Project measure / variable:   HMDPpheno8   propionylcarnitine

ID, description, units MPD:50330   propionylcarnitine   propionylcarnitine (16h fast), relative abundance    
Data set, strains HMDPpheno8   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno8 - propionylcarnitine (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means513092   None
Median of the strain means463625   None
SD of the strain means± 254534
Coefficient of variation (CV)0.496
Min–max range of strain means149858   –   1487499   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 1579706610163.97 75224124293.5225 2.8197 0.0035
Residuals 34 907041125717.832 26677680168.1715


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 333116.0 0.0   1   0.0 0.0 333116.0, 333116.0 -0.71
A/J m 1192244.0 296630.0   2   209749.0 0.249 982496.0, 1401993.0 2.67
AKR/J m 627470.0 0.0   1   0.0 0.0 627470.0, 627470.0 0.45
AXB10/PgnJ m 313080.0 0.0   1   0.0 0.0 313080.0, 313080.0 -0.79
AXB12/PgnJ m 748849.0 0.0   1   0.0 0.0 748849.0, 748849.0 0.93
AXB13/PgnJ m 549364.0 0.0   1   0.0 0.0 549364.0, 549364.0 0.14
AXB15/PgnJ m 850468.0 0.0   1   0.0 0.0 850468.0, 850468.0 1.33
AXB19a/PgnJ m 900173.0 0.0   1   0.0 0.0 900173.0, 900173.0 1.52
AXB19b/PgnJ m 653881.0 158851.0   2   112325.0 0.243 541556.0, 766206.0 0.55
AXB19/PgnJ m 615039.0 0.0   1   0.0 0.0 615039.0, 615039.0 0.4
AXB1/PgnJ m 1487499.0 0.0   1   0.0 0.0 1487499.0, 1487499.0 3.83
AXB23/PgnJ m 489960.0 0.0   1   0.0 0.0 489960.0, 489960.0 -0.09
AXB24/PgnJ m 521280.0 131670.0   2   93105.0 0.253 428175.0, 614385.0 0.03
AXB2/PgnJ m 1065029.0 0.0   1   0.0 0.0 1065029.0, 1065029.0 2.17
AXB4/PgnJ m 699209.0 0.0   1   0.0 0.0 699209.0, 699209.0 0.73
AXB5/PgnJ m 508201.0 0.0   1   0.0 0.0 508201.0, 508201.0 -0.02
AXB6/PgnJ m 522759.0 0.0   1   0.0 0.0 522759.0, 522759.0 0.04
AXB8/PgnJ m 382067.0 0.0   1   0.0 0.0 382067.0, 382067.0 -0.51
BALB/cJ m 559683.0 233316.0   3 134705.0 0.417 410824.0, 828579.0 0.18
BTBR T+ Itpr3tf/J m 149858.0 0.0   1   0.0 0.0 149858.0, 149858.0 -1.43
BUB/BnJ m 768411.0 0.0   1   0.0 0.0 768411.0, 768411.0 1.0
BXA11/PgnJ m 816051.0 0.0   1   0.0 0.0 816051.0, 816051.0 1.19
BXA12/PgnJ m 611173.0 0.0   1   0.0 0.0 611173.0, 611173.0 0.39
BXA13/PgnJ m 307623.0 0.0   1   0.0 0.0 307623.0, 307623.0 -0.81
BXA14/PgnJ m 300582.0 0.0   1   0.0 0.0 300582.0, 300582.0 -0.83
BXA16/PgnJ m 647719.0 245566.0   2   173641.0 0.379 474078.0, 821360.0 0.53
BXA1/PgnJ m 341900.0 0.0   1   0.0 0.0 341900.0, 341900.0 -0.67
BXA24/PgnJ m 478083.0 0.0   1   0.0 0.0 478083.0, 478083.0 -0.14
BXA25/PgnJ m 916309.0 0.0   1   0.0 0.0 916309.0, 916309.0 1.58
BXA26/PgnJ m 579591.0 0.0   1   0.0 0.0 579591.0, 579591.0 0.26
BXA2/PgnJ m 553321.0 0.0   1   0.0 0.0 553321.0, 553321.0 0.16
BXA4/PgnJ m 927773.0 0.0   1   0.0 0.0 927773.0, 927773.0 1.63
BXA7/PgnJ m 437399.0 0.0   1   0.0 0.0 437399.0, 437399.0 -0.3
BXA8/PgnJ m 322181.0 0.0   1   0.0 0.0 322181.0, 322181.0 -0.75
BXD11/TyJ m 485658.0 0.0   1   0.0 0.0 485658.0, 485658.0 -0.11
BXD12/TyJ m 314461.0 0.0   1   0.0 0.0 314461.0, 314461.0 -0.78
BXD13/TyJ m 437896.0 0.0   1   0.0 0.0 437896.0, 437896.0 -0.3
BXD14/TyJ m 206389.0 0.0   1   0.0 0.0 206389.0, 206389.0 -1.2
BXD15/TyJ m 362128.0 0.0   1   0.0 0.0 362128.0, 362128.0 -0.59
BXD18/TyJ m 354256.0 0.0   1   0.0 0.0 354256.0, 354256.0 -0.62
BXD19/TyJ m 332316.0 145267.0   2   102719.0 0.437 229596.0, 435035.0 -0.71
BXD1/TyJ m 594569.0 0.0   1   0.0 0.0 594569.0, 594569.0 0.32
BXD20/TyJ m 795012.0 0.0   1   0.0 0.0 795012.0, 795012.0 1.11
BXD21/TyJ m 508633.0 0.0   1   0.0 0.0 508633.0, 508633.0 -0.02
BXD22/TyJ m 318125.0 0.0   1   0.0 0.0 318125.0, 318125.0 -0.77
BXD24/TyJ m 559601.0 0.0   1   0.0 0.0 559601.0, 559601.0 0.18
BXD24/TyJ-Cep290rd16/J m 513916.0 0.0   1   0.0 0.0 513916.0, 513916.0 0.0
BXD28/TyJ m 310804.0 129354.0   2   91467.0 0.416 219336.0, 402271.0 -0.79
BXD29-Tlr4lps-2J/J m 236707.0 0.0   1   0.0 0.0 236707.0, 236707.0 -1.09
BXD2/TyJ m 377096.0 0.0   1   0.0 0.0 377096.0, 377096.0 -0.53
BXD32/TyJ m 633455.0 0.0   1   0.0 0.0 633455.0, 633455.0 0.47
BXD33/TyJ m 862135.0 0.0   1   0.0 0.0 862135.0, 862135.0 1.37
BXD34/TyJ m 418123.0 0.0   1   0.0 0.0 418123.0, 418123.0 -0.37
BXD36/TyJ m 177594.0 0.0   1   0.0 0.0 177594.0, 177594.0 -1.32
BXD38/TyJ m 678742.0 0.0   1   0.0 0.0 678742.0, 678742.0 0.65
BXD39/TyJ m 410750.0 0.0   1   0.0 0.0 410750.0, 410750.0 -0.4
BXD40/TyJ m 277016.0 0.0   1   0.0 0.0 277016.0, 277016.0 -0.93
BXD42/TyJ m 598757.0 0.0   1   0.0 0.0 598757.0, 598757.0 0.34
BXD5/TyJ m 240315.0 0.0   1   0.0 0.0 240315.0, 240315.0 -1.07
BXD6/TyJ m 292977.0 0.0   1   0.0 0.0 292977.0, 292977.0 -0.86
BXD8/TyJ m 1138247.0 0.0   1   0.0 0.0 1138247.0, 1138247.0 2.46
BXD9/TyJ m 218212.0 0.0   1   0.0 0.0 218212.0, 218212.0 -1.16
BXH10/TyJ m 210486.0 0.0   1   0.0 0.0 210486.0, 210486.0 -1.19
BXH19/TyJ m 194397.0 0.0   1   0.0 0.0 194397.0, 194397.0 -1.25
BXH20/KccJ m 414754.0 0.0   1   0.0 0.0 414754.0, 414754.0 -0.39
BXH22/KccJ m 435689.0 0.0   1   0.0 0.0 435689.0, 435689.0 -0.3
BXH2/TyJ m 445846.0 0.0   1   0.0 0.0 445846.0, 445846.0 -0.26
BXH4/TyJ m 404748.0 6012.0   2   4251.0 0.0149 400497.0, 408998.0 -0.43
BXH6/TyJ m 189087.0 0.0   1   0.0 0.0 189087.0, 189087.0 -1.27
BXH7/TyJ m 358630.0 0.0   1   0.0 0.0 358630.0, 358630.0 -0.61
BXH8/TyJ m 633266.0 0.0   1   0.0 0.0 633266.0, 633266.0 0.47
BXH9/TyJ m 934066.0 0.0   1   0.0 0.0 934066.0, 934066.0 1.65
C3H/HeJ m 318475.0 54668.0   2   38656.0 0.172 279819.0, 357131.0 -0.76
C57BL/6J m 529969.0 181609.0   5 81218.0 0.343 386869.0, 841299.0 0.07
C57L/J m 868214.0 0.0   1   0.0 0.0 868214.0, 868214.0 1.4
C58/J m 1052595.0 0.0   1   0.0 0.0 1052595.0, 1052595.0 2.12
CAST/EiJ m 189349.0 0.0   1   0.0 0.0 189349.0, 189349.0 -1.27
CBA/J m 193253.0 0.0   1   0.0 0.0 193253.0, 193253.0 -1.26
CE/J m 357467.0 0.0   1   0.0 0.0 357467.0, 357467.0 -0.61
CXB11/HiAJ m 339875.0 81535.0   2   57654.0 0.24 282220.0, 397529.0 -0.68
CXB12/HiAJ m 574364.0 432968.0   2   306154.0 0.754 268209.0, 880518.0 0.24
