MPD: JaxKOMP-EAP genotype: Rev3l<sup>tm1b(EUCOMM)Hmgu</sup> -/+

JaxKOMP-EAP effect sizes: Rev3l^{tm1b(EUCOMM)Hmgu} -/+ Gene Rev3l

MULTIPLE (NUMERIC) TRAIT PROFILE PLOT — Early Adult Phenotyping study (EAP)

In this plot, data points are the computed genotype effect size vs. C57BL/6NJ controls, for all measured numeric phenotypes in JaxKOMP-EAP

Dimensions Width: × Height: px

Plot Options Group by Procedure Standard Error Show Effect Sizes RankZ

Significance Threshold p-Value Threshold Adjusted Unadjusted

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Procedure	JaxKOMP-EAP Trait	Trait Effect	Trait Effect SE	Trait Effect RankZ	Adjusted p-value	Unadjusted p-value

ABR test	auditory brainstem response (ABR) threshold, sound pressure level, 6 kHz pip	3.8772	3.8448	0.87282	0.740	0.330
ABR test	auditory brainstem response (ABR) threshold, sound pressure level, 12 kHz pip	-2.8510	4.3201	-0.63282	0.846	0.520
ABR test	auditory brainstem response (ABR) threshold, sound pressure level, 18 kHz pip	2.8042	5.6559	0.41416	0.871	0.628
ABR test	auditory brainstem response (ABR) threshold, sound pressure level, 24 kHz pip	4.9868	5.5566	0.67317	0.736	0.384
ABR test	auditory brainstem response (ABR) threshold, sound pressure level, 30 kHz pip	3.3333	2.7041	0.50742	0.631	0.237
body composition	body length	0.10546	0.039285	1.4913	0.0896	0.0107
body composition	body weight (at time of DXA)	0.61550	0.49195	0.59479	0.434	0.218
body composition	bone area, whole body scan, head excluded	0.21705	0.11625	1.1307	0.268	0.0696
body composition	bone mineral content of whole body scan, head excluded	0.012397	0.0080605	0.86163	0.377	0.132
body composition	bone mineral content to body weight ratio	0.00055064	0.00034298	0.92680	0.340	0.117
body composition	bone mineral density of whole body scan, head excluded	0.00025257	0.00036899	0.29305	0.749	0.498
body composition	fat tissue mass of whole body scan, head excluded	-0.10270	0.22405	-0.18120	0.824	0.649
body composition	fat tissue mass to body weight ratio	-0.0042080	0.0081436	-0.13420	0.791	0.608
body composition	lean tissue mass of whole body scan, head excluded	0.065123	0.21360	-0.012288	0.906	0.762
body composition	lean tissue mass to body weight ratio	0.0019981	0.0074396	0.047145	0.899	0.790
body composition	percent fat, whole body scan, head excluded	-0.38750	0.78741	-0.12318	0.807	0.625
body composition	ratio of soft-tissue attenuation coefficients	0.00042481	0.00087430	0.12346	0.808	0.630
body composition	tissue area	0.051220	0.12398	0.36611	0.879	0.682
body composition	total tissue mass, whole body scan, head excluded	-0.051087	0.16312	-0.34533	0.873	0.756
clinical blood chemistry	alanine transaminase (plasma ALT)	-12.484	8.9090	-1.0157	0.541	0.172
clinical blood chemistry	albumin (plasma Alb)	-0.18939	0.39215	-0.23161	0.856	0.633
clinical blood chemistry	alkaline phosphatase (plasma ALP)	-9.1989	13.616	-1.9431	0.724	0.505
clinical blood chemistry	aspartate transaminase (plasma AST)	-32.561	20.935	-1.3992	0.438	0.131
clinical blood chemistry	aspartate transaminase to alanine transaminase ratio (plasma AST:ALT)	-0.32250	0.25423	-0.98880	0.618	0.215
clinical blood chemistry	blood urea nitrogen (BUN)	-6.4394	1.2394	-2.0193	0.00134	0.0000147
clinical blood chemistry	calcium (plasma Ca)	0.16731	0.093983	1.4526	0.260	0.0859
clinical blood chemistry	creatinine (plasma)	-0.091504	0.016779	-1.6018	0.000736	0.00000720
clinical blood chemistry	glucose (plasma GLU, no fast)	25.514	11.230	1.2864	0.112	0.0307
clinical blood chemistry	HDL cholesterol (plasma HDL)	0.98408	2.2997	-0.090100	0.872	0.672
clinical blood chemistry	HDL cholesterol to total cholesterol ratio	-0.014766	0.010440	-0.95051	0.497	0.168
clinical blood chemistry	phosphorus (plasma phosphate)	-0.11515	0.29648	-0.23075	0.860	0.701
clinical blood chemistry	total bilirubin (plasma TBIL)	-0.0099234	0.0083818	-0.74292	0.592	0.246
clinical blood chemistry	total cholesterol (plasma CHOL, no fast)	2.9489	2.5533	0.29795	0.577	0.258
clinical blood chemistry	total protein (plasma TP)	-0.31566	0.62794	-0.31039	0.804	0.619
clinical blood chemistry	triglyceride (plasma TG, no fast)	2.8784	6.7214	0.37486	0.846	0.672
EKG	duration of PQ interval	1.5778	0.76064	1.7485	0.513	0.0512
EKG	duration of PR interval	1.8237	0.77347	1.8390	0.469	0.0287
EKG	duration of QRS interval	-0.095401	0.35661	-0.40799	0.976	0.792
EKG	duration of QT interval	0.80831	0.70987	0.94619	0.748	0.269
EKG	duration of QTC interval, calculated by dividing QT interval by square root of preceding RR interval	0.24587	0.74653	0.33245	0.970	0.745
EKG	duration of RR interval	2.4990	1.5204	1.4703	0.522	0.116
EKG	duration of ST interval	0.74265	0.79559	0.97820	0.792	0.362
EKG	heart rate coefficient of variation (signal intensity)	1.4371	1.3531	1.2475	0.863	0.301
EKG	heart rate variability, mean of differences between sequential beats; beats per min	9.0562	9.6321	1.0991	0.853	0.358
EKG	heart rate, beats per min	-21.764	12.123	-1.5724	0.443	0.0878
EKG	mean R amplitude, mean amplitude of signal measured from isoelectric line to peak of QRS	0.10225	0.076394	0.68401	0.573	0.196
EKG	mean SR amplitude, mean amplitude of signal measured from signal minimum line to peak of QRS	0.12638	0.10053	0.62407	0.596	0.223
