Project measure / variable:   Cheverud1   liverwt_adj_hifat

ID, description, units MPD:17873   liverwt_adj_hifat   liver weight as percentage of body weight   [%]  high-fat diet  
high-fat diet study
Data set, strains Cheverud1   LGXSM w/par   17 strains     sex: both     age: 20-30wks
Procedure organ weights
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  STRAIN COMPARISON PLOT
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Cheverud1 - liver weight as percentage of body weight high-fat diet



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested16 strains17 strains
Mean of the strain means5.36   % 5.68   %
Median of the strain means5.27   % 5.38   %
SD of the strain means± 1.17 ± 1.61
Coefficient of variation (CV)0.219 0.284
Min–max range of strain means3.55   –   8.36   % 3.65   –   10.0   %
Mean sample size per strain7.9   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 3.5456 3.5456 3.9697 0.0475
strain 15 545.0608 36.3374 40.6836 < 0.0001
sex:strain 15 64.4058 4.2937 4.8073 < 0.0001
Residuals 225 200.9635 0.8932


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
LGXSM10 f 5.74 0.589   9 0.196 0.103 4.92, 6.67 0.32
LGXSM10 m 5.14 0.395   10 0.125 0.0768 4.47, 5.98 -0.33
LGXSM15 f 4.43 0.765   9 0.255 0.173 3.37, 5.78 -0.79
LGXSM15 m 3.94 0.567   11 0.171 0.144 3.05, 4.87 -1.08
LGXSM18 f 4.51 1.52   8 0.537 0.337 0.82, 5.53 -0.73
LGXSM18 m 6.0 1.27   8 0.448 0.211 4.37, 8.63 0.2
LGXSM19 f 5.55 1.02   9 0.341 0.184 4.33, 7.38 0.16
LGXSM19 m 4.99 0.549   8 0.194 0.11 4.33, 5.86 -0.43
LGXSM20 f 4.36 0.302   8 0.107 0.0694 4.04, 4.77 -0.85
LGXSM20 m 5.59 0.397   6 0.162 0.071 4.88, 5.98 -0.05
LGXSM22 f 8.36 1.81   13 0.502 0.216 4.71, 10.5 2.55
LGXSM22 m 10.0 1.5   12 0.432 0.149 6.95, 12.5 2.68
LGXSM23 f 6.55 1.04   8 0.367 0.158 5.5, 8.8 1.01
LGXSM23 m 5.33 0.696   8 0.246 0.131 4.48, 6.27 -0.21
LGXSM31 f 4.48 0.234   5 0.105 0.0522 4.17, 4.7 -0.75
LGXSM31 m 3.65 1.76   6 0.717 0.48 0.51, 5.39 -1.26
LGXSM33 f 6.32 0.33   8 0.117 0.0522 5.92, 6.87 0.82
LGXSM33 m 7.35 1.14   7 0.433 0.156 6.11, 9.54 1.04
LGXSM35 f 4.91 0.853   7 0.323 0.174 3.08, 5.5 -0.39
LGXSM35 m 6.04 1.58   8 0.558 0.261 4.14, 8.51 0.23
LGXSM39 f 5.49 0.605   8 0.214 0.11 4.69, 6.43 0.11
LGXSM39 m 5.38 0.924   9 0.308 0.172 4.16, 6.9 -0.18
LGXSM4 f 5.05 0.618   8 0.219 0.122 3.95, 6.1 -0.27
LGXSM4 m 4.56 0.364   6 0.149 0.0799 4.05, 5.1 -0.69
LGXSM45 f 6.43 0.718   5 0.321 0.112 5.66, 7.38 0.91
LGXSM45 m 6.0 0.869   3 0.502 0.145 5.43, 7.0 0.2
LGXSM46 f 3.55 0.266   9 0.0887 0.075 3.19, 3.98 -1.54
LGXSM46 m 4.12 0.434   10 0.137 0.105 3.6, 5.06 -0.97
LGXSM48 f 5.69 0.924   7 0.349 0.162 4.55, 6.72 0.28
LGXSM48 m 7.62 0.815   8 0.288 0.107 6.61, 9.03 1.21
LGXSM5 f 4.39 0.176   8 0.0624 0.0402 4.17, 4.61 -0.83
LGXSM5 m 3.97 0.153   8 0.0542 0.0386 3.7, 4.15 -1.06
SM/J m 6.81 0.709   6 0.289 0.104 5.98, 7.79 0.7


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 f 5.7356 0.315 6.3563 5.1148
LGXSM10 m 5.136 0.2989 5.7249 4.5471
LGXSM15 f 4.4344 0.315 5.0552 3.8137
LGXSM15 m 3.9409 0.285 4.5024 3.3794
LGXSM18 f 4.5087 0.3341 5.1672 3.8503
LGXSM18 m 6.005 0.3341 6.6634 5.3466
LGXSM19 f 5.55 0.315 6.1708 4.9292
LGXSM19 m 4.9925 0.3341 5.6509 4.3341
LGXSM20 f 4.3575 0.3341 5.0159 3.6991
LGXSM20 m 5.595 0.3858 6.3553 4.8347
LGXSM22 f 8.3569 0.2621 8.8734 7.8404
LGXSM22 m 10.0492 0.2728 10.5868 9.5116
LGXSM23 f 6.5525 0.3341 7.2109 5.8941
LGXSM23 m 5.325 0.3341 5.9834 4.6666
LGXSM31 f 4.484 0.4227 5.3169 3.6511
LGXSM31 m 3.6533 0.3858 4.4136 2.893
LGXSM33 f 6.3212 0.3341 6.9797 5.6628
LGXSM33 m 7.3486 0.3572 8.0525 6.6447
LGXSM35 f 4.9143 0.3572 5.6182 4.2104
LGXSM35 m 6.0438 0.3341 6.7022 5.3853
LGXSM39 f 5.4937 0.3341 6.1522 4.8353
LGXSM39 m 5.3833 0.315 6.0041 4.7626
LGXSM4 f 5.0487 0.3341 5.7072 4.3903
LGXSM4 m 4.5633 0.3858 5.3236 3.803
LGXSM45 f 6.428 0.4227 7.2609 5.5951
LGXSM45 m 6.0 0.5456 7.0752 4.9248
LGXSM46 f 3.55 0.315 4.1708 2.9292
LGXSM46 m 4.121 0.2989 4.7099 3.5321
LGXSM48 f 5.69 0.3572 6.3939 4.9861
LGXSM48 m 7.6162 0.3341 8.2747 6.9578
LGXSM5 f 4.3925 0.3341 5.0509 3.7341
LGXSM5 m 3.9675 0.3341 4.6259 3.3091


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 both 5.4358 0.2171 5.8636 5.0079
LGXSM15 both 4.1877 0.2124 4.6062 3.7691
LGXSM18 both 5.2569 0.2363 5.7225 4.7913
LGXSM19 both 5.2713 0.2296 5.7237 4.8188
LGXSM20 both 4.9763 0.2552 5.4791 4.4734
LGXSM22 both 9.203 0.1892 9.5758 8.8303
LGXSM23 both 5.9388 0.2363 6.4043 5.4732
LGXSM31 both 4.0687 0.2861 4.6325 3.5048
LGXSM33 both 6.8349 0.2446 7.3168 6.353
LGXSM35 both 5.479 0.2446 5.9609 4.9971
LGXSM39 both 5.4385 0.2296 5.891 4.9861
LGXSM4 both 4.806 0.2552 5.3089 4.3032
LGXSM45 both 6.214 0.3451 6.894 5.534
LGXSM46 both 3.8355 0.2171 4.2633 3.4077
LGXSM48 both 6.6531 0.2446 7.135 6.1712
LGXSM5 both 4.18 0.2363 4.6456 3.7144




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA