Project measure / variable:   Seburn1   water

ID, description, units MPD:9237   water   water intake   [mL]  daily  
Data set, strains Seburn1   inbred   16 strains     sex: both     age: 7-9wks
Procedure intake monitoring
Ontology mappings

  STRAIN COMPARISON PLOT
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Seburn1 - water intake daily



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested15 strains16 strains
Mean of the strain means2.95   mL 3.10   mL
Median of the strain means2.81   mL 3.04   mL
SD of the strain means± 0.489 ± 0.461
Coefficient of variation (CV)0.166 0.149
Min–max range of strain means2.29   –   3.69   mL 2.33   –   4.13   mL
Mean sample size per strain7.2   mice 7.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.9134 0.9134 2.4645 0.1182
strain 14 39.1554 2.7968 7.5459 < 0.0001
sex:strain 14 7.7499 0.5536 1.4935 0.1169
Residuals 184 68.1976 0.3706


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 2.72 0.54   8 0.191 0.198 1.83, 3.4 -0.48
129S1/SvImJ m 3.04 0.283   8 0.1 0.0931 2.77, 3.48 -0.13
A/J f 2.29 0.497   8 0.176 0.217 1.16, 2.76 -1.36
A/J m 2.63 0.347   8 0.123 0.132 2.12, 3.07 -1.02
AKR/J f 3.38 0.836   7 0.316 0.247 1.83, 4.5 0.87
AKR/J m 4.13 0.952   8 0.337 0.23 2.7, 5.37 2.24
BALB/cJ f 2.56 0.207   6 0.0844 0.0807 2.3, 2.8 -0.8
BALB/cJ m 3.12 0.558   8 0.197 0.179 2.3, 4.13 0.04
BTBR T+ Itpr3tf/J f 3.47 0.801   7 0.303 0.231 2.77, 5.13 1.06
BTBR T+ Itpr3tf/J m 3.6 0.553   6 0.226 0.153 2.97, 4.33 1.09
C3H/HeJ f 3.58 0.692   7 0.262 0.193 2.7, 4.63 1.28
C3H/HeJ m 3.38 0.487   7 0.184 0.144 2.73, 4.2 0.61
C57BL/6J f 2.96 0.672   7 0.254 0.227 2.17, 3.83 0.01
C57BL/6J m 2.86 0.438   6 0.179 0.153 2.33, 3.4 -0.52
CAST/EiJ f 2.42 0.455   8 0.161 0.188 1.87, 3.1 -1.09
CAST/EiJ m 3.03 0.775   8 0.274 0.256 2.2, 4.33 -0.15
CBA/J f 2.68 0.285   8 0.101 0.106 2.3, 3.07 -0.56
CBA/J m 2.33 0.421   7 0.159 0.18 1.93, 3.13 -1.67
FVB/NJ f 2.81 1.0   4 0.5 0.356 2.2, 4.3 -0.29
FVB/NJ m 2.91 0.704   7 0.266 0.242 1.77, 3.83 -0.41
LP/J f 2.4 0.469   8 0.166 0.195 1.9, 3.0 -1.13
LP/J m 2.71 0.221   7 0.0836 0.0816 2.33, 3.07 -0.84
NOD/ShiLtJ f 3.69 0.979   8 0.346 0.265 2.7, 5.47 1.51
NOD/ShiLtJ m 3.68 0.499   7 0.188 0.135 2.9, 4.37 1.26
NZB/BlNJ f 2.52 0.383   7 0.145 0.152 1.97, 2.97 -0.88
NZB/BlNJ m 2.73 0.928   7 0.351 0.34 1.83, 4.53 -0.8
PL/J f 3.53 0.778   7 0.294 0.22 2.83, 4.63 1.18
PL/J m 2.83 0.271   7 0.103 0.0959 2.43, 3.17 -0.58
SJL/J m 3.53 0.905   7 0.342 0.257 2.47, 5.27 0.93
SWR/J f 3.28 0.676   6 0.276 0.206 2.27, 4.07 0.67
SWR/J m 3.08 0.416   7 0.157 0.135 2.53, 3.7 -0.04


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 2.72 0.2152 3.1447 2.2953
129S1/SvImJ m 3.0437 0.2152 3.4684 2.6191
A/J f 2.29 0.2152 2.7147 1.8653
A/J m 2.6312 0.2152 3.0559 2.2066
AKR/J f 3.3843 0.2301 3.8383 2.9303
AKR/J m 4.1337 0.2152 4.5584 3.7091
BALB/cJ f 2.5617 0.2485 3.052 2.0713
BALB/cJ m 3.1162 0.2152 3.5409 2.6916
BTBR T+ Itpr3tf/J f 3.4714 0.2301 3.9254 3.0174
BTBR T+ Itpr3tf/J m 3.605 0.2485 4.0954 3.1146
C3H/HeJ f 3.5814 0.2301 4.0354 3.1274
C3H/HeJ m 3.3843 0.2301 3.8383 2.9303
C57BL/6J f 2.9557 0.2301 3.4097 2.5017
C57BL/6J m 2.86 0.2485 3.3504 2.3696
CAST/EiJ f 2.4175 0.2152 2.8422 1.9928
CAST/EiJ m 3.0337 0.2152 3.4584 2.6091
CBA/J f 2.6837 0.2152 3.1084 2.2591
CBA/J m 2.3329 0.2301 2.7868 1.8789
FVB/NJ f 2.81 0.3044 3.4106 2.2094
FVB/NJ m 2.91 0.2301 3.364 2.456
LP/J f 2.4037 0.2152 2.8284 1.9791
LP/J m 2.7129 0.2301 3.1668 2.2589
NOD/ShiLtJ f 3.6925 0.2152 4.1172 3.2678
NOD/ShiLtJ m 3.6814 0.2301 4.1354 3.2274
NZB/BlNJ f 2.5157 0.2301 2.9697 2.0617
NZB/BlNJ m 2.7286 0.2301 3.1826 2.2746
PL/J f 3.5343 0.2301 3.9883 3.0803
PL/J m 2.8286 0.2301 3.2826 2.3746
SWR/J f 3.2783 0.2485 3.7687 2.788
SWR/J m 3.0757 0.2301 3.5297 2.6217


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 2.8819 0.1522 3.1822 2.5816
A/J both 2.4606 0.1522 2.7609 2.1603
AKR/J both 3.759 0.1575 4.0698 3.4482
BALB/cJ both 2.839 0.1644 3.1633 2.5146
BTBR T+ Itpr3tf/J both 3.5382 0.1694 3.8723 3.2041
C3H/HeJ both 3.4829 0.1627 3.8039 3.1618
C57BL/6J both 2.9079 0.1694 3.242 2.5737
CAST/EiJ both 2.7256 0.1522 3.0259 2.4253
CBA/J both 2.5083 0.1575 2.8191 2.1975
FVB/NJ both 2.86 0.1908 3.2364 2.4836
LP/J both 2.5583 0.1575 2.8691 2.2475
NOD/ShiLtJ both 3.687 0.1575 3.9978 3.3761
NZB/BlNJ both 2.6221 0.1627 2.9432 2.3011
PL/J both 3.1814 0.1627 3.5024 2.8604
SWR/J both 3.177 0.1694 3.5111 2.8429




  GWAS USING LINEAR MIXED MODELS