EKG	number of signals	8.6875	3.8985	1.4763	0.460	0.0375
EKG	proportion of number pairs of successive beat-to-beat intervals that exceed 50 ms	5.1215	4.0667	1.0049	0.814	0.222
EKG	QT dispersion, measured as inter-lead variability of QT intervals	-1.2500	3.5131	-0.34098	0.968	0.726
EKG	QTc dispersion, calculated as rate-corrected QT dispersion	-2.1076	4.1057	-0.58600	0.947	0.614
EKG	root mean square of successive differences of neighboring RR intervals	-1.6541	2.0829	-0.79321	0.884	0.436
glucose tolerance test	amount glucose injected	0.28674	1.7587	0.45754	0.958	0.871
glucose tolerance test	plasma glucose, 0min	-9.3055	6.3255	-1.0409	0.333	0.148
glucose tolerance test	plasma glucose, 15min	-1.1414	23.500	0.075573	0.985	0.961
glucose tolerance test	plasma glucose, 30min	-0.18750	22.332	0.13494	0.997	0.993
glucose tolerance test	plasma glucose, 60min	-31.525	20.846	-1.2032	0.430	0.137
glucose tolerance test	plasma glucose, 120min	-2.4532	10.628	-0.30963	0.933	0.818
grip strength	body weight (at time of grip strength test)	0.74015	0.38979	0.89145	0.177	0.0659
grip strength	forelimb and hindlimb grip strength (mean of trials), average	-8.2101	8.6361	-0.35437	0.561	0.348
grip strength	forelimb and hindlimb grip strength (mean of trials), average normalized to bw	-0.49182	0.37399	-0.53912	0.392	0.197
grip strength	forelimb and hindlimb grip strength by trial, trial1	3.4640	10.562	0.48122	0.893	0.745
grip strength	forelimb and hindlimb grip strength by trial, trial2	1.3235	9.7384	0.31291	0.948	0.893
grip strength	forelimb and hindlimb grip strength by trial, trial3	-20.069	10.166	-1.0462	0.239	0.0565
grip strength	forelimb grip strength (mean of trials), average	0.91750	5.3703	0.40747	0.950	0.865
grip strength	forelimb grip strength (mean of trials), average normalized to bw	0.017540	0.28214	0.28709	0.981	0.951
grip strength	forelimb grip strength by trial, trial1	7.1656	6.6216	1.0846	0.638	0.287
grip strength	forelimb grip strength by trial, trial2	-3.3532	7.7269	-0.14281	0.878	0.667
grip strength	forelimb grip strength by trial, trial3	-1.5749	6.8908	0.10184	0.929	0.821
heart weight	heart weight, normalized to body weight	0.0029367	0.12306	-0.44610	0.989	0.981
heart weight	heart weight, weight	0.73062	2.7500	-0.27714	0.887	0.792
hematology	basophil differential (percent of total WBC)	-0.031440	0.058451	-0.45293	0.864	0.595
hematology	calculated hemoglobin (cHGB)	0.32203	0.16983	0.73351	0.277	0.0687
hematology	eosinophil differential (percent of total WBC)	-0.28958	0.31819	-0.70616	0.751	0.371
hematology	hematocrit (HCT)	-0.33024	0.46394	-0.68051	0.715	0.483
hematology	hemoglobin concentration distribution width (HDW)	0.021887	0.018243	0.60098	0.550	0.241
hematology	large unstained cells (percent of total WBC)	-0.069814	0.085268	-0.46917	0.737	0.420
hematology	lymphocyte differential (percent of total WBC)	-0.18884	0.82395	-0.13021	0.922	0.820
hematology	mean corpuscular hemoglobin (CHr)	-0.0019215	0.073399	0.011752	0.990	0.979
hematology	mean platelet volume (MPV)	0.090460	0.071828	0.42622	0.436	0.219
hematology	mean RBC corpuscular hemoglobin (MCH)	-0.0022677	0.19268	-0.035717	0.994	0.991
hematology	mean RBC corpuscular hemoglobin concentration (MCHC)	0.76582	0.39671	1.3465	0.346	0.0641
hematology	mean RBC corpuscular volume (MCV)	-1.1912	0.31764	-1.6277	0.00949	0.000854
hematology	measured hemoglobin (mHGB)	0.32704	0.21611	0.63928	0.425	0.142
hematology	monocyte differential (percent of total WBC)	-0.014978	0.13852	0.16060	0.969	0.915
hematology	neutrophil differential (percent of total WBC)	0.36269	0.82284	0.20926	0.822	0.663
hematology	platelet count (PLT; units per volume x 10³)	73.385	47.049	0.98429	0.495	0.130
hematology	RBC corpuscular distribution width (RDW)	0.25125	0.097928	0.86489	0.122	0.0162
hematology	RBC corpuscular hemoglobin concentration mean (CHCM)	0.77610	0.24593	1.7013	0.0393	0.00391
hematology	red blood cell count (RBC; per volume x 10⁶)	0.19623	0.10627	0.51594	0.301	0.0758
hematology	reticulocyte count (Retic; units per volume x 10⁹)	7.5636	10.270	0.42371	0.794	0.470
hematology	reticulocyte differential (percent of total RBC)	0.043522	0.10108	0.40514	0.869	0.671
hematology	white blood cell count (WBC; units per volume x 10³)	1.1809	0.69124	0.95585	0.251	0.0990
holeboard	number of hole pokes by individual hole number, 20 min test, 1	-0.45000	0.72947	-0.37942	0.852	0.542
holeboard	number of hole pokes by individual hole number, 20 min test, 2	-0.55941	0.41295	-0.73785	0.720	0.186
holeboard	number of hole pokes by individual hole number, 20 min test, 3	-0.072760	0.51833	-0.010972	0.962	0.889
holeboard	number of hole pokes by individual hole number, 20 min test, 4	-0.013614	0.50880	0.078571	0.992	0.979
holeboard	number of hole pokes by individual hole number, 20 min test, 5	0.11647	0.53515	0.30248	0.967	0.829
holeboard	number of hole pokes by individual hole number, 20 min test, 6	-0.075000	0.30899	-0.16436	0.969	0.810
holeboard	number of hole pokes by individual hole number, 20 min test, 7	-0.59352	0.41133	-1.6935	0.738	0.160
holeboard	number of hole pokes by individual hole number, 20 min test, 8	0.24269	0.52625	0.53703	0.930	0.648
holeboard	number of hole pokes by individual hole number, 20 min test, 9	-0.15328	0.53741	-0.20410	0.964	0.777
