Project measure / variable:   Cheverud1   gonadal_pctfat_hifat

ID, description, units MPD:17879   gonadal_pctfat_hifat   gonadal fat pad weight as percentage of body weight   [%]  high-fat diet  
high-fat diet study
Data set, strains Cheverud1   LGXSM w/par   17 strains     sex: both     age: 20-30wks
Procedure fat pad weights
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  STRAIN COMPARISON PLOT
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Cheverud1 - gonadal fat pad weight as percentage of body weight high-fat diet



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested16 strains17 strains
Mean of the strain means7.92   % 5.85   %
Median of the strain means7.55   % 6.53   %
SD of the strain means± 3.24 ± 1.89
Coefficient of variation (CV)0.409 0.324
Min–max range of strain means3.99   –   17.9   % 2.40   –   8.21   %
Mean sample size per strain7.9   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 284.2175 284.2175 88.6115 < 0.0001
strain 15 953.3095 63.554 19.8144 < 0.0001
sex:strain 15 399.2244 26.615 8.2978 < 0.0001
Residuals 224 718.4702 3.2075


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
LGXSM10 f 8.53 1.55   9 0.517 0.182 6.24, 11.5 0.19
LGXSM10 m 6.53 1.26   10 0.397 0.193 3.78, 8.44 0.36
LGXSM15 f 7.44 2.39   9 0.797 0.321 4.08, 10.7 -0.15
LGXSM15 m 4.72 1.24   11 0.373 0.262 2.92, 6.34 -0.59
LGXSM18 f 4.81 0.46   8 0.163 0.0956 4.15, 5.36 -0.96
LGXSM18 m 4.33 0.569   8 0.201 0.131 3.49, 5.04 -0.8
LGXSM19 f 8.96 3.39   9 1.13 0.378 2.31, 12.9 0.32
LGXSM19 m 6.96 0.975   8 0.345 0.14 5.79, 8.49 0.59
LGXSM20 f 6.78 0.728   8 0.257 0.107 6.08, 8.15 -0.35
LGXSM20 m 2.4 1.21   6 0.495 0.505 1.08, 4.26 -1.82
LGXSM22 f 7.66 0.888   13 0.246 0.116 6.47, 10.1 -0.08
LGXSM22 m 4.02 0.504   12 0.146 0.125 2.96, 4.75 -0.96
LGXSM23 f 8.41 3.18   8 1.13 0.379 1.76, 11.5 0.15
LGXSM23 m 7.76 1.48   8 0.523 0.191 4.78, 9.92 1.01
LGXSM31 f 17.9 3.34   5 1.5 0.187 14.9, 21.9 3.08
LGXSM31 m 7.41 1.15   6 0.47 0.155 5.42, 8.53 0.83
LGXSM33 f 9.34 1.16   7 0.438 0.124 7.11, 10.8 0.44
LGXSM33 m 3.19 1.15   7 0.436 0.362 2.15, 5.64 -1.4
LGXSM35 f 5.61 2.21   7 0.836 0.394 3.4, 8.9 -0.71
LGXSM35 m 5.03 1.7   8 0.602 0.339 3.46, 8.24 -0.43
LGXSM39 f 3.99 1.86   8 0.657 0.466 1.05, 7.35 -1.21
LGXSM39 m 3.24 2.24   9 0.746 0.69 0.51, 6.87 -1.38
LGXSM4 f 5.96 1.76   8 0.622 0.295 2.37, 8.24 -0.6
LGXSM4 m 5.74 1.19   6 0.487 0.208 4.62, 7.78 -0.06
LGXSM45 f 4.84 2.02   5 0.904 0.418 1.61, 6.43 -0.95
LGXSM45 m 7.71 0.5   3 0.288 0.0648 7.15, 8.11 0.98
LGXSM46 f 10.7 3.53   9 1.18 0.33 4.75, 16.5 0.86
LGXSM46 m 8.21 1.37   10 0.433 0.167 6.43, 9.88 1.25
LGXSM48 f 8.58 2.56   7 0.967 0.298 4.23, 11.2 0.2
LGXSM48 m 7.69 0.992   8 0.351 0.129 6.32, 8.88 0.97
LGXSM5 f 7.19 1.57   8 0.554 0.218 5.37, 9.58 -0.22
LGXSM5 m 7.04 0.854   8 0.302 0.121 5.2, 7.81 0.63
SM/J m 7.39 0.728   6 0.297 0.0985 6.44, 8.5 0.82


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 f 8.53 0.597 9.7064 7.3536
LGXSM10 m 6.525 0.5663 7.641 5.409
LGXSM15 f 7.4444 0.597 8.6209 6.268
LGXSM15 m 4.7191 0.54 5.7832 3.655
LGXSM18 f 4.8075 0.6332 6.0553 3.5597
LGXSM18 m 4.33 0.6332 5.5778 3.0822
LGXSM19 f 8.9633 0.597 10.1397 7.7869
LGXSM19 m 6.9637 0.6332 8.2115 5.716
LGXSM20 f 6.78 0.6332 8.0278 5.5322
LGXSM20 m 2.4 0.7311 3.8408 0.9592
LGXSM22 f 7.6585 0.4967 8.6373 6.6796
LGXSM22 m 4.025 0.517 5.0438 3.0062
LGXSM23 f 8.405 0.6332 9.6528 7.1572
LGXSM23 m 7.7625 0.6332 9.0103 6.5147
LGXSM31 f 17.92 0.8009 19.4983 16.3417
LGXSM31 m 7.4133 0.7311 8.8541 5.9725
LGXSM33 f 9.34 0.6769 10.6739 8.0061
LGXSM33 m 3.1871 0.6769 4.5211 1.8532
LGXSM35 f 5.6071 0.6769 6.9411 4.2732
LGXSM35 m 5.025 0.6332 6.2728 3.7772
LGXSM39 f 3.99 0.6332 5.2378 2.7422
LGXSM39 m 3.2444 0.597 4.4209 2.068
LGXSM4 f 5.9625 0.6332 7.2103 4.7147
LGXSM4 m 5.7367 0.7311 7.1775 4.2959
LGXSM45 f 4.838 0.8009 6.4163 3.2597
LGXSM45 m 7.71 1.034 9.7476 5.6724
LGXSM46 f 10.6933 0.597 11.8697 9.5169
LGXSM46 m 8.215 0.5663 9.331 7.099
LGXSM48 f 8.5814 0.6769 9.9154 7.2475
LGXSM48 m 7.6912 0.6332 8.939 6.4435
LGXSM5 f 7.1912 0.6332 8.439 5.9435
LGXSM5 m 7.0437 0.6332 8.2915 5.796


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 both 7.5275 0.4114 8.3383 6.7167
LGXSM15 both 6.0818 0.4025 6.8749 5.2886
LGXSM18 both 4.5688 0.4477 5.4511 3.6864
LGXSM19 both 7.9635 0.4351 8.821 7.1061
LGXSM20 both 4.59 0.4836 5.543 3.637
LGXSM22 both 5.8417 0.3585 6.5481 5.1353
LGXSM23 both 8.0837 0.4477 8.9661 7.2014
LGXSM31 both 12.6667 0.5422 13.7352 11.5981
LGXSM33 both 6.2636 0.4786 7.2068 5.3203
LGXSM35 both 5.3161 0.4634 6.2293 4.4028
LGXSM39 both 3.6172 0.4351 4.4747 2.7598
LGXSM4 both 5.8496 0.4836 6.8026 4.8966
LGXSM45 both 6.274 0.654 7.5627 4.9853
LGXSM46 both 9.4542 0.4114 10.265 8.6434
LGXSM48 both 8.1363 0.4634 9.0496 7.2231
LGXSM5 both 7.1175 0.4477 7.9998 6.2352




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA