1.0 |
| eye morphology | retinal blood vessels | both | 3.0 % | 1.00 |
| eye morphology | retinal blood vessels pattern | males | 2.0 % | 1.0 |
| eye morphology | retinal blood vessels pattern | both | 4.0 % | 1.00 |
| eye morphology | retinal blood vessels structure | males | 2.0 % | 1.0 |
| eye morphology | retinal blood vessels structure | both | 3.0 % | 1.00 |
| eye morphology | retinal pigmentation | males | 14.0 % | 1.0 |
| eye morphology | retinal pigmentation | both | 13.0 % | 1.00 |
| eye morphology | retinal structure | males | 2.0 % | 1.0 |
| eye morphology | retinal structure | both | 3.0 % | 1.00 |
| eye morphology | synechia | males | 2.0 % | 1.0 |
| eye morphology | synechia | both | 3.0 % | 1.00 |
| eye morphology | vitreous | males | 2.0 % | 1.0 |
| eye morphology | vitreous | both | 3.0 % | 1.00 |
| SHIRPA | activity body position | males | 2.0 % | 1.0 |
| SHIRPA | activity body position | both | 1.0 % | 1.00 |
| SHIRPA | aggression | males | 1.0 % | 1.0 |
| SHIRPA | aggression | both | 1.0 % | 1.0 |
| SHIRPA | body length | males | 0.0 % | 1.0 |
| SHIRPA | body length | both | 0.0 % | 1.0 |
| SHIRPA | body position | males | 1.0 % | 1.0 |
| SHIRPA | body position | both | 0.0 % | 1.00 |
| SHIRPA | body thickness | males | 0.0 % | 1.0 |
| SHIRPA | body thickness | both | 0.0 % | 1.0 |
| SHIRPA | coat color abdomen | males | 4.0 % | 1.0 |
| SHIRPA | coat color abdomen | both | 4.0 % | 1.0 |
| SHIRPA | coat color back | males | 0.0 % | 1.0 |
| SHIRPA | coat color back | both | 0.0 % | 1.0 |
| SHIRPA | coat color head | males | 0.0 % | 1.0 |
| SHIRPA | coat color head | both | 0.0 % | 1.00 |
| SHIRPA | coat color pattern abdomen | males | 1.0 % | 1.0 |
| SHIRPA | coat color pattern abdomen | both | 1.0 % | 1.0 |
| SHIRPA | coat color pattern back | males | 0.0 % | 1.0 |
| SHIRPA | coat color pattern back | both | 0.0 % | 1.0 |
| SHIRPA | coat color pattern head | males | 0.0 % | 1.0 |
| SHIRPA | coat color pattern head | both | 0.0 % | 1.0 |
| SHIRPA | coat hair abdomen texture appearance | males | 2.0 % | 1.0 |
| SHIRPA | coat hair abdomen texture appearance | both | 2.0 % | 1.00 |
| SHIRPA | coat hair back texture appearance | males | 0.0 % | 1.0 |
| SHIRPA | coat hair back texture appearance | both | 0.0 % | 1.00 |
| SHIRPA | coat hair distribution abdomen | males | 1.0 % | 1.0 |
| SHIRPA | coat hair distribution abdomen | both | 1.0 % | 1.0 |
| SHIRPA | coat hair distribution back | males | 0.0 % | 1.0 |
| SHIRPA | coat hair distribution back | both | 0.0 % | 1.0 |
| SHIRPA | coat hair distribution head | males | 1.0 % | 1.0 |
| SHIRPA | coat hair distribution head | both | 1.0 % | 1.00 |
| SHIRPA | coat hair head texture appearance | males | 0.0 % | 1.0 |
| SHIRPA | coat hair head texture appearance | both | 0.0 % | 1.0 |
| SHIRPA | contact righting | males | 5.0 % | 1.0 |
| SHIRPA | contact righting | both | 5.0 % | 1.00 |
| SHIRPA | ear morphology | males | 0.0 % | 1.0 |
| SHIRPA | ear morphology | both | 0.0 % | 1.0 |
| SHIRPA | fat distribution | males | 0.0 % | 1.0 |
| SHIRPA | fat distribution | both | 0.0 % | 1.0 |
| SHIRPA | forelimb digit number | males | 0.0 % | 1.0 |
| SHIRPA | forelimb digit number | both | 0.0 % | 1.00 |
| SHIRPA | forelimb digit position | males | 0.0 % | 1.0 |
| SHIRPA | forelimb digit position | both | 0.0 % | 1.0 |
| SHIRPA | forelimb digit shape | males | 0.0 % | 1.0 |
| SHIRPA | forelimb digit shape | both | 0.0 % | 1.0 |
| SHIRPA | forelimb digit size | males | 0.0 % | 1.0 |
| SHIRPA | forelimb digit size | both | 0.0 % | 1.0 |
| SHIRPA | forelimb footpads | males | 0.0 % | 1.0 |
| SHIRPA | forelimb footpads | both | 0.0 % | 1.0 |
| SHIRPA | forelimb nail length | males | 0.0 % | 1.0 |
| SHIRPA | forelimb nail length | both | 0.0 % | 1.0 |
| SHIRPA | forelimb nail number | males | 0.0 % | 1.0 |
| SHIRPA | forelimb nail number | both | 0.0 % | 1.0 |
| SHIRPA | forelimb nail position | males | 0.0 % | 1.0 |
| SHIRPA | forelimb nail position | both | 0.0 % | 1.0 |
| SHIRPA | forelimb nail shape | males | 0.0 % | 1.0 |
| SHIRPA | forelimb nail shape | both | 0.0 % | 1.0 |
| SHIRPA | forelimbs position | males | 0.0 % | 1.0 |
| SHIRPA | forelimbs position | both | 0.0 % | 1.0 |
| SHIRPA | forelimbs shape | males | 0.0 % | 1.0 |
| SHIRPA | forelimbs shape | both | 0.0 % | 1.0 |
| SHIRPA | forelimbs size | males | 0.0 % | 1.0 |
| SHIRPA | forelimbs size | both | 0.0 % | 1.0 |
| SHIRPA | forepaw position | males | 0.0 % | 1.0 |
| SHIRPA | forepaw position | both | 0.0 % | 1.0 |
| SHIRPA | forepaw shape | males | 0.0 % | 1.0 |
| SHIRPA | forepaw shape | both | 0.0 % | 1.0 |
| SHIRPA | forepaw size | males | 0.0 % | 1.0 |
| SHIRPA | forepaw size | both | 0.0 % | 1.0 |
| SHIRPA | gait (fluidity) | males | 0.0 % | 1.0 |
| SHIRPA | gait (fluidity) | both | 0.0 % | 1.0 |
| SHIRPA | genitalia morphology | males | 0.0 % | 1.0 |
| SHIRPA | genitalia morphology | both | 0.0 % | 1.00 |
| SHIRPA | genitalia presence | males | 0.0 % | 1.0 |
| SHIRPA | genitalia presence | both | 0.0 % | 1.0 |
| SHIRPA | genitalia size | males | 0.0 % | 1.0 |
| SHIRPA | genitalia size | both | 0.0 % | 1.00 |
| SHIRPA | head bobbing | males | 0.0 % | 1.0 |
| SHIRPA | head bobbing | both | 0.0 % | 1.0 |
| SHIRPA | head morphology | males | 0.0 % | 1.0 |
| SHIRPA | head morphology | both | 0.0 % | 1.0 |
| SHIRPA | head size | males | 0.0 % | 1.0 |
| SHIRPA | head size | both | 0.0 % | 1.00 |
| SHIRPA | hindlimb digit number | males | 0.0 % | 1.0 |
| SHIRPA | hindlimb digit number | both | 0.0 % | 1.00 |
| SHIRPA | hindlimb digit position | males | 0.0 % | 1.0 |
| SHIRPA | hindlimb digit position | both | 0.0 % | 1.0 |
| SHIRPA | hindlimb digit shape | males | 0.0 % | 1.0 |
| SHIRPA | hindlimb digit shape | both | 0.0 % | 1.0 |
| SHIRPA | hindlimb digit size | males | 0.0 % | 1.0 |
| SHIRPA | hindlimb digit size | both | 0.0 % | 1.00 |
| SHIRPA | hindlimb nail length | males | 0.0 % | 1.0 |
| SHIRPA | hindlimb nail length | both | 0.0 % | 1.00 |
| SHIRPA | hindlimb nail number | males | 1.0 % | 1.0 |
| SHIRPA | hindlimb nail number | both | 0.0 % | 1.00 |
| SHIRPA | hindlimb nail position | males | 0.0 % | 1.0 |
| SHIRPA | hindlimb nail position | both | 0.0 % | 1.0 |
| SHIRPA | hindlimb nail shape | males | 0.0 % | 1.0 |
| SHIRPA | hindlimb nail shape | both | 0.0 % | 1.0 |
| SHIRPA | hindlimbs footpads | males | 0.0 % | 1.0 |
| SHIRPA | hindlimbs footpads | both | 0.0 % | 1.0 |
| SHIRPA | hindlimbs position | males | 0.0 % | 1.0 |
| SHIRPA | hindlimbs position | both | 0.0 % | 1.0 |
| SHIRPA | hindlimbs shape | males | 0.0 % | 1.0 |
| SHIRPA | hindlimbs shape | both | 0.0 % | 1.0 |
| SHIRPA | hindlimbs size | males | 0.0 % | 1.0 |
| SHIRPA | hindlimbs size | both | 0.0 % | 1.0 |
| SHIRPA | hindpaw position | males | 0.0 % | 1.0 |
| SHIRPA | hindpaw position | both | 0.0 % | 1.0 |
| SHIRPA | hindpaw shape | males | 0.0 % | 1.0 |
| SHIRPA | hindpaw shape | both | 0.0 % | 1.0 |
| SHIRPA | hindpaw size | males | 0.0 % | 1.0 |
| SHIRPA | hindpaw size | both | 0.0 % | 1.0 |
| SHIRPA | limb grasp | males | 6.0 % | 1.0 |
| SHIRPA | limb grasp | both | 7.0 % | 1.00 |
| SHIRPA | lower lip morphology | males | 0.0 % | 1.0 |
| SHIRPA | lower lip morphology | both | 0.0 % | 1.0 |
| SHIRPA | lower teeth appearance | males | 0.0 % | 1.0 |
| SHIRPA | lower teeth appearance | both | 0.0 % | 1.0 |
| SHIRPA | mouth morphology | males | 0.0 % | 1.0 |
| SHIRPA | mouth morphology | both | 0.0 % | 1.0 |
| SHIRPA | salivation | males | 0.0 % | 1.0 |
| SHIRPA | salivation | both | 0.0 % | 1.0 |
| SHIRPA | skin color back paws | males | 0.0 % | 1.0 |
| SHIRPA | skin color back paws | both | 0.0 % | 1.0 |
| SHIRPA | skin color ear | males | 0.0 % | 1.0 |
| SHIRPA | skin color ear | both | 0.0 % | 1.0 |
| SHIRPA | skin color front paws | males | 0.0 % | 1.0 |
| SHIRPA | skin color front paws | both | 0.0 % | 1.0 |
| SHIRPA | skin color snout | males | 0.0 % | 1.0 |
| SHIRPA | skin color snout | both | 0.0 % | 1.0 |
| SHIRPA | skin color tail | males | 0.0 % | 1.0 |
| SHIRPA | skin color tail | both | 0.0 % | 1.0 |
| SHIRPA | skin color whole body | males | 0.0 % | 1.0 |
| SHIRPA | skin color whole body | both | 0.0 % | 1.0 |
| SHIRPA | skin texture back paw | males | 0.0 % | 1.0 |
| SHIRPA | skin texture back paw | both | 0.0 % | 1.0 |
| SHIRPA | skin texture ear | males | 0.0 % | 1.0 |
| SHIRPA | skin texture ear | both | 0.0 % | 1.0 |
| SHIRPA | skin texture front paws | males | 0.0 % | 1.0 |
| SHIRPA | skin texture front paws | both | 0.0 % | 1.0 |
| SHIRPA | skin texture snout | males | 0.0 % | 1.0 |
| SHIRPA | skin texture snout | both | 0.0 % | 1.0 |
| SHIRPA | skin texture tail | males | 0.0 % | 1.0 |
| SHIRPA | skin texture tail | both | 0.0 % | 1.0 |
| SHIRPA | skin texture whole body | males | 0.0 % | 1.0 |
| SHIRPA | skin texture whole body | both | 0.0 % | 1.0 |
| SHIRPA | snout size | males | 1.0 % | 1.00 |
| SHIRPA | snout size | both | 0.0 % | 1.0 |
| SHIRPA | startle response | males | 0.0 % | 1.0 |
| SHIRPA | startle response | both | 0.0 % | 1.0 |
| SHIRPA | tail curvature | males | 0.0 % | 1.0 |
| SHIRPA | tail curvature | both | 0.0 % | 1.0 |
| SHIRPA | tail elevation | males | 48.0 % | 0.0375 |
| SHIRPA | tail elevation | both | 49.0 % | 0.0279 |
| SHIRPA | tail length | males | 0.0 % | 1.0 |
| SHIRPA | tail length | both | 0.0 % | 1.0 |
| SHIRPA | tail morphology | males | 0.0 % | 1.0 |
| SHIRPA | tail morphology | both | 0.0 % | 1.0 |
| SHIRPA | tail presence | males | 0.0 % | 1.0 |
| SHIRPA | tail presence | both | 0.0 % | 1.0 |
| SHIRPA | tail shape | males | 0.0 % | 1.0 |
| SHIRPA | tail shape | both | 0.0 % | 1.0 |
| SHIRPA | tail thickness | males | 0.0 % | 1.0 |
| SHIRPA | tail thickness | both | 0.0 % | 1.0 |
| SHIRPA | teeth presence | males | 0.0 % | 1.0 |
| SHIRPA | teeth presence | both | 0.0 % | 1.0 |
| SHIRPA | transfer arousal | males | 2.0 % | 1.0 |
| SHIRPA | transfer arousal | both | 1.0 % | 1.0 |
| SHIRPA | tremor | males | 0.0 % | 1.0 |
| SHIRPA | tremor | both | 0.0 % | 1.0 |
| SHIRPA | trunk curl | males | 0.0 % | 1.0 |
| SHIRPA | trunk curl | both | 0.0 % | 1.0 |
| SHIRPA | unexpected behaviors (circling, head bobbing, jumping, retropulsion) | males | 0.0 % | 1.0 |
| SHIRPA | unexpected behaviors (circling, head bobbing, jumping, retropulsion) | both | 0.0 % | 1.00 |
| SHIRPA | upper lip morphology | males | 0.0 % | 1.0 |
| SHIRPA | upper lip morphology | both | 0.0 % | 1.0 |
| SHIRPA | upper teeth appearance | males | 0.0 % | 1.0 |
| SHIRPA | upper teeth appearance | both | 0.0 % | 1.0 |
| SHIRPA | vibrissae appearance | males | 1.0 % | 1.0 |
| SHIRPA | vibrissae appearance | both | 1.0 % | 1.00 |
| SHIRPA | vibrissae presence | males | 1.0 % | 1.00 |
| SHIRPA | vibrissae presence | both | 2.0 % | 1.0 |
| SHIRPA | vocalization | males | 2.0 % | 1.0 |
| SHIRPA | vocalization | both | 2.0 % | 1.00 |