holeboard	number of hole pokes by individual hole number, 20 min test, 10	-0.17029	0.27613	-0.41593	0.910	0.542
holeboard	number of hole pokes by individual hole number, 20 min test, 11	-0.68928	0.25402	-1.7942	0.491	0.0109
holeboard	number of hole pokes by individual hole number, 20 min test, 12	0.16909	0.36672	0.40008	0.926	0.648
holeboard	number of hole pokes by individual hole number, 20 min test, 13	-1.0276	1.0056	-0.91917	0.722	0.315
holeboard	number of hole pokes by individual hole number, 20 min test, 14	-0.42500	0.50379	-0.60716	0.794	0.406
holeboard	number of hole pokes by individual hole number, 20 min test, 15	-1.0518	0.45221	-1.6275	0.374	0.0270
holeboard	number of hole pokes by individual hole number, 20 min test, 16	-1.4000	0.60340	-1.2104	0.333	0.0273
holeboard	total number of hole pokes, 20 min test	-7.3106	3.9060	-0.95316	0.294	0.0710
light / dark	fecal boli count, 20 min test	-1.7011	0.93184	-1.8700	0.437	0.0739
light / dark	latency to enter dark zone, 20 min test	45.064	62.515	0.68899	0.822	0.474
light / dark	number of transitions between light and dark zones, 20 min test	-9.2463	7.3160	-0.83356	0.533	0.212
light / dark	percentage of total time in dark zone, 20 min test	2.1134	4.3317	0.51388	0.869	0.628
light / dark	percentage of total time in light zone, 20 min test	-2.1134	4.3317	-0.51697	0.868	0.628
light / dark	time mobile in dark zone, 20 min test	4.9725	14.913	0.24164	0.890	0.740
light / dark	time mobile in light zone, 20 min test	-0.46532	10.555	-0.26958	0.983	0.965
light / dark	time spent in dark zone, 20 min test	-7.3043	53.317	0.11381	0.965	0.892
light / dark	time spent in light zone, 20 min test	7.3043	53.317	-0.11381	0.965	0.892
open field	average speed in center of arena, 20 min test	-0.16757	0.29559	-0.39321	0.819	0.573
open field	average speed in periphery of arena, 20 min test	0.52559	0.15065	1.3213	0.0115	0.00102
open field	distance traveled habituation ratio, 20 min test	25.689	8.3950	1.8731	0.0587	0.00355
open field	distance traveled in center of arena, 20 min test	-69.341	93.267	-0.81027	0.691	0.461
open field	distance traveled in periphery of arena, 20 min test	540.60	174.68	1.4826	0.0314	0.00325
open field	distance traveled slope, 20 min test	25.793	8.1839	1.9851	0.0507	0.00274
open field	distance traveled, 20 min test, 1st 5min	39.691	67.380	-0.0073843	0.774	0.558
open field	distance traveled, 20 min test, 2nd 5min	85.975	45.126	0.45939	0.222	0.0625
open field	distance traveled, 20 min test, 3rd 5min	161.56	56.990	1.2276	0.0507	0.00660
open field	distance traveled, 20 min test, 4th 5min	251.31	68.841	1.8074	0.00963	0.000635
open field	number of clockwise revolution episodes, 20 min test	3.6000	1.3562	1.4061	0.117	0.0106
open field	number of counter-clockwise revolution episodes, 20 min test	2.4167	1.2613	0.83856	0.271	0.0611
open field	number of fecal boli, 20 min test	-3.4046	0.97221	-2.1571	0.0365	0.000982
open field	number of rears in 5 min bins, 20 min test, 1st 5min	3.0180	2.3264	0.61902	0.462	0.200
open field	number of rears in 5 min bins, 20 min test, 2nd 5min	1.5114	2.6150	0.026184	0.779	0.566
open field	number of rears in 5 min bins, 20 min test, 3rd 5min	2.5423	2.7152	0.30894	0.624	0.354
open field	number of rears in 5 min bins, 20 min test, 4th 5min	1.3446	2.9026	-0.055747	0.820	0.645
open field	percentage of total time in center of arena, 20 min test	-1.5368	2.1762	-0.58724	0.762	0.483
open field	percentage of total time in center of arena, slope, 20 min test	-0.24533	1.3617	-0.014098	0.961	0.858
open field	percentage of total time in center, habituation ratio, 20 min test	-0.45822	1.3881	-0.13399	0.937	0.743
open field	percentage of total time in corners of arena, 20 min test	-0.57325	3.6752	0.20757	0.955	0.877
open field	percentage of total time in corners, habituation ratio, 20 min test	1.5653	1.8536	0.42533	0.843	0.402
open field	percentage of total time in corners, slope, 20 min test	1.2406	1.8295	0.29209	0.885	0.501
open field	permanence time in center of arena, 20 min test	-18.439	26.114	-0.58724	0.761	0.483
open field	permanence time in corners of arena, 20 min test	-6.8462	44.102	0.20757	0.955	0.877
open field	permanence time in periphery of arena, 20 min test	18.439	26.118	0.58883	0.762	0.484
open field	total distance traveled, 20 min test	559.68	191.87	1.0365	0.0355	0.00528
open field	total number of rears, 20 min test	8.4072	9.1856	0.24476	0.613	0.364
open field	whole arena average speed, 20 min test	0.46649	0.15985	1.0388	0.0356	0.00526
open field	whole arena resting time, 20 min test	-46.322	19.218	-0.71682	0.0849	0.0197
open field	whole arena time spent mobile, 20 min test	46.291	19.219	0.94655	0.0859	0.0197
open field	whole arena time spent vertical, 20 min test	4.3197	9.3615	0.22819	0.858	0.646
SHIRPA	locomotor activity (number of squares in the arena the mouse moves into with all four paws in first 30 s of test)	-0.73250	1.6581	-0.13227	0.861	0.661
startle / PPI	average baseline movement during background noise	0.36250	1.3612	0.32436	0.963	0.791
startle / PPI	average of each corrected maximum percent pre-pulse inhibition value	0.0062059	0.066367	-0.053970	0.966	0.926
