Project measure / variable:   Moy1   DurCEN_nov

ID, description, units MPD:30110   DurCEN_nov   time spent in center chamber, 10 min test   [s]  
Data set, strains Moy1   inbred   17 strains     sex: m     age: 6-7wks
Procedure three chamber assay
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  STRAIN COMPARISON PLOT
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Moy1 - time spent in center chamber, 10 min test



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested17 strains
Mean of the strain means151   s
Median of the strain means141   s
SD of the strain means± 48.4
Coefficient of variation (CV)0.321
Min–max range of strain means89.0   –   275   s
Mean sample size per strain22.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 16 747490.6025 46718.1627 6.3218 < 0.0001
Residuals 371 2741676.8898 7389.9647


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 110.0 77.0   20 17.2 0.699 10.0, 297.0 -0.84
A/J m 115.0 137.0   20 30.7 1.19 19.0, 600.0 -0.74
AKR/J m 141.0 41.6   40 6.58 0.295 64.0, 273.0 -0.2
BALB/cByJ m 275.0 162.0   20 36.2 0.589 89.0, 600.0 2.57
BTBR T+ Itpr3tf/J m 99.7 99.5   24 20.3 0.998 10.0, 499.0 -1.06
C3H/HeJ m 117.0 41.0   19 9.4 0.349 62.0, 200.0 -0.7
C57BL/6J m 166.0 59.3   40 9.37 0.356 67.0, 274.0 0.31
C57L/J m 137.0 34.6   19 7.93 0.253 94.0, 224.0 -0.29
C58/J m 176.0 56.2   20 12.6 0.319 85.0, 318.0 0.52
DBA/2J m 187.0 118.0   38 19.1 0.631 34.0, 539.0 0.75
FVB/NJ m 161.0 71.6   17 17.4 0.445 39.0, 355.0 0.21
NOD/ShiLtJ m 212.0 45.7   20 10.2 0.216 141.0, 300.0 1.27
NZB/BlNJ m 99.8 64.0   20 14.3 0.641 23.0, 246.0 -1.05
PERA/EiJ m 89.0 53.4   10 16.9 0.6 21.0, 200.0 -1.28
PL/J m 164.0 33.9   20 7.58 0.207 97.0, 212.0 0.27
SJL/J m 191.0 139.0   22 29.5 0.724 13.0, 600.0 0.83
SWR/J m 123.0 59.1   19 13.6 0.479 40.0, 250.0 -0.57


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 110.1 19.2223 147.8984 72.3016
A/J m 114.95 19.2223 152.7484 77.1516
AKR/J m 141.025 13.5922 167.7525 114.2975
BALB/cByJ m 275.0 19.2223 312.7984 237.2016
BTBR T+ Itpr3tf/J m 99.7083 17.5475 134.2134 65.2033
C3H/HeJ m 117.3684 19.7217 156.1488 78.5881
C57BL/6J m 166.5 13.5922 193.2275 139.7725
C57L/J m 136.7368 19.7217 175.5172 97.9565
C58/J m 176.15 19.2223 213.9484 138.3516
DBA/2J m 186.9737 13.9453 214.3955 159.5518
FVB/NJ m 160.8235 20.8496 201.8216 119.8254
NOD/ShiLtJ m 211.95 19.2223 249.7484 174.1516
NZB/BlNJ m 99.75 19.2223 137.5484 61.9516
PERA/EiJ m 89.0 27.1845 142.455 35.545
PL/J m 163.95 19.2223 201.7484 126.1516
SJL/J m 191.3182 18.3278 227.3575 155.2788
SWR/J m 123.2632 19.7217 162.0435 84.4828




  GWAS USING LINEAR MIXED MODELS