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Data set
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Paigen1
(29)
Procedure / Protocol
Clear All
body weight
(1)
colony observation
(1)
histopathology
(15)
lipid profile
(8)
metabolic panel
(2)
organ dimensions
(1)
organ weights
(1)
Treatment
Clear All
(none)
(1)
high-fat diet
(28)
Panel
Clear All
inbred
(29)
Sex
Clear All
both
(29)
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Data set
Procedure / Protocol
Treatment
Phenotype Measure / Variable (click to view)
Panel
No. of Strains
Sex
Age
Sample Size (Avg)
Year
Paigen1:4
Paigen1
colony observation
(none)
age at start of diet (local parameter) [d]
age
2904
inbred
41
both
N=10
2000
Paigen1:5
Paigen1
body weight
high-fat diet
body weight [g]
bw
2905
start after 8wks on diet fold change
inbred
43
both
7-11wks
N=12
2000
Paigen1:7
Paigen1
organ weights
high-fat diet
liver weight at sacrifice [g]
liverweight
2907
inbred
43
both
15-19wks
N=9
2000
Paigen1:8
Paigen1
organ dimensions
high-fat diet
gallbladder volume [µL]
gbvol
2908
inbred
43
both
15-19wks
N=8
2000
Paigen1:9
Paigen1
histopathology
high-fat diet
gallbladder, mucin (score: 0-4) [score]
mucin
2909
inbred
43
both
15-19wks
N=8
2000
Paigen1:10
Paigen1
histopathology
high-fat diet
gallbladder, arc (score: 0-4) [score]
arc
2910
inbred
43
both
15-19wks
N=8
2000
Paigen1:11
Paigen1
histopathology
high-fat diet
gallbladder, filaments (score: 0-4) [score]
filaments
2911
inbred
43
both
15-19wks
N=8
2000
Paigen1:12
Paigen1
histopathology
high-fat diet
gallbladder, small liquid crystals (score: 0-4) [score]
smallLC
2912
inbred
43
both
15-19wks
N=8
2000
Paigen1:13
Paigen1
histopathology
high-fat diet
gallbladder, aggregated liquid crystals (score: 0-4) [score]
agLC
2913
inbred
43
both
15-19wks
N=8
2000
Paigen1:14
Paigen1
histopathology
high-fat diet
gallbladder, fused liquid crystals (score: 0-4) [score]
fusedLC
2914
inbred
43
both
15-19wks
N=8
2000
Paigen1:15
Paigen1
histopathology
high-fat diet
gallbladder, cholesterol monohydrate crystals (score: 0-4) [score]
ChMC
2915
inbred
43
both
15-19wks
N=8
2000
Paigen1:16
Paigen1
histopathology
high-fat diet
gallbladder, number of sandy stones [n]
sandysto
2916
inbred
43
both
15-19wks
N=8
2000
Paigen1:17
Paigen1
histopathology
high-fat diet
gallbladder, number of true gallstones [n]
gs
2917
inbred
43
both
15-19wks
N=8
2000
Paigen1:18
Paigen1
histopathology
high-fat diet
gallbladder, number of sandy plus true stones [n]
nstones
2918
inbred
43
both
15-19wks
N=8
2000
Paigen1:19
Paigen1
histopathology
high-fat diet
gallbladder, presence of stones (score: 1=present, 0=absent) [score]
st_pres
2919
inbred
43
both
15-19wks
N=9
2000
Paigen1:20
Paigen1
lipid profile
high-fat diet
total cholesterol (plasma) [mg/dL]
totalCh
2920
inbred
43
both
15-19wks
N=9
2000
Paigen1:21
Paigen1
lipid profile
high-fat diet
HDL cholesterol (plasma) [mg/dL]
HDL_Ch
2921
inbred
43
both
15-19wks
N=9
2000
Paigen1:22
Paigen1
lipid profile
high-fat diet
plasma cholesterol not in the HDL fraction [mg/dL]
nonHDL_Ch
2922
inbred
43
both
15-19wks
N=8
2000
Paigen1:23
Paigen1
lipid profile
high-fat diet
percentage of total plasma cholesterol in HDL fraction [%]
pctHDL_TCH
2923
inbred
43
both
15-19wks
N=8
2000
Paigen1:24
Paigen1
metabolic panel
high-fat diet
alanine transaminase (plasma ALT) [IU/L]
ALT
2924
inbred
43
both
15-19wks
N=8
2000
Paigen1:25
Paigen1
metabolic panel
high-fat diet
bile salts (plasma) [µmol/L]
bilesalts
2925
inbred
43
both
15-19wks
N=8
2000
Paigen1:26
Paigen1
lipid profile
high-fat diet
hepatic cholesterol concentration (free per g liver) [mg]
freeHCC
2926
inbred
43
both
15-19wks
N=6
2000
Paigen1:27
Paigen1
lipid profile
high-fat diet
hepatic cholesterol concentration (esterified per g liver) [mg]
estHCC
2927
inbred
43
both
15-19wks
N=6
2000
Paigen1:28
Paigen1
lipid profile
high-fat diet
hepatic cholesterol concentration (total per g liver) [mg]
totHCC
2928
inbred
43
both
15-19wks
N=8
2000
Paigen1:29
Paigen1
lipid profile
high-fat diet
hepatic cholesterol concentration (free to esterified ratio) [ratio]
free_to_est
2929
inbred
43
both
15-19wks
N=6
2000
Paigen1:30
Paigen1
histopathology
high-fat diet
liver microvacuoles (score: 0-4) [score]
microvacs
2930
inbred
43
both
15-19wks
N=3
2000
Paigen1:31
Paigen1
histopathology
high-fat diet
liver macrovacuoles (score: 0-4) [score]
macrovacs
2931
inbred
43
both
15-19wks
N=3
2000
Paigen1:32
Paigen1
histopathology
high-fat diet
liver inflammation (score: 0-4) [score]
inflammation
2932
inbred
43
both
15-19wks
N=3
2000
Paigen1:36
Paigen1
histopathology
high-fat diet
fatty streak aortic lesion size [µm
2
]
aortic_lesion
2936
inbred
44
both
15-19wks
N=8
2000
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