startle / PPI	average of each corrected percent pre-pulse inhibition value	-0.010233	0.062588	-0.16984	0.943	0.871
startle / PPI	average percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 74dB sound pressure level	-1.3961	6.2973	-0.11303	0.986	0.825
startle / PPI	average percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 78dB sound pressure level	2.2566	6.6387	0.17961	0.912	0.735
startle / PPI	average percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 82dB sound pressure level	3.1797	7.2930	0.23833	0.874	0.665
startle / PPI	average startle response to full pulse (120 dB)	32.042	22.710	0.83923	0.381	0.164
startle / PPI	average startle response to full pulse (120 dB) preceded by pre-pulse, 74dB sound pressure level	35.873	24.706	0.87977	0.361	0.153
startle / PPI	average startle response to full pulse (120 dB) preceded by pre-pulse, 78dB sound pressure level	23.554	19.665	0.68907	0.457	0.237
startle / PPI	average startle response to full pulse (120 dB) preceded by pre-pulse, 82dB sound pressure level	12.535	18.393	0.50473	0.684	0.499
startle / PPI	average startle response to pre-pulse, 74dB sound pressure level	-1.1104	0.76335	-0.74895	0.677	0.152
startle / PPI	average startle response to pre-pulse, 78dB sound pressure level	-1.3919	1.0626	-0.94128	0.713	0.196
startle / PPI	average startle response to pre-pulse, 82dB sound pressure level	-1.4604	1.0380	-0.95888	0.613	0.166
startle / PPI	corrected average percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 74dB sound pressure level	-0.037712	0.069297	-0.30082	0.922	0.589
startle / PPI	corrected average percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 78dB sound pressure level	0.0053164	0.077158	-0.042795	0.987	0.945
startle / PPI	corrected average percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 82dB sound pressure level	0.0016970	0.084588	-0.15909	0.992	0.984
startle / PPI	corrected average startle response to full pulse (120 dB) minus average baseline movement during background noise	31.679	23.021	0.83128	0.398	0.175
startle / PPI	corrected average startle response to pre-pulse and full pulse (120 dB) minus average startle response to same pre-pulse, 74dB sound pressure level	36.983	24.813	0.88391	0.348	0.142
startle / PPI	corrected average startle response to pre-pulse and full pulse (120 dB) minus average startle response to same pre-pulse, 78dB sound pressure level	24.848	19.924	0.72323	0.432	0.218
startle / PPI	corrected average startle response to pre-pulse and full pulse (120 dB) minus average startle response to same pre-pulse, 82dB sound pressure level	13.996	18.412	0.53844	0.649	0.451
startle / PPI	corrected maximum percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 74dB sound pressure level	-0.019152	0.070122	-0.13845	0.965	0.786
startle / PPI	corrected maximum percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 78dB sound pressure level	0.036729	0.081196	0.18042	0.850	0.653
startle / PPI	corrected maximum percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 82dB sound pressure level	0.0010414	0.094928	-0.18042	0.997	0.991
startle / PPI	corrected maximum startle response to full pulse (120 dB) minus maximum baseline movement during background noise	91.292	83.222	0.69798	0.524	0.278
startle / PPI	corrected maximum startle response to pre-pulse and full pulse (120 dB) minus maximum startle response to same pre-pulse, 74dB sound pressure level	106.92	89.054	0.72323	0.474	0.236
startle / PPI	corrected maximum startle response to pre-pulse and full pulse (120 dB) minus maximum startle response to same pre-pulse, 78dB sound pressure level	54.300	73.809	0.49204	0.658	0.465
startle / PPI	corrected maximum startle response to pre-pulse and full pulse (120 dB) minus maximum startle response to same pre-pulse, 82dB sound pressure level	34.723	70.771	0.42050	0.771	0.626
startle / PPI	maximum baseline movement during background noise	0.26666	3.7328	0.19672	0.985	0.943
startle / PPI	maximum percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 74dB sound pressure level	-0.53883	6.6987	-0.028727	1.00	0.936
startle / PPI	maximum percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 78dB sound pressure level	4.7531	7.3443	0.34065	0.791	0.520
startle / PPI	maximum percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 82dB sound pressure level	2.4246	8.5012	0.082058	0.909	0.777
startle / PPI	maximum startle response to full pulse (120 dB)	90.756	82.648	0.70695	0.519	0.277
startle / PPI	maximum startle response to full pulse (120 dB) preceded by pre-pulse, 74dB sound pressure level	105.22	88.727	0.71416	0.482	0.241
startle / PPI	maximum startle response to full pulse (120 dB) preceded by pre-pulse, 78dB sound pressure level	51.606	72.951	0.47628	0.678	0.483
startle / PPI	maximum startle response to full pulse (120 dB) preceded by pre-pulse, 82dB sound pressure level	32.440	70.813	0.39765	0.788	0.649
startle / PPI	maximum startle response to pre-pulse, 74dB sound pressure level	-1.7042	1.8545	-0.44203	0.791	0.363
startle / PPI	maximum startle response to pre-pulse, 78dB sound pressure level	-3.1999	2.7809	-0.88391	0.751	0.255
startle / PPI	maximum startle response to pre-pulse, 82dB sound pressure level	-2.2132	2.4157	-0.62986	0.733	0.364

