Project measure / variable:   Rusyn5   steatosis_hf

ID, description, units MPD:43013   steatosis_hf   liver steatosis (0-4)   [score]  high-fat only  
high-fat diet and ethanol study
Data set, strains Rusyn5   inbred   14 strains     sex: m     age: 8-14wks
Procedure histopathology
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  STRAIN COMPARISON PLOT
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Rusyn5 - liver steatosis (0-4) high-fat only



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested14 strains
Mean of the strain means0.107   score
Median of the strain means0   score
SD of the strain means± 0.213
Coefficient of variation (CV)1.99
Min–max range of strain means0   –   0.667   score
Mean sample size per strain3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 13 1.7679 0.136 7.6154 < 0.0001
Residuals 28 0.5 0.0179


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 0.0 0.0   3 0.0 0.0 -0.5
AKR/J m 0.0 0.0   3 0.0 0.0 -0.5
BALB/cByJ m 0.167 0.289   3 0.167 1.73 0.28
BALB/cJ m 0.0 0.0   3 0.0 0.0 -0.5
BTBR T+ Itpr3tf/J m 0.0 0.0   3 0.0 0.0 -0.5
C3H/HeJ m 0.167 0.289   3 0.167 1.73 0.28
C57BL/10J m 0.0 0.0   3 0.0 0.0 -0.5
DBA/2J m 0.0 0.0   3 0.0 0.0 -0.5
FVB/NJ m 0.0 0.0   3 0.0 0.0 -0.5
KK/HlJ m 0.667 0.289   3 0.167 0.433 0.5, 1.0 2.63
MOLF/EiJ m 0.5 0.0   3 0.0 0.0 0.5, 0.5 1.84
NZW/LacJ m 0.0 0.0   3 0.0 0.0 -0.5
PWD/PhJ m 0.0 0.0   3 0.0 0.0 -0.5
WSB/EiJ m 0.0 0.0   3 0.0 0.0 -0.5


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 0.0 0.0772 0.158 -0.158
AKR/J m 0.0 0.0772 0.158 -0.158
BALB/cByJ m 0.1667 0.0772 0.3247 0.0086
BALB/cJ m 0.0 0.0772 0.158 -0.158
BTBR T+ Itpr3tf/J m 0.0 0.0772 0.158 -0.158
C3H/HeJ m 0.1667 0.0772 0.3247 0.0086
C57BL/10J m 0.0 0.0772 0.158 -0.158
DBA/2J m 0.0 0.0772 0.158 -0.158
FVB/NJ m 0.0 0.0772 0.158 -0.158
KK/HlJ m 0.6667 0.0772 0.8247 0.5086
MOLF/EiJ m 0.5 0.0772 0.658 0.342
NZW/LacJ m 0.0 0.0772 0.158 -0.158
PWD/PhJ m 0.0 0.0772 0.158 -0.158
WSB/EiJ m 0.0 0.0772 0.158 -0.158




  GWAS USING LINEAR MIXED MODELS