CXB13/HiAJ m 441185.0 33486.0   3 19333.0 0.0759 402792.0, 464357.0 -0.28
CXB1/ByJ m 493839.0 150801.0   3 87065.0 0.305 341099.0, 642624.0 -0.08
CXB2/ByJ m 540649.0 197689.0   3 114136.0 0.366 314191.0, 678747.0 0.11
CXB3/ByJ m 487921.0 3037.0   2   2147.0 0.00622 485773.0, 490068.0 -0.1
CXB4/ByJ m 538271.0 9091.0   2   6428.0 0.0169 531843.0, 544700.0 0.1
CXB6/ByJ m 449167.0 148489.0   3 85730.0 0.331 278237.0, 546308.0 -0.25
CXB7/ByJ m 390390.0 31467.0   2   22250.0 0.0806 368140.0, 412641.0 -0.48
CXB8/HiAJ m 386639.0 112719.0   3 65078.0 0.292 306948.0, 515606.0 -0.5
CXB9/HiAJ m 280919.0 33237.0   3 19189.0 0.118 245548.0, 311501.0 -0.91
DBA/2J m 546004.0 117929.0   4 58965.0 0.216 466564.0, 721422.0 0.13
FVB/NJ m 1075403.0 0.0   1   0.0 0.0 1075403.0, 1075403.0 2.21
I/LnJ m 361832.0 0.0   1   0.0 0.0 361832.0, 361832.0 -0.59
KK/HlJ m 237756.0 0.0   1   0.0 0.0 237756.0, 237756.0 -1.08
LG/J m 359938.0 0.0   1   0.0 0.0 359938.0, 359938.0 -0.6
LP/J m 478781.0 0.0   1   0.0 0.0 478781.0, 478781.0 -0.13
MA/MyJ m 933675.0 0.0   1   0.0 0.0 933675.0, 933675.0 1.65
NOD/ShiLtJ m 662322.0 0.0   1   0.0 0.0 662322.0, 662322.0 0.59
NON/ShiLtJ m 321909.0 0.0   1   0.0 0.0 321909.0, 321909.0 -0.75
NZW/LacJ m 426254.0 0.0   1   0.0 0.0 426254.0, 426254.0 -0.34
PL/J m 734267.0 0.0   1   0.0 0.0 734267.0, 734267.0 0.87
RIIIS/J m 620710.0 0.0   1   0.0 0.0 620710.0, 620710.0 0.42
SEA/GnJ m 395961.0 0.0   1   0.0 0.0 395961.0, 395961.0 -0.46
SJL/J m 281902.0 0.0   1   0.0 0.0 281902.0, 281902.0 -0.91
SM/J m 287618.0 0.0   1   0.0 0.0 287618.0, 287618.0 -0.89
SWR/J m 178628.0 0.0   1   0.0 0.0 178628.0, 178628.0 -1.31


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 1192244.45 115493.8963 1426956.2866 957532.6134
AXB19b/PgnJ m 653881.2 115493.8963 888593.0366 419169.3634
AXB24/PgnJ m 521280.05 115493.8963 755991.8866 286568.2134
BALB/cJ m 559682.7 94300.3715 751324.1121 368041.2879
BXA16/PgnJ m 647718.65 115493.8963 882430.4866 413006.8134
BXD19/TyJ m 332315.8 115493.8963 567027.6366 97603.9634
BXD28/TyJ m 310803.5 115493.8963 545515.3366 76091.6634
BXH4/TyJ m 404747.5 115493.8963 639459.3366 170035.6634
C3H/HeJ m 318475.0 115493.8963 553186.8366 83763.1634
C57BL/6J m 529968.6 73044.7536 678413.3995 381523.8005
CXB11/HiAJ m 339874.8 115493.8963 574586.6366 105162.9634
CXB12/HiAJ m 574363.65 115493.8963 809075.4866 339651.8134
CXB13/HiAJ m 441185.0 94300.3715 632826.4121 249543.5879
CXB1/ByJ m 493839.3 94300.3715 685480.7121 302197.8879
CXB2/ByJ m 540649.0333 94300.3715 732290.4454 349007.6212
CXB3/ByJ m 487920.75 115493.8963 722632.5866 253208.9134
CXB4/ByJ m 538271.4 115493.8963 772983.2366 303559.5634
CXB6/ByJ m 449166.9667 94300.3715 640808.3788 257525.5546
CXB7/ByJ m 390390.4 115493.8963 625102.2366 155678.5634
CXB8/HiAJ m 386639.3667 94300.3715 578280.7788 194997.9546
CXB9/HiAJ m 280918.9 94300.3715 472560.3121 89277.4879
DBA/2J m 546004.475 81666.5173 711970.8063 380038.1437




  GWAS USING LINEAR MIXED MODELS