Project measure / variable:   Bolivar1   RR_time_pct_d3

ID, description, units MPD:63463   RR_time_pct_d3   percentage of time spent in right-rear of arena, 5 min test in dark   [%]  day 3  
Data set, strains Bolivar1   inbred   10 strains     sex: both     age:
Procedure open field test
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Bolivar1 - percentage of time spent in right-rear of arena, 5 min test in dark day 3



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means12.93   % 12.261   %
Median of the strain means12.282   % 11.929   %
SD of the strain means± 3.9225 ± 4.2381
Coefficient of variation (CV)0.3034 0.3457
Min–max range of strain means8.0167   –   22.103   % 6.7389   –   20.353   %
Mean sample size per strain12.0   mice 12.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 26.867 26.867 0.2634 0.6083
strain 9 1443.6777 160.4086 1.5727 0.1247
sex:strain 9 2157.8085 239.7565 2.3506 0.015
Residuals 220 22439.0873 101.9959


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 8.0167 4.9273   12 1.4224 0.6146 -1.25
129S1/SvImJ m 20.353 23.55   12 6.7982 1.1571 1.91
A/J f 22.103 13.496   12 3.896 0.6106 9.266666667, 54.5 2.34
A/J m 15.125 6.8792   12 1.9858 0.4548 5.733333333, 27.46666667 0.68
B6129SF1/J f 9.8167 15.626   12 4.5109 1.5918 0.9, 58.13333333 -0.79
B6129SF1/J m 14.894 17.081   12 4.9308 1.1468 0.966666667, 67.73333333 0.62
B6C3F1/J f 11.031 5.9894   12 1.729 0.543 5.733333333, 27.8 -0.48
B6C3F1/J m 12.514 6.1654   12 1.7798 0.4927 5.6, 24.83333333 0.06
BALB/cByJ f 14.017 15.779   12 4.5551 1.1257 4.333333333, 63.0 0.28
BALB/cByJ m 10.072 3.5352   12 1.0205 0.351 3.733333333, 14.63333333 -0.52
C3H/HeJ f 10.497 4.2433   12 1.2249 0.4042 4.633333333, 19.4 -0.62
C3H/HeJ m 15.353 8.2021   12 2.3678 0.5342 5.2, 34.2 0.73
C57BL/6J f 13.372 8.2983   12 2.3955 0.6206 5.833333333, 34.63333333 0.11
C57BL/6J m 8.7306 2.7525   12 0.79458 0.3153 4.533333333, 14.06666667 -0.83
CBA/J f 12.153 7.8515   12 2.2665 0.6461 -0.2
CBA/J m 7.4833 3.7201   12 1.0739 0.4971 3.166666667, 15.7 -1.13
DBA/2J f 12.411 4.9168   12 1.4193 0.3962 4.266666667, 22.76666667 -0.13
DBA/2J m 6.7389 5.0951   12 1.4708 0.7561 -1.3
FVB/NJ f 15.883 7.1934   12 2.0765 0.4529 4.4, 29.53333333 0.75
FVB/NJ m 11.344 4.6046   12 1.3292 0.4059 6.866666667, 21.66666667 -0.22


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 8.0167 2.9154 13.7624 2.2709
129S1/SvImJ m 20.3528 2.9154 26.0985 14.6071
A/J f 22.1028 2.9154 27.8485 16.3571
A/J m 15.125 2.9154 20.8707 9.3793
B6129SF1/J f 9.8167 2.9154 15.5624 4.0709
B6129SF1/J m 14.8944 2.9154 20.6402 9.1487
B6C3F1/J f 11.0306 2.9154 16.7763 5.2848
B6C3F1/J m 12.5139 2.9154 18.2596 6.7682
BALB/cByJ f 14.0167 2.9154 19.7624 8.2709
BALB/cByJ m 10.0722 2.9154 15.8179 4.3265
C3H/HeJ f 10.4972 2.9154 16.2429 4.7515
C3H/HeJ m 15.3528 2.9154 21.0985 9.6071
C57BL/6J f 13.3722 2.9154 19.1179 7.6265
C57BL/6J m 8.7306 2.9154 14.4763 2.9848
CBA/J f 12.1528 2.9154 17.8985 6.4071
CBA/J m 7.4833 2.9154 13.2291 1.7376
DBA/2J f 12.4111 2.9154 18.1568 6.6654
DBA/2J m 6.7389 2.9154 12.4846 0.9932
FVB/NJ f 15.8833 2.9154 21.6291 10.1376
FVB/NJ m 11.3444 2.9154 17.0902 5.5987


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 14.1847 2.0615 18.2476 10.1219
A/J both 18.6139 2.0615 22.6767 14.5511
B6129SF1/J both 12.3556 2.0615 16.4184 8.2927
B6C3F1/J both 11.7722 2.0615 15.8351 7.7094
BALB/cByJ both 12.0444 2.0615 16.1073 7.9816
C3H/HeJ both 12.925 2.0615 16.9878 8.8622
C57BL/6J both 11.0514 2.0615 15.1142 6.9886
CBA/J both 9.8181 2.0615 13.8809 5.7552
DBA/2J both 9.575 2.0615 13.6378 5.5122
FVB/NJ both 13.6139 2.0615 17.6767 9.5511




  GWAS USING LINEAR MIXED MODELS