Project measure / variable:   Moy1   SnSTR1_nov

ID, description, units MPD:30121   SnSTR1_nov   time spent sniffing cage with stranger1 (former novel mouse), 10 min test   [s]  
Data set, strains Moy1   inbred   17 strains     sex: m     age: 6-7wks
Procedure three chamber assay
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  STRAIN COMPARISON PLOT
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Moy1 - time spent sniffing cage with stranger1 (former novel mouse), 10 min test



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested17 strains
Mean of the strain means43.0   s
Median of the strain means35.1   s
SD of the strain means± 19.2
Coefficient of variation (CV)0.445
Min–max range of strain means19.1   –   87.1   s
Mean sample size per strain22.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 16 118771.2277 7423.2017 6.8232 < 0.0001
Residuals 369 401448.6006 1087.9366


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 51.3 51.0   20 11.4 0.994 0.43
A/J m 47.0 37.4   19 8.57 0.795 0.21
AKR/J m 54.9 34.0   40 5.38 0.62 11.8, 156.0 0.62
BALB/cByJ m 29.6 27.0   20 6.04 0.913 -0.7
BTBR T+ Itpr3tf/J m 23.3 36.1   24 7.37 1.55 -1.03
C3H/HeJ m 87.1 51.4   19 11.8 0.591 30.7, 234.0 2.3
C57BL/6J m 35.1 20.0   39 3.2 0.57 5.0, 82.6 -0.41
C57L/J m 32.1 17.9   19 4.11 0.558 6.7, 65.2 -0.57
C58/J m 25.7 13.2   20 2.95 0.513 3.9, 50.5 -0.9
DBA/2J m 31.4 25.9   38 4.2 0.825 0.4, 110.0 -0.61
FVB/NJ m 35.0 23.4   17 5.67 0.668 7.5, 79.6 -0.42
NOD/ShiLtJ m 50.1 36.6   20 8.19 0.732 5.6, 132.0 0.37
NZB/BlNJ m 44.5 40.7   20 9.1 0.915 0.08
PERA/EiJ m 62.6 34.7   10 11.0 0.554 15.6, 113.0 1.02
PL/J m 25.6 12.1   20 2.72 0.475 4.2, 49.3 -0.91
SJL/J m 19.1 20.4   22 4.34 1.07 -1.25
SWR/J m 76.8 54.4   19 12.5 0.707 9.8, 243.0 1.76


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 51.29 7.3754 65.7931 36.7869
A/J m 47.0053 7.567 61.8852 32.1254
AKR/J m 54.8525 5.2152 65.1078 44.5972
BALB/cByJ m 29.59 7.3754 44.0931 15.0869
BTBR T+ Itpr3tf/J m 23.2625 6.7328 36.502 10.023
C3H/HeJ m 87.0684 7.567 101.9483 72.1885
C57BL/6J m 35.0667 5.2816 45.4526 24.6808
C57L/J m 32.1158 7.567 46.9957 17.2359
C58/J m 25.69 7.3754 40.1931 11.1869
DBA/2J m 31.3579 5.3507 41.8796 20.8362
FVB/NJ m 34.9824 7.9998 50.7132 19.2515
NOD/ShiLtJ m 50.085 7.3754 64.5881 35.5819
NZB/BlNJ m 44.515 7.3754 59.0181 30.0119
PERA/EiJ m 62.61 10.4304 83.1205 42.0995
PL/J m 25.57 7.3754 40.0731 11.0669
SJL/J m 19.0682 7.0322 32.8964 5.24
SWR/J m 76.8316 7.567 91.7115 61.9517




  GWAS USING LINEAR MIXED MODELS