JaxKOMP-EAP effect sizes:   Ipptm1.1(KOMP)Vlcg -/+                         Gene Ipp

  MULTIPLE (NUMERIC) TRAIT PROFILE PLOT — Early Adult Phenotyping study (EAP)
      In this plot, data points are the computed genotype effect size vs. C57BL/6NJ controls, for all measured numeric phenotypes in   JaxKOMP-EAP
Dimensions  ×  px
Plot Options    
Significance Threshold    1e-81e-71e-61e-51e-41e-30.010.11      
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   body compositionclinical blood chemistryECTEKGglucose tolerance testgrip strengthheart weighthematologyholeboardinsulin blood levellight / darkopen fieldrotarodurinalysisurinalysisrotarodopen fieldlight / darkinsulin blood levelholeboardhematologyheart weightgripstrengthglucose tolerance testEKGECTclinicalbloodchemistrybodycompositionProcedure-2.5-2.0-1.5-1.0-0.50.00.51.01.52.02.5Ipptm1.1(KOMP)Vlcg -/+ Trait Effect RankZ
  
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Procedure
JaxKOMP-EAP Trait
Trait Effect
Trait Effect SE
Trait Effect RankZ
Adjusted p-value
Unadjusted p-value
body compositionbody length0.0855240.113831.28310.7350.461
body compositionbody weight (at time of DXA)0.628500.692890.601310.5920.375
body compositionbone area, whole body scan, head excluded0.274730.156981.37590.3130.0954
body compositionbone mineral content of whole body scan, head excluded0.00823470.00944950.610710.6690.394
body compositionbone mineral content to body weight ratio0.000307160.000539070.584590.7780.575
body compositionbone mineral density of whole body scan, head excluded-0.000506650.00052886-0.518920.6480.349
body compositionfat tissue mass of whole body scan, head excluded-0.332550.20038-0.623920.3220.113
body compositionfat tissue mass to body weight ratio-0.0131700.0079176-0.576510.3010.111
body compositionlean tissue mass of whole body scan, head excluded-0.262820.27310-0.714460.6430.347
body compositionlean tissue mass to body weight ratio-0.0133180.0092937-0.779020.4130.167


  MULTIPLE (CATEGORICAL) TRAIT PROFILE PLOT — Early Adult Phenotyping study (EAP)
      In this plot, data points are the computed genotype effect % vs. C57BL/6NJ controls, for all measured categorical phenotypes in   JaxKOMP-EAP
Dimensions  ×  px
Plot Options
Include Sexes Data
Significance Threshold    1e-81e-71e-61e-51e-41e-30.010.11  
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   eye morphologyrotarodSHIRPASHIRPArotarodeyemorphologyProcedure0102030405060708090100Ipptm1.1(KOMP)Vlcg -/+ Trait Effect %
  
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Procedure
JaxKOMP-EAP Trait
Sex
Trait Effect
P-value
eye morphologyanterior chamber depthfemales1.0 %1.0
eye morphologyanterior chamber depthmales0.0 %1.0
eye morphologyanterior chamber depthboth1.0 %1.0
eye morphologybulging eyefemales1.0 %1.00
eye morphologybulging eyemales0.0 %1.0
eye morphologybulging eyeboth1.0 %1.0
eye morphologycorneafemales4.0 %1.0
eye morphologycorneamales2.0 %1.0
eye morphologycorneaboth3.0 %1.00
eye morphologycornea opacityfemales5.0 %1.00


  GENOTYPE CORRELATION PLOT
Correlate Ipptm1.1(KOMP)Vlcg -/+ with genotype: