Project measure / variable:   Petryshen1   PPI_80dB

ID, description, units MPD:34709   PPI_80dB   percent prepulse inhibition (PPI) evoked by 120 dB tone   [%]  80 dB prepulse stimulus  
Data set, strains Petryshen1   B6.A consomic   22 strains     sex: m     age: 7-9wks
Procedure acoustic startle test
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  STRAIN COMPARISON PLOT
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Petryshen1 - percent prepulse inhibition (PPI) evoked by 120 dB tone 80 dB prepulse stimulus



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested22 strains
Mean of the strain means38.4   %
Median of the strain means37.1   %
SD of the strain means± 8.26
Coefficient of variation (CV)0.215
Min–max range of strain means26.0   –   58.7   %
Mean sample size per strain23.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 33110.3889 1576.6852 9.0765 < 0.0001
Residuals 570 99014.969 173.7105


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.A-Chr1 m 38.3 13.3   25 2.66 0.347 11.2, 67.1 -0.01
B6.A-Chr10 m 51.5 14.0   25 2.8 0.272 25.5, 72.9 1.59
B6.A-Chr11 m 58.7 18.2   25 3.64 0.311 28.1, 92.8 2.46
B6.A-Chr12 m 37.0 13.8   25 2.77 0.374 14.5, 67.7 -0.17
B6.A-Chr14 m 29.7 10.7   20 2.4 0.362 7.33, 50.8 -1.05
B6.A-Chr15 m 32.2 11.0   25 2.21 0.342 15.4, 61.6 -0.75
B6.A-Chr16 m 52.7 15.1   12 4.36 0.287 30.1, 74.1 1.73
B6.A-Chr17 m 44.1 13.9   17 3.36 0.314 12.1, 62.1 0.69
B6.A-Chr18 m 32.5 8.66   18 2.04 0.267 16.0, 45.8 -0.71
B6.A-Chr19 m 35.4 11.9   19 2.73 0.337 14.0, 62.8 -0.36
B6.A-Chr2 m 30.2 11.0   24 2.24 0.365 8.29, 51.7 -0.99
B6.A-Chr3 m 30.7 11.5   25 2.31 0.376 2.68, 49.5 -0.93
B6.A-Chr4 m 26.0 10.3   25 2.06 0.397 11.8, 54.7 -1.5
B6.A-Chr5 m 38.0 14.8   25 2.97 0.39 7.2, 66.0 -0.05
B6.A-Chr6 m 37.4 13.3   25 2.66 0.356 9.18, 65.7 -0.12
B6.A-Chr7 m 37.2 14.2   25 2.83 0.381 8.68, 66.8 -0.14
B6.A-Chr8 m 31.5 13.4   25 2.69 0.426 3.24, 51.2 -0.83
B6.A-Chr9 m 41.7 13.4   25 2.68 0.321 20.6, 65.9 0.4
B6.A-ChrX m 36.2 10.8   19 2.48 0.299 14.2, 54.3 -0.26
B6.A-ChrY m 47.7 12.7   25 2.54 0.267 19.0, 72.1 1.13
B6.A-mt m 40.9 14.9   23 3.11 0.364 13.5, 69.6 0.31
C57BL/6J m 34.6 13.5   115 1.25 0.389 5.55, 71.1 -0.46


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.A-Chr1 m 38.308 2.636 43.4854 33.1306
B6.A-Chr10 m 51.528 2.636 56.7054 46.3506
B6.A-Chr11 m 58.664 2.636 63.8414 53.4866
B6.A-Chr12 m 37.032 2.636 42.2094 31.8546
B6.A-Chr14 m 29.6765 2.9471 35.465 23.888
B6.A-Chr15 m 32.248 2.636 37.4254 27.0706
B6.A-Chr16 m 52.6667 3.8047 60.1396 45.1937
B6.A-Chr17 m 44.0882 3.1966 50.3668 37.8097
B6.A-Chr18 m 32.4556 3.1065 38.5572 26.3539
B6.A-Chr19 m 35.3737 3.0237 41.3126 29.4348
B6.A-Chr2 m 30.1621 2.6903 35.4463 24.8779
B6.A-Chr3 m 30.7072 2.636 35.8846 25.5298
B6.A-Chr4 m 25.968 2.636 31.1454 20.7906
B6.A-Chr5 m 38.044 2.636 43.2214 32.8666
B6.A-Chr6 m 37.3792 2.636 42.5566 32.2018
B6.A-Chr7 m 37.1592 2.636 42.3366 31.9818
B6.A-Chr8 m 31.5096 2.636 36.687 26.3322
B6.A-Chr9 m 41.7 2.636 46.8774 36.5226
B6.A-ChrX m 36.1737 3.0237 42.1126 30.2348
B6.A-ChrY m 47.712 2.636 52.8894 42.5346
B6.A-mt m 40.9217 2.7482 46.3196 35.5239
C57BL/6J m 34.5635 1.229 36.9775 32.1495




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA