Project measure / variable:   Loos2   long_move_dist_DK

ID, description, units MPD:54044   long_move_dist_DK   cumulative long movement distance, over 3 days of testing, log10 transformed   [log(cm)]  during dark phase  
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
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  STRAIN COMPARISON PLOT
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Loos2 - cumulative long movement distance, over 3 days of testing, log10 transformed during dark phase



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means4.33   log(cm)
Median of the strain means4.40   log(cm)
SD of the strain means± 0.238
Coefficient of variation (CV)0.0551
Min–max range of strain means3.78   –   4.67   log(cm)
Mean sample size per strain35.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 21.0698 2.107 97.4131 < 0.0001
Residuals 426 9.2141 0.0216


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 4.11 0.215   59 0.028 0.0524 3.58, 4.58 -0.92
A/J m 4.45 0.117   43 0.0178 0.0263 4.16, 4.71 0.5
BALB/cByJ m 4.67 0.105   44 0.0159 0.0226 4.38, 4.91 1.43
C3H/HeJ m 3.78 0.107   29 0.0199 0.0284 3.58, 3.97 -2.31
C57BL/6J m 4.45 0.13   107 0.0126 0.0292 4.17, 4.71 0.5
CAST/EiJ m 4.36 0.179   14 0.0479 0.0411 4.13, 4.67 0.13
DBA/2J m 4.18 0.1   39 0.016 0.0239 3.87, 4.39 -0.63
FVB/NJ m 4.28 0.208   36 0.0347 0.0487 3.87, 5.03 -0.21
NOD/ShiLtJ m 4.48 0.138   37 0.0226 0.0307 4.17, 4.87 0.63
PWK/PhJ m 4.47 0.0968   15 0.025 0.0217 4.34, 4.68 0.59
WSB/EiJ m 4.4 0.132   14 0.0352 0.0299 4.21, 4.62 0.29


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 4.1062 0.0191 4.1438 4.0686
A/J m 4.451 0.0224 4.4951 4.4069
BALB/cByJ m 4.668 0.0222 4.7116 4.6245
C3H/HeJ m 3.7803 0.0273 3.834 3.7266
C57BL/6J m 4.4547 0.0142 4.4827 4.4268
CAST/EiJ m 4.3644 0.0393 4.4417 4.2872
DBA/2J m 4.1823 0.0235 4.2286 4.136
FVB/NJ m 4.2785 0.0245 4.3267 4.2303
NOD/ShiLtJ m 4.4755 0.0242 4.523 4.428
PWK/PhJ m 4.4689 0.038 4.5435 4.3942
WSB/EiJ m 4.3988 0.0393 4.476 4.3215




  GWAS USING LINEAR MIXED MODELS