Project measure / variable:   Nadeau2   bw_gain

ID, description, units MPD:53003   bw_gain   body weight   [g]  weight gain  
high-fat high-sucrose diet study
Data set, strains Nadeau2   B6.A consomic w/par   24 strains     sex: m     age: 5wks
Procedure body size and weight
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  STRAIN COMPARISON PLOT
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Nadeau2 - body weight weight gain



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested24 strains
Mean of the strain means20.4   g
Median of the strain means19.8   g
SD of the strain means± 4.70
Coefficient of variation (CV)0.231
Min–max range of strain means9.93   –   29.0   g
Mean sample size per strain39.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 23 25004.1172 1087.1355 58.732 < 0.0001
Residuals 954 17658.6529 18.5101


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J m 9.93 3.04   95 0.312 0.306 3.4, 19.3 -2.22
B6.A-Chr1 m 25.7 3.69   27 0.711 0.144 18.6, 36.9 1.14
B6.A-Chr10 m 19.1 5.31   76 0.609 0.278 9.88, 30.1 -0.27
B6.A-Chr11 m 20.4 6.01   36 1.0 0.295 6.88, 28.8 0.01
B6.A-Chr12 m 20.8 4.81   35 0.813 0.231 12.9, 30.4 0.09
B6.A-Chr13 m 18.9 3.67   27 0.707 0.194 11.9, 26.7 -0.31
B6.A-Chr14 m 20.3 3.6   34 0.617 0.177 14.2, 27.9 -0.01
B6.A-Chr15 m 17.8 4.71   27 0.906 0.265 11.2, 29.5 -0.55
B6.A-Chr16 m 22.5 4.83   37 0.794 0.215 12.3, 33.1 0.45
B6.A-Chr17 m 16.3 3.12   36 0.521 0.192 11.4, 23.4 -0.86
B6.A-Chr18 m 29.0 4.86   38 0.789 0.167 18.4, 40.9 1.84
B6.A-Chr19 m 26.3 5.58   34 0.957 0.212 14.9, 35.0 1.26
B6.A-Chr2 m 24.4 4.25   34 0.729 0.174 17.4, 32.9 0.86
B6.A-Chr3 m 15.5 4.89   40 0.773 0.315 6.84, 23.5 -1.03
B6.A-Chr4 m 17.2 3.61   38 0.586 0.21 10.9, 25.2 -0.67
B6.A-Chr5 m 20.3 3.54   38 0.574 0.174 12.2, 27.3 -0.01
B6.A-Chr6 m 16.4 2.95   38 0.478 0.18 10.5, 22.4 -0.84
B6.A-Chr7 m 13.7 3.54   34 0.608 0.259 8.79, 22.7 -1.42
B6.A-Chr8 m 17.4 3.68   34 0.631 0.211 11.1, 27.7 -0.63
B6.A-Chr9 m 27.5 3.64   33 0.634 0.132 18.7, 36.0 1.52
B6.A-ChrX m 26.9 3.34   36 0.557 0.124 19.4, 33.2 1.39
B6.A-ChrY m 19.1 3.96   31 0.712 0.208 11.6, 27.1 -0.27
B6.A-mt m 19.2 3.19   24 0.652 0.167 12.2, 24.5 -0.25
C57BL/6J m 24.1 5.29   96 0.54 0.22 10.1, 32.3 0.79


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 9.9252 0.4414 10.7914 9.0589
B6.A-Chr1 m 25.7256 0.828 27.3504 24.1007
B6.A-Chr10 m 19.0972 0.4935 20.0657 18.1287
B6.A-Chr11 m 20.3697 0.7171 21.7769 18.9625
B6.A-Chr12 m 20.8294 0.7272 22.2566 19.4023
B6.A-Chr13 m 18.947 0.828 20.5719 17.3222
B6.A-Chr14 m 20.3206 0.7378 21.7686 18.8726
B6.A-Chr15 m 17.7911 0.828 19.416 16.1662
B6.A-Chr16 m 22.5027 0.7073 23.8907 21.1147
B6.A-Chr17 m 16.2819 0.7171 17.6891 14.8748
B6.A-Chr18 m 29.0476 0.6979 30.4173 27.678
B6.A-Chr19 m 26.2747 0.7378 27.7227 24.8267
B6.A-Chr2 m 24.4129 0.7378 25.8609 22.965
B6.A-Chr3 m 15.5327 0.6803 16.8677 14.1978
B6.A-Chr4 m 17.195 0.6979 18.5647 15.8253
B6.A-Chr5 m 20.3474 0.6979 21.717 18.9777
B6.A-Chr6 m 16.3684 0.6979 17.7381 14.9988
B6.A-Chr7 m 13.6853 0.7378 15.1333 12.2373
B6.A-Chr8 m 17.3912 0.7378 18.8392 15.9432
B6.A-Chr9 m 27.4758 0.7489 28.9455 26.006
B6.A-ChrX m 26.9256 0.7171 28.3327 25.5184
B6.A-ChrY m 19.0832 0.7727 20.5997 17.5668
B6.A-mt m 19.1738 0.8782 20.8972 17.4503
C57BL/6J m 24.0689 0.4391 24.9306 23.2071




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA