Project measure / variable:   Brugnara1   MCV

ID, description, units MPD:47408   MCV   mean RBC corpuscular volume (MCV)   [fL]  
Data set, strains Brugnara1   inbred   10 strains     sex: both     age: 8wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Brugnara1 - mean RBC corpuscular volume (MCV)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means48.1   fL 48.3   fL
Median of the strain means48.2   fL 48.5   fL
SD of the strain means± 2.07 ± 2.56
Coefficient of variation (CV)0.0430 0.0530
Min–max range of strain means43.2   –   51.0   fL 43.1   –   53.0   fL
Mean sample size per strain32.1   mice 30.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 9.3985 9.3985 4.2186 0.0404
strain 9 2649.4311 294.3812 132.1359 < 0.0001
sex:strain 9 100.4121 11.1569 5.0079 < 0.0001
Residuals 608 1354.5435 2.2279


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 47.5 1.64   33 0.286 0.0346 42.5, 51.0 -0.29
129S1/SvImJ m 48.2 2.04   34 0.349 0.0423 42.8, 55.7 -0.05
A/J f 47.2 1.67   36 0.278 0.0353 44.9, 52.8 -0.43
A/J m 46.2 1.53   32 0.271 0.0332 42.8, 48.6 -0.84
BALB/cJ f 48.8 1.17   26 0.23 0.024 45.9, 50.1 0.34
BALB/cJ m 49.0 1.74   30 0.318 0.0356 46.3, 55.3 0.26
C3H/HeJ f 49.6 1.18   30 0.216 0.0239 45.2, 51.8 0.73
C3H/HeJ m 50.4 1.07   30 0.196 0.0213 48.9, 52.8 0.8
C57BL/6J f 47.7 1.31   35 0.221 0.0274 46.0, 50.6 -0.19
C57BL/6J m 48.4 1.38   33 0.241 0.0286 46.5, 51.3 0.02
C57BLKS/J f 48.4 1.15   32 0.203 0.0238 44.6, 50.0 0.15
C57BLKS/J m 48.5 0.995   39 0.159 0.0205 46.0, 50.1 0.06
CBA/J f 49.5 0.94   32 0.166 0.019 47.1, 51.1 0.68
CBA/J m 48.8 1.65   34 0.283 0.0338 42.7, 50.9 0.18
DBA/2J f 43.2 0.793   30 0.145 0.0184 41.7, 44.8 -2.36
DBA/2J m 43.1 1.45   26 0.284 0.0336 38.1, 45.3 -2.05
NZW/LacJ f 48.0 0.916   32 0.162 0.0191 45.8, 49.3 -0.04
NZW/LacJ m 47.8 2.9   25 0.579 0.0606 40.4, 54.6 -0.21
SM/J f 51.0 2.1   33 0.366 0.0413 45.0, 53.2 1.41
SM/J m 53.0 0.626   26 0.123 0.0118 51.8, 54.3 1.82


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 47.5242 0.2598 48.0345 47.014
129S1/SvImJ m 48.15 0.256 48.6527 47.6473
A/J f 47.2361 0.2488 47.7247 46.7476
A/J m 46.1813 0.2639 46.6994 45.6631
BALB/cJ f 48.7769 0.2927 49.3518 48.2021
BALB/cJ m 48.96 0.2725 49.4952 48.4248
C3H/HeJ f 49.6067 0.2725 50.1418 49.0715
C3H/HeJ m 50.4067 0.2725 50.9418 49.8715
C57BL/6J f 47.7457 0.2523 48.2412 47.2502
C57BL/6J m 48.3515 0.2598 48.8618 47.8412
C57BLKS/J f 48.3625 0.2639 48.8807 47.8443
C57BLKS/J m 48.4974 0.239 48.9668 48.0281
CBA/J f 49.4719 0.2639 49.9901 48.9537
CBA/J m 48.8265 0.256 49.3292 48.3238
DBA/2J f 43.1767 0.2725 43.7118 42.6415
DBA/2J m 43.1423 0.2927 43.7172 42.5674
NZW/LacJ f 48.025 0.2639 48.5432 47.5068
NZW/LacJ m 47.76 0.2985 48.3463 47.1737
SM/J f 50.9697 0.2598 51.48 50.4594
SM/J m 52.9654 0.2927 53.5403 52.3905


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 47.8371 0.1824 48.1953 47.479
A/J both 46.7087 0.1813 47.0648 46.3526
BALB/cJ both 48.8685 0.2 49.2612 48.4757
C3H/HeJ both 50.0067 0.1927 50.3851 49.6282
C57BL/6J both 48.0486 0.1811 48.4042 47.693
C57BLKS/J both 48.43 0.178 48.7796 48.0804
CBA/J both 49.1492 0.1838 49.5102 48.7882
DBA/2J both 43.1595 0.2 43.5522 42.7668
NZW/LacJ both 47.8925 0.1992 48.2837 47.5013
SM/J both 51.9675 0.1957 52.3519 51.5832




  GWAS USING LINEAR MIXED MODELS