MULTIPLE (CATEGORICAL) TRAIT PROFILE PLOT — Early Adult Phenotyping study (EAP)

In this plot, data points are the computed genotype effect % vs. C57BL/6NJ controls, for all measured categorical phenotypes in JaxKOMP-EAP

Dimensions Width: × Height: px

Plot Options Group by Procedure

Include Sexes Data Both Females Males

Significance Threshold p-Value Threshold

Download Plot

Procedure	JaxKOMP-EAP Trait	Sex	Trait Effect	P-value

eye morphology	anterior chamber depth	females	1.0 %	1.0
eye morphology	anterior chamber depth	males	0.0 %	1.0
eye morphology	anterior chamber depth	both	1.0 %	1.0
eye morphology	bulging eye	females	1.0 %	1.0
eye morphology	bulging eye	males	0.0 %	1.0
eye morphology	bulging eye	both	1.0 %	1.00
eye morphology	cornea	females	4.0 %	1.0
eye morphology	cornea	males	2.0 %	1.0
eye morphology	cornea	both	3.0 %	1.00
eye morphology	cornea opacity	females	5.0 %	1.00
eye morphology	cornea opacity	males	1.0 %	1.0
eye morphology	cornea opacity	both	3.0 %	1.00
eye morphology	cornea vascularization	females	3.0 %	1.0
eye morphology	cornea vascularization	males	1.0 %	1.0
eye morphology	cornea vascularization	both	2.0 %	1.00
eye morphology	corneal deposits	females	2.0 %	1.0
eye morphology	corneal deposits	males	1.0 %	1.0
eye morphology	corneal deposits	both	1.0 %	1.00
eye morphology	corneal mineralization	females	2.0 %	1.0
eye morphology	corneal mineralization	males	1.0 %	1.0
eye morphology	corneal mineralization	both	1.0 %	1.00
eye morphology	corneal scleralization	females	3.0 %	1.00
eye morphology	corneal scleralization	males	1.0 %	1.0
eye morphology	corneal scleralization	both	2.0 %	1.00
eye morphology	corneal ulcer	females	1.0 %	1.0
eye morphology	corneal ulcer	males	1.0 %	1.0
eye morphology	corneal ulcer	both	1.0 %	1.00
eye morphology	eye closure	females	1.0 %	1.00
eye morphology	eye closure	males	0.0 %	1.0
eye morphology	eye closure	both	1.0 %	1.0
eye morphology	eye hemorrhage or blood presence	females	2.0 %	1.00
eye morphology	eye hemorrhage or blood presence	males	1.0 %	1.0
eye morphology	eye hemorrhage or blood presence	both	1.0 %	1.00
eye morphology	eyelid morphology	females	1.0 %	1.0
eye morphology	eyelid morphology	males	0.0 %	1.0
eye morphology	eyelid morphology	both	1.0 %	1.0
eye morphology	eyes (present, absent)	females	1.0 %	1.0
eye morphology	eyes (present, absent)	males	0.0 %	1.0
eye morphology	eyes (present, absent)	both	0.0 %	1.0
eye morphology	fusion between cornea and lens	females	4.0 %	1.00
eye morphology	fusion between cornea and lens	males	2.0 %	1.0
eye morphology	fusion between cornea and lens	both	3.0 %	1.00
eye morphology	iris pigmentation	females	2.0 %	1.0
eye morphology	iris pigmentation	males	1.0 %	1.0
eye morphology	iris pigmentation	both	2.0 %	1.00
eye morphology	iris transillumination	females	2.0 %	1.00
eye morphology	iris transillumination	males	1.0 %	1.0
eye morphology	iris transillumination	both	1.0 %	1.00
eye morphology	irispupil	females	4.0 %	1.00
eye morphology	irispupil	males	3.0 %	1.0
eye morphology	irispupil	both	3.0 %	1.00
eye morphology	lacrimation	females	3.0 %	1.0
eye morphology	lacrimation	males	2.0 %	1.0
eye morphology	lacrimation	both	3.0 %	1.0
eye morphology	lens	females	10.0 %	1.00
eye morphology	lens	males	8.0 %	1.0
eye morphology	lens	both	9.0 %	1.0
eye morphology	lens opacity	females	78.0 %	1.06e-7
eye morphology	lens opacity	males	23.0 %	0.0665
eye morphology	lens opacity	both	49.0 %	2.24e-7
eye morphology	narrow eye opening	females	2.0 %	1.0
eye morphology	narrow eye opening	males	1.0 %	1.0
eye morphology	narrow eye opening	both	1.0 %	1.0
eye morphology	optic disc	females	25.0 %	0.00349
eye morphology	optic disc	males	2.0 %	1.0
eye morphology	optic disc	both	12.0 %	0.00785
eye morphology	persistence of hyaloid vascular system	females	14.0 %	1.0
eye morphology	persistence of hyaloid vascular system	males	11.0 %	0.333
eye morphology	persistence of hyaloid vascular system	both	3.0 %	0.790
eye morphology	pupil dilation	females	2.0 %	1.0
eye morphology	pupil dilation	males	1.0 %	1.0
eye morphology	pupil dilation	both	2.0 %	1.0
eye morphology	pupil light response	females	2.0 %	1.00
eye morphology	pupil light response	males	25.0 %	0.000720
eye morphology	pupil light response	both	12.0 %	0.00425
eye morphology	pupil position	females	4.0 %	1.00
eye morphology	pupil position	males	3.0 %	1.0
eye morphology	pupil position	both	4.0 %	1.00
eye morphology	pupil shape	females	3.0 %	1.00
eye morphology	pupil shape	males	2.0 %	1.0
eye morphology	pupil shape	both	3.0 %	1.00
eye morphology	retina	females	40.0 %	0.00445
eye morphology	retina	males	34.0 %	0.0351
eye morphology	retina	both	37.0 %	0.000952
eye morphology	retinal blood vessels	females	4.0 %	1.0
eye morphology	retinal blood vessels	males	2.0 %	1.0
eye morphology	retinal blood vessels	both	3.0 %	1.0
eye morphology	retinal blood vessels pattern	females	5.0 %	1.0
eye morphology	retinal blood vessels pattern	males	2.0 %	1.0
eye morphology	retinal blood vessels pattern	both	4.0 %	1.00
eye morphology	retinal blood vessels structure	females	4.0 %	1.00
eye morphology	retinal blood vessels structure	males	2.0 %	1.0
eye morphology	retinal blood vessels structure	both	3.0 %	1.00
eye morphology	retinal pigmentation	females	12.0 %	1.0
eye morphology	retinal pigmentation	males	36.0 %	0.00839
eye morphology	retinal pigmentation	both	16.0 %	0.0927
eye morphology	retinal structure	females	4.0 %	1.00
eye morphology	retinal structure	males	2.0 %	1.0
eye morphology	retinal structure	both	3.0 %	1.00
eye morphology	synechia	females	4.0 %	1.0
eye morphology	synechia	males	2.0 %	1.0
eye morphology	synechia	both	3.0 %	1.00
eye morphology	vitreous	females	4.0 %	1.00
eye morphology	vitreous	males	2.0 %	1.0
eye morphology	vitreous	both	3.0 %	1.00
SHIRPA	activity body position	females	1.0 %	1.0
SHIRPA	activity body position	males	2.0 %	1.0
SHIRPA	activity body position	both	1.0 %	1.00
SHIRPA	aggression	females	0.0 %	1.00
SHIRPA	aggression	males	1.0 %	1.0
SHIRPA	aggression	both	1.0 %	1.0
SHIRPA	body length	females	0.0 %	1.0
SHIRPA	body length	males	0.0 %	1.00
SHIRPA	body length	both	0.0 %	1.00
SHIRPA	body position	females	0.0 %	1.0
SHIRPA	body position	males	1.0 %	1.0
SHIRPA	body position	both	0.0 %	1.0
SHIRPA	body thickness	females	1.0 %	1.0
SHIRPA	body thickness	males	0.0 %	1.0
SHIRPA	body thickness	both	0.0 %	1.0
SHIRPA	coat color abdomen	females	3.0 %	1.00
SHIRPA	coat color abdomen	males	4.0 %	1.0
SHIRPA	coat color abdomen	both	4.0 %	1.0
SHIRPA	coat color back	females	0.0 %	1.0
SHIRPA	coat color back	males	0.0 %	1.00
SHIRPA	coat color back	both	0.0 %	1.00
SHIRPA	coat color head	females	0.0 %	1.0
SHIRPA	coat color head	males	0.0 %	1.00
SHIRPA	coat color head	both	0.0 %	1.0
SHIRPA	coat color pattern abdomen	females	1.0 %	1.0
SHIRPA	coat color pattern abdomen	males	1.0 %	1.0
SHIRPA	coat color pattern abdomen	both	1.0 %	1.0
SHIRPA	coat color pattern back	females	0.0 %	1.0
SHIRPA	coat color pattern back	males	0.0 %	1.00
SHIRPA	coat color pattern back	both	0.0 %	1.0
SHIRPA	coat color pattern head	females	0.0 %	1.0
SHIRPA	coat color pattern head	males	0.0 %	1.0
SHIRPA	coat color pattern head	both	0.0 %	1.00
SHIRPA	coat hair abdomen texture appearance	females	2.0 %	1.0
SHIRPA	coat hair abdomen texture appearance	males	2.0 %	1.0
SHIRPA	coat hair abdomen texture appearance	both	2.0 %	1.0
SHIRPA	coat hair back texture appearance	females	0.0 %	1.0
SHIRPA	coat hair back texture appearance	males	0.0 %	1.0
SHIRPA	coat hair back texture appearance	both	0.0 %	1.0
SHIRPA	coat hair distribution abdomen	females	0.0 %	1.0
SHIRPA	coat hair distribution abdomen	males	1.0 %	1.00
SHIRPA	coat hair distribution abdomen	both	1.0 %	1.00
SHIRPA	coat hair distribution back	females	0.0 %	1.0
SHIRPA	coat hair distribution back	males	0.0 %	1.0
SHIRPA	coat hair distribution back	both	0.0 %	1.0
SHIRPA	coat hair distribution head	females	1.0 %	1.00
SHIRPA	coat hair distribution head	males	1.0 %	1.0
SHIRPA	coat hair distribution head	both	1.0 %	1.0
SHIRPA	coat hair head texture appearance	females	0.0 %	1.00
SHIRPA	coat hair head texture appearance	males	0.0 %	1.0
SHIRPA	coat hair head texture appearance	both	0.0 %	1.0
SHIRPA	contact righting	females	5.0 %	1.0
SHIRPA	contact righting	males	5.0 %	1.00
SHIRPA	contact righting	both	5.0 %	1.00
SHIRPA	ear morphology	females	0.0 %	1.0
SHIRPA	ear morphology	males	0.0 %	1.0
SHIRPA	ear morphology	both	0.0 %	1.0
SHIRPA	fat distribution	females	0.0 %	1.0
SHIRPA	fat distribution	males	0.0 %	1.0
SHIRPA	fat distribution	both	0.0 %	1.00
SHIRPA	forelimb digit number	females	0.0 %	1.00
SHIRPA	forelimb digit number	males	0.0 %	1.0
SHIRPA	forelimb digit number	both	0.0 %	1.00
SHIRPA	forelimb digit position	females	0.0 %	1.0
SHIRPA	forelimb digit position	males	0.0 %	1.0
SHIRPA	forelimb digit position	both	0.0 %	1.0
SHIRPA	forelimb digit shape	females	0.0 %	1.0
SHIRPA	forelimb digit shape	males	0.0 %	1.0
SHIRPA	forelimb digit shape	both	0.0 %	1.0
SHIRPA	forelimb digit size	females	0.0 %	1.0
SHIRPA	forelimb digit size	males	0.0 %	1.0
SHIRPA	forelimb digit size	both	0.0 %	1.0
SHIRPA	forelimb footpads	females	0.0 %	1.0
SHIRPA	forelimb footpads	males	0.0 %	1.0
SHIRPA	forelimb footpads	both	0.0 %	1.0
SHIRPA	forelimb nail length	females	0.0 %	1.0
SHIRPA	forelimb nail length	males	0.0 %	1.0
SHIRPA	forelimb nail length	both	0.0 %	1.0
SHIRPA	forelimb nail number	females	0.0 %	1.0
SHIRPA	forelimb nail number	males	0.0 %	1.0
SHIRPA	forelimb nail number	both	0.0 %	1.0
SHIRPA	forelimb nail position	females	0.0 %	1.0
SHIRPA	forelimb nail position	males	0.0 %	1.0
SHIRPA	forelimb nail position	both	0.0 %	1.0
SHIRPA	forelimb nail shape	females	0.0 %	1.0
SHIRPA	forelimb nail shape	males	0.0 %	1.0
SHIRPA	forelimb nail shape	both	0.0 %	1.0
SHIRPA	forelimbs position	females	0.0 %	1.0
SHIRPA	forelimbs position	males	0.0 %	1.0
SHIRPA	forelimbs position	both	0.0 %	1.0
SHIRPA	forelimbs shape	females	0.0 %	1.0
SHIRPA	forelimbs shape	males	0.0 %	1.0
SHIRPA	forelimbs shape	both	0.0 %	1.0
SHIRPA	forelimbs size	females	0.0 %	1.0
SHIRPA	forelimbs size	males	0.0 %	1.0
SHIRPA	forelimbs size	both	0.0 %	1.0
SHIRPA	forepaw position	females	0.0 %	1.0
SHIRPA	forepaw position	males	0.0 %	1.0
SHIRPA	forepaw position	both	0.0 %	1.0
SHIRPA	forepaw shape	females	0.0 %	1.0
SHIRPA	forepaw shape	males	0.0 %	1.0
SHIRPA	forepaw shape	both	0.0 %	1.0
SHIRPA	forepaw size	females	0.0 %	1.0
SHIRPA	forepaw size	males	0.0 %	1.0
SHIRPA	forepaw size	both	0.0 %	1.0
SHIRPA	gait (fluidity)	females	0.0 %	1.0
SHIRPA	gait (fluidity)	males	0.0 %	1.00
SHIRPA	gait (fluidity)	both	0.0 %	1.00
SHIRPA	genitalia morphology	females	0.0 %	1.00
SHIRPA	genitalia morphology	males	0.0 %	1.0
SHIRPA	genitalia morphology	both	0.0 %	1.00
SHIRPA	genitalia presence	females	0.0 %	1.0
SHIRPA	genitalia presence	males	0.0 %	1.0
SHIRPA	genitalia presence	both	0.0 %	1.0
SHIRPA	genitalia size	females	0.0 %	1.0
SHIRPA	genitalia size	males	0.0 %	1.0
SHIRPA	genitalia size	both	0.0 %	1.0
SHIRPA	head bobbing	females	0.0 %	1.0
SHIRPA	head bobbing	males	0.0 %	1.0
SHIRPA	head bobbing	both	0.0 %	1.0
SHIRPA	head morphology	females	0.0 %	1.0
SHIRPA	head morphology	males	0.0 %	1.00
SHIRPA	head morphology	both	0.0 %	1.0
SHIRPA	head size	females	0.0 %	1.0
SHIRPA	head size	males	0.0 %	1.0
SHIRPA	head size	both	0.0 %	1.00
SHIRPA	hindlimb digit number	females	1.0 %	1.00
SHIRPA	hindlimb digit number	males	0.0 %	1.0
SHIRPA	hindlimb digit number	both	0.0 %	1.00
SHIRPA	hindlimb digit position	females	0.0 %	1.0
SHIRPA	hindlimb digit position	males	0.0 %	1.0
SHIRPA	hindlimb digit position	both	0.0 %	1.0
SHIRPA	hindlimb digit shape	females	0.0 %	1.0
SHIRPA	hindlimb digit shape	males	0.0 %	1.0
SHIRPA	hindlimb digit shape	both	0.0 %	1.0
SHIRPA	hindlimb digit size	females	0.0 %	1.00
SHIRPA	hindlimb digit size	males	0.0 %	1.0
SHIRPA	hindlimb digit size	both	0.0 %	1.00
SHIRPA	hindlimb nail length	females	0.0 %	1.0
SHIRPA	hindlimb nail length	males	0.0 %	1.0
SHIRPA	hindlimb nail length	both	0.0 %	1.00
SHIRPA	hindlimb nail number	females	0.0 %	1.0
SHIRPA	hindlimb nail number	males	1.0 %	1.0
SHIRPA	hindlimb nail number	both	0.0 %	1.00
SHIRPA	hindlimb nail position	females	0.0 %	1.0
SHIRPA	hindlimb nail position	males	0.0 %	1.0
SHIRPA	hindlimb nail position	both	0.0 %	1.0
SHIRPA	hindlimb nail shape	females	0.0 %	1.0
SHIRPA	hindlimb nail shape	males	0.0 %	1.0
SHIRPA	hindlimb nail shape	both	0.0 %	1.0
SHIRPA	hindlimbs footpads	females	0.0 %	1.0
SHIRPA	hindlimbs footpads	males	0.0 %	1.0
SHIRPA	hindlimbs footpads	both	0.0 %	1.0
SHIRPA	hindlimbs position	females	0.0 %	1.0
SHIRPA	hindlimbs position	males	0.0 %	1.0
SHIRPA	hindlimbs position	both	0.0 %	1.0
SHIRPA	hindlimbs shape	females	0.0 %	1.0
SHIRPA	hindlimbs shape	males	0.0 %	1.0
SHIRPA	hindlimbs shape	both	0.0 %	1.0
SHIRPA	hindlimbs size	females	0.0 %	1.0
SHIRPA	hindlimbs size	males	0.0 %	1.0
SHIRPA	hindlimbs size	both	0.0 %	1.0
SHIRPA	hindpaw position	females	0.0 %	1.0
SHIRPA	hindpaw position	males	0.0 %	1.0
SHIRPA	hindpaw position	both	0.0 %	1.0
SHIRPA	hindpaw shape	females	0.0 %	1.0
SHIRPA	hindpaw shape	males	0.0 %	1.0
SHIRPA	hindpaw shape	both	0.0 %	1.0
SHIRPA	hindpaw size	females	0.0 %	1.0
SHIRPA	hindpaw size	males	0.0 %	1.0
SHIRPA	hindpaw size	both	0.0 %	1.0
SHIRPA	limb grasp	females	9.0 %	1.00
SHIRPA	limb grasp	males	19.0 %	0.0730
SHIRPA	limb grasp	both	5.0 %	0.327
SHIRPA	lower lip morphology	females	0.0 %	1.0
SHIRPA	lower lip morphology	males	0.0 %	1.0
SHIRPA	lower lip morphology	both	0.0 %	1.0
SHIRPA	lower teeth appearance	females	0.0 %	1.0
SHIRPA	lower teeth appearance	males	0.0 %	1.00
SHIRPA	lower teeth appearance	both	0.0 %	1.00
SHIRPA	mouth morphology	females	0.0 %	1.0
SHIRPA	mouth morphology	males	0.0 %	1.00
SHIRPA	mouth morphology	both	0.0 %	1.00
SHIRPA	salivation	females	0.0 %	1.0
SHIRPA	salivation	males	0.0 %	1.0
SHIRPA	salivation	both	0.0 %	1.0
SHIRPA	skin color back paws	females	0.0 %	1.0
SHIRPA	skin color back paws	males	0.0 %	1.0
SHIRPA	skin color back paws	both	0.0 %	1.0
SHIRPA	skin color ear	females	0.0 %	1.0
SHIRPA	skin color ear	males	0.0 %	1.0
SHIRPA	skin color ear	both	0.0 %	1.0
SHIRPA	skin color front paws	females	0.0 %	1.0
SHIRPA	skin color front paws	males	0.0 %	1.0
SHIRPA	skin color front paws	both	0.0 %	1.0
SHIRPA	skin color snout	females	0.0 %	1.0
SHIRPA	skin color snout	males	0.0 %	1.0
SHIRPA	skin color snout	both	0.0 %	1.0
SHIRPA	skin color tail	females	0.0 %	1.0
SHIRPA	skin color tail	males	0.0 %	1.0
SHIRPA	skin color tail	both	0.0 %	1.0
SHIRPA	skin color whole body	females	0.0 %	1.0
SHIRPA	skin color whole body	males	0.0 %	1.0
SHIRPA	skin color whole body	both	0.0 %	1.0
SHIRPA	skin texture back paw	females	0.0 %	1.0
SHIRPA	skin texture back paw	males	0.0 %	1.0
SHIRPA	skin texture back paw	both	0.0 %	1.0
SHIRPA	skin texture ear	females	0.0 %	1.0
SHIRPA	skin texture ear	males	0.0 %	1.0
SHIRPA	skin texture ear	both	0.0 %	1.0
SHIRPA	skin texture front paws	females	0.0 %	1.0
SHIRPA	skin texture front paws	males	0.0 %	1.0
SHIRPA	skin texture front paws	both	0.0 %	1.0
SHIRPA	skin texture snout	females	0.0 %	1.0
SHIRPA	skin texture snout	males	0.0 %	1.0
SHIRPA	skin texture snout	both	0.0 %	1.0
SHIRPA	skin texture tail	females	0.0 %	1.0
SHIRPA	skin texture tail	males	0.0 %	1.0
SHIRPA	skin texture tail	both	0.0 %	1.0
SHIRPA	skin texture whole body	females	0.0 %	1.0
SHIRPA	skin texture whole body	males	0.0 %	1.00
SHIRPA	skin texture whole body	both	0.0 %	1.00
SHIRPA	snout size	females	0.0 %	1.0
SHIRPA	snout size	males	1.0 %	1.0
SHIRPA	snout size	both	0.0 %	1.0
SHIRPA	startle response	females	0.0 %	1.00
SHIRPA	startle response	males	0.0 %	1.00
SHIRPA	startle response	both	0.0 %	1.00
SHIRPA	tail curvature	females	0.0 %	1.00
SHIRPA	tail curvature	males	0.0 %	1.0
SHIRPA	tail curvature	both	0.0 %	1.0
SHIRPA	tail elevation	females	1.0 %	1.00
SHIRPA	tail elevation	males	2.0 %	1.0
SHIRPA	tail elevation	both	1.0 %	1.0
SHIRPA	tail length	females	0.0 %	1.0
SHIRPA	tail length	males	0.0 %	1.0
SHIRPA	tail length	both	0.0 %	1.00
SHIRPA	tail morphology	females	0.0 %	1.00
SHIRPA	tail morphology	males	0.0 %	1.0
SHIRPA	tail morphology	both	0.0 %	1.00
SHIRPA	tail presence	females	0.0 %	1.0
SHIRPA	tail presence	males	0.0 %	1.0
SHIRPA	tail presence	both	0.0 %	1.0
SHIRPA	tail shape	females	0.0 %	1.0
SHIRPA	tail shape	males	0.0 %	1.0
SHIRPA	tail shape	both	0.0 %	1.00
SHIRPA	tail thickness	females	0.0 %	1.0
SHIRPA	tail thickness	males	0.0 %	1.0
SHIRPA	tail thickness	both	0.0 %	1.0
SHIRPA	teeth presence	females	0.0 %	1.0
SHIRPA	teeth presence	males	0.0 %	1.00
SHIRPA	teeth presence	both	0.0 %	1.00
SHIRPA	transfer arousal	females	1.0 %	1.0
SHIRPA	transfer arousal	males	12.0 %	0.0653
SHIRPA	transfer arousal	both	6.0 %	0.109
SHIRPA	tremor	females	0.0 %	1.0
SHIRPA	tremor	males	0.0 %	1.0
SHIRPA	tremor	both	0.0 %	1.00
SHIRPA	trunk curl	females	0.0 %	1.00
SHIRPA	trunk curl	males	0.0 %	1.0
SHIRPA	trunk curl	both	0.0 %	1.0
SHIRPA	unexpected behaviors (circling, head bobbing, jumping, retropulsion)	females	0.0 %	1.0
SHIRPA	unexpected behaviors (circling, head bobbing, jumping, retropulsion)	males	0.0 %	1.0
SHIRPA	unexpected behaviors (circling, head bobbing, jumping, retropulsion)	both	0.0 %	1.00
SHIRPA	upper lip morphology	females	0.0 %	1.0
SHIRPA	upper lip morphology	males	0.0 %	1.0
SHIRPA	upper lip morphology	both	0.0 %	1.0
SHIRPA	upper teeth appearance	females	0.0 %	1.0
SHIRPA	upper teeth appearance	males	0.0 %	1.0
SHIRPA	upper teeth appearance	both	0.0 %	1.00
SHIRPA	vibrissae appearance	females	2.0 %	1.0
SHIRPA	vibrissae appearance	males	1.0 %	1.0
SHIRPA	vibrissae appearance	both	1.0 %	1.0
SHIRPA	vibrissae presence	females	2.0 %	1.00
SHIRPA	vibrissae presence	males	1.0 %	1.0
SHIRPA	vibrissae presence	both	2.0 %	1.0
SHIRPA	vocalization	females	2.0 %	1.00
SHIRPA	vocalization	males	2.0 %	1.0
SHIRPA	vocalization	both	2.0 %	1.00

GENOTYPE CORRELATION PLOT

Correlate Rev3l^{tm1b(EUCOMM)Hmgu} -/+ with genotype: