Project measure / variable:   JaxCC1   rears_3

ID, description, units MPD:89006   rears_3   number of rears, 20 min test   [n]  3rd 5min  
Data set, strains JaxCC1   CC   17 strains     sex: both     age: 7-9wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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JaxCC1 - number of rears, 20 min test 3rd 5min



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested17 strains17 strains
Mean of the strain means22.759   n 22.205   n
Median of the strain means23.4   n 21.0   n
SD of the strain means± 7.1592 ± 9.9993
Coefficient of variation (CV)0.3146 0.4503
Min–max range of strain means5.0   –   35.0   n 5.125   –   46.75   n
Mean sample size per strain7.0   mice 7.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 8.3231 8.3231 0.091 0.7632
strain 16 15180.2056 948.7628 10.3726 < 0.0001
sex:strain 16 3037.2915 189.8307 2.0754 0.0105
Residuals 209 19116.8464 91.4682


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC002/UncJ f 18.25 6.2735   8 2.218 0.3438 11.0, 28.0 -0.63
CC002/UncJ m 29.286 13.2   7 4.9891 0.4507 4.0, 41.0 0.71
CC003/UncJ f 23.4 6.5422   5 2.9257 0.2796 18.0, 34.0 0.09
CC003/UncJ m 21.0 11.106   4 5.5528 0.5288 7.0, 34.0 -0.12
CC004/TauUncJ f 30.625 6.823   8 2.4123 0.2228 18.0, 41.0 1.1
CC004/TauUncJ m 31.375 3.3354   8 1.1792 0.1063 27.0, 36.0 0.92
CC006/TauUncJ f 29.75 14.569   4 7.2844 0.4897 18.0, 51.0 0.98
CC006/TauUncJ m 22.625 10.141   8 3.5854 0.4482 8.0, 42.0 0.04
CC009/UncJ f 17.75 12.372   8 4.3742 0.697 5.0, 37.0 -0.7
CC009/UncJ m 22.5 9.7395   8 3.4434 0.4329 7.0, 40.0 0.03
CC013/GeniUncJ f 27.625 10.703   8 3.7841 0.3874 10.0, 42.0 0.68
CC013/GeniUncJ m 21.75 12.42   4 6.2099 0.571 13.0, 40.0 -0.05
CC017/UncJ f 16.0 9.654   6 3.9412 0.6034 8.0, 34.0 -0.94
CC017/UncJ m 12.8 7.4632   5 3.3377 0.5831 2.0, 19.0 -0.94
CC018/UncJ f 35.0 10.928   8 3.8638 0.3122 10.0, 44.0 1.71
CC018/UncJ m 46.75 5.6252   8 1.9888 0.1203 37.0, 53.0 2.45
CC019/TauUncJ f 24.625 9.6797   8 3.4223 0.3931 6.0, 34.0 0.26
CC019/TauUncJ m 16.429 6.7788   7 2.5622 0.4126 10.0, 27.0 -0.58
CC024/GeniUncJ f 17.571 8.162   7 3.085 0.4645 8.0, 28.0 -0.72
CC024/GeniUncJ m 18.5 10.704   8 3.7844 0.5786 4.0, 33.0 -0.37
CC025/GeniUncJ f 29.2 19.357   5 8.6568 0.6629 1.0, 48.0 0.9
CC025/GeniUncJ m 18.571 16.642   7 6.29 0.8961 1.0, 41.0 -0.36
CC026/GeniUncJ f 23.25 9.6177   8 3.4004 0.4137 4.0, 33.0 0.07
CC026/GeniUncJ m 36.5 9.3197   8 3.295 0.2553 23.0, 51.0 1.43
CC032/GeniUncJ f 20.125 6.2664   8 2.2155 0.3114 12.0, 28.0 -0.37
CC032/GeniUncJ m 17.25 4.9208   8 1.7398 0.2853 11.0, 24.0 -0.5
CC040/TauUncJ f 27.5 7.2111   8 2.5495 0.2622 13.0, 38.0 0.66
CC040/TauUncJ m 29.0 8.5021   8 3.0059 0.2932 15.0, 39.0 0.68
CC041/TauUncJ f 5.0 4.6904   7 1.7728 0.9381 1.0, 14.0 -2.48
CC041/TauUncJ m 5.125 4.4219   8 1.5634 0.8628 2.0, 15.0 -1.71
CC051/TauUncJ f 23.625 14.599   8 5.1615 0.6179 4.0, 51.0 0.12
CC051/TauUncJ m 16.4 9.5009   10 3.0044 0.5793 6.0, 39.0 -0.58
CC068/TauUncJ f 17.6 5.9414   5 2.6571 0.3376 13.0, 27.0 -0.72
CC068/TauUncJ m 11.625 4.9262   8 1.7417 0.4238 4.0, 20.0 -1.06


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ f 18.25 3.3813 24.9159 11.5841
CC002/UncJ m 29.2857 3.6148 36.4119 22.1595
CC003/UncJ f 23.4 4.2771 31.8318 14.9682
CC003/UncJ m 21.0 4.7819 30.427 11.573
CC004/TauUncJ f 30.625 3.3813 37.2909 23.9591
CC004/TauUncJ m 31.375 3.3813 38.0409 24.7091
CC006/TauUncJ f 29.75 4.7819 39.177 20.323
CC006/TauUncJ m 22.625 3.3813 29.2909 15.9591
CC009/UncJ f 17.75 3.3813 24.4159 11.0841
CC009/UncJ m 22.5 3.3813 29.1659 15.8341
CC013/GeniUncJ f 27.625 3.3813 34.2909 20.9591
CC013/GeniUncJ m 21.75 4.7819 31.177 12.323
CC017/UncJ f 16.0 3.9044 23.6971 8.3029
CC017/UncJ m 12.8 4.2771 21.2318 4.3682
CC018/UncJ f 35.0 3.3813 41.6659 28.3341
CC018/UncJ m 46.75 3.3813 53.4159 40.0841
CC019/TauUncJ f 24.625 3.3813 31.2909 17.9591
CC019/TauUncJ m 16.4286 3.6148 23.5547 9.3024
CC024/GeniUncJ f 17.5714 3.6148 24.6976 10.4453
CC024/GeniUncJ m 18.5 3.3813 25.1659 11.8341
CC025/GeniUncJ f 29.2 4.2771 37.6318 20.7682
CC025/GeniUncJ m 18.5714 3.6148 25.6976 11.4453
CC026/GeniUncJ f 23.25 3.3813 29.9159 16.5841
CC026/GeniUncJ m 36.5 3.3813 43.1659 29.8341
CC032/GeniUncJ f 20.125 3.3813 26.7909 13.4591
CC032/GeniUncJ m 17.25 3.3813 23.9159 10.5841
CC040/TauUncJ f 27.5 3.3813 34.1659 20.8341
CC040/TauUncJ m 29.0 3.3813 35.6659 22.3341
CC041/TauUncJ f 5.0 3.6148 12.1262 -2.1262
CC041/TauUncJ m 5.125 3.3813 11.7909 -1.5409
CC051/TauUncJ f 23.625 3.3813 30.2909 16.9591
CC051/TauUncJ m 16.4 3.0244 22.3622 10.4378
CC068/TauUncJ f 17.6 4.2771 26.0318 9.1682
CC068/TauUncJ m 11.625 3.3813 18.2909 4.9591


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ both 23.7679 2.4749 28.6468 18.8889
CC003/UncJ both 22.2 3.2078 28.5238 15.8762
CC004/TauUncJ both 31.0 2.391 35.7135 26.2865
CC006/TauUncJ both 26.1875 2.9283 31.9604 20.4146
CC009/UncJ both 20.125 2.391 24.8385 15.4115
CC013/GeniUncJ both 24.6875 2.9283 30.4604 18.9146
CC017/UncJ both 14.4 2.8956 20.1084 8.6916
CC018/UncJ both 40.875 2.391 45.5885 36.1615
CC019/TauUncJ both 20.5268 2.4749 25.4057 15.6478
CC024/GeniUncJ both 18.0357 2.4749 22.9147 13.1568
CC025/GeniUncJ both 23.8857 2.8 29.4056 18.3658
CC026/GeniUncJ both 29.875 2.391 34.5885 25.1615
CC032/GeniUncJ both 18.6875 2.391 23.401 13.974
CC040/TauUncJ both 28.25 2.391 32.9635 23.5365
CC041/TauUncJ both 5.0625 2.4749 9.9415 0.1835
CC051/TauUncJ both 20.0125 2.2683 24.4841 15.5409
CC068/TauUncJ both 14.6125 2.7261 19.9867 9.2383




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA