HMDPpheno9: Liver metabolite levels: Lipids (lysolipids) in males of 104 strains of the Hybrid Mouse Diversity Panel (HMDP) (2014)

Ghazalpour A, Bennett BJ, Shih D, Che N, Orozco L, Pan C, Hagopian R, He A, Kayne P, Yang WP, Kirchgessner T, Lusis AJ. Genetic regulation of mouse liver metabolite levels. Mol Syst Biol. 2014 May 23;10(5):730. doi: 10.15252/msb.20135004.   PubMed 24860088  


       
HMDPpheno9 downloads
• Download HMDPpheno9 project data set     one row per animal, one column per trait
• Download HMDPpheno9 strain means, SD, N, etc.     one row per strain/sex/measure
• HMDPpheno9 supplementary data
Participants Anatole Ghazalpour       University of California, Los Angeles Los Angeles, CA
Brian J Bennett       University of North Carolina Chapel Hill, NC
Luz Orozco       University of California, Los Angeles Los Angeles, CA
Aldons J Lusis       University of California, Los Angeles Los Angeles, CA
With: Shih D, Che N, Pan C, Hagopian R, He A, Kayne P, Yang W-P
ContactAnatole Ghazalpour     aghazalp@ucla.edu     Lab web site
AffiliationHybrid Mouse Diversity Panel Group (HMDP)
Part of a series: • Metabolite survey: Amino acids   see HMDPpheno6
• Metabolite survey: Carbs, cofactors, vitamins, energy, xenobiotics   see HMDPpheno7
• Metabolite survey: Lipids (non-lysolipids)   see HMDPpheno8
• Metabolite survey: Lipids (lysolipids)   (this project) HMDPpheno9
• Metabolite survey: Nucleotides, peptides   see HMDPpheno10
Project type Phenotype strain survey data set
MPD identifiersHMDPpheno9     MPD:504
Data changelog No updates/corrections.       Initial release date: 06/2014.
Formatted citation
Click above to copy-paste the entire citation for this MPD web page.
Summary of procedures that were conducted
• metabolite quantification Liver metabolic profiling. Molecular measures of lipids (lysolipids). 16h fast.
Mice: HMDP   106 strains   ♂   age 16wks   1 cohort

Select table page: First Prev Next Last
Data set MPD ID Procedure / Protocol Drug or Challenge Phenotype Measure Panel No. of Strains Sex Age Sample Size (Avg)
    HMDPpheno9 50401 metabolite quantification (none) 2-arachidonoylglycerophosphocholine (16h fast), relative abundance  AGPC HMDP 106 m 16wks N=1
    HMDPpheno9 50402 metabolite quantification (none) 2-docosahexaenoylglycerophosphocholine (16h fast), relative abundance  DHGPC HMDP 105 m 16wks N=1
    HMDPpheno9 50403 metabolite quantification (none) 2-docosahexaenoylglycerophosphoethanolamine (16h fast), relative abundance  DHGPEA HMDP 106 m 16wks N=1
    HMDPpheno9 50404 metabolite quantification (none) 2-docosapentaenoylglycerophosphocholine (16h fast), relative abundance  DPGPC HMDP 94 m 16wks N=1
    HMDPpheno9 50405 metabolite quantification (none) 2-docosapentaenoylglycerophosphoethanolamine (16h fast), relative abundance  DPGPEA HMDP 100 m 16wks N=1
    HMDPpheno9 50406 metabolite quantification (none) 1-eicosatrienoylglycerophosphocholine (16h fast), relative abundance  EGPC_1 HMDP 91 m 16wks N=1
    HMDPpheno9 50407 metabolite quantification (none) 2-eicosatrienoylglycerophosphocholine (16h fast), relative abundance  EGPC_2 HMDP 102 m 16wks N=1
    HMDPpheno9 50408 metabolite quantification (none) 1-heptadecanoylglycerophosphocholine (16h fast), relative abundance  HGPC HMDP 99 m 16wks N=1
    HMDPpheno9 50409 metabolite quantification (none) 1-linoleoylglycerophosphocholine (16h fast), relative abundance  LGPC_1 HMDP 106 m 16wks N=1
    HMDPpheno9 50410 metabolite quantification (none) 2-linoleoylglycerophosphocholine (16h fast), relative abundance  LGPC_2 HMDP 106 m 16wks N=1
    HMDPpheno9 50411 metabolite quantification (none) 2-linoleoylglycerophosphoethanolamine (16h fast), relative abundance  LGPEA_2 HMDP 106 m 16wks N=1
    HMDPpheno9 50412 metabolite quantification (none) 1-myristoylglycerophosphocholine (16h fast), relative abundance  MGPC HMDP 91 m 16wks N=1
    HMDPpheno9 50413 metabolite quantification (none) 1-oleoylglycerophosphocholine (16h fast), relative abundance  OGPC_1 HMDP 106 m 16wks N=1
    HMDPpheno9 50414 metabolite quantification (none) 2-oleoylglycerophosphocholine (16h fast), relative abundance  OGPC_2 HMDP 106 m 16wks N=1
    HMDPpheno9 50415 metabolite quantification (none) 1-pentadecanoylglycerophosphocholine (16h fast), relative abundance  PDGPC HMDP 93 m 16wks N=1
    HMDPpheno9 50416 metabolite quantification (none) 1-palmitoylglycerophosphocholine (16h fast), relative abundance  PGPC_1 HMDP 106 m 16wks N=1
    HMDPpheno9 50417 metabolite quantification (none) 2-palmitoylglycerophosphocholine (16h fast), relative abundance  PGPC_2 HMDP 106 m 16wks N=1
    HMDPpheno9 50418 metabolite quantification (none) 1-palmitoleoylglycerophosphocholine (16h fast), relative abundance  POGPC HMDP 105 m 16wks N=1
    HMDPpheno9 50419 metabolite quantification (none) 1-stearoylglycerophosphocholine (16h fast), relative abundance  SGPC_1 HMDP 106 m 16wks N=1
    HMDPpheno9 50420 metabolite quantification (none) 2-stearoylglycerophosphocholine (16h fast), relative abundance  SGPC_2 HMDP 91 m 16wks N=1
    HMDPpheno9 50421 metabolite quantification (none) 1-stearoylglycerophosphoethanolamine (16h fast), relative abundance  SGPE HMDP 106 m 16wks N=1
    HMDPpheno9 50422 metabolite quantification (none) 2-arachidonoylglycerophosphoethanolamine (16h fast), relative abundance  AGPA HMDP 106 m 16wks N=1
    HMDPpheno9 50423 metabolite quantification (none) 1-arachidonoylglycerophosphoethanolamine (16h fast), relative abundance  AGPEA HMDP 106 m 16wks N=1
    HMDPpheno9 50424 metabolite quantification (none) 1-arachidonoylglycerophosphoinositol (16h fast), relative abundance  AGPI HMDP 104 m 16wks N=1
    HMDPpheno9 50425 metabolite quantification (none) 1-linoleoylglycerophosphoethanolamine (16h fast), relative abundance  LGPEA_1 HMDP 106 m 16wks N=1
    HMDPpheno9 50426 metabolite quantification (none) 1-oleoylglycerophosphoethanolamine (16h fast), relative abundance  OGPEA_1 HMDP 106 m 16wks N=1
    HMDPpheno9 50427 metabolite quantification (none) 2-oleoylglycerophosphoethanolamine (16h fast), relative abundance  OGPEA_2 HMDP 103 m 16wks N=1
    HMDPpheno9 50428 metabolite quantification (none) 1-oleoylglycerophosphoinositol (16h fast), relative abundance  OGPI HMDP 100 m 16wks N=1
    HMDPpheno9 50429 metabolite quantification (none) 2-palmitoylglycerophosphoethanolamine (16h fast), relative abundance  PGEA HMDP 93 m 16wks N=1
    HMDPpheno9 50430 metabolite quantification (none) 1-palmitoylglycerophosphoethanolamine (16h fast), relative abundance  PGPEA HMDP 106 m 16wks N=1
    HMDPpheno9 50431 metabolite quantification (none) 1-palmitoylglycerophosphoinositol (16h fast), relative abundance  PGPI HMDP 106 m 16wks N=1
    HMDPpheno9 50432 metabolite quantification (none) 1-stearoylglycerophosphoinositol (16h fast), relative abundance  SGPI HMDP 106 m 16wks N=1
    All boxes             To see more rows use the paging control at top.