Project measure / variable:   Crusio1   num_arms_d4

ID, description, units MPD:62024   num_arms_d4   number of different arms visited during first 8 arm choices of a trial   [n]  day 4  
Data set, strains Crusio1   BXD w/par   55 strains     sex: both     age: 10-13wks
Procedure radial maze
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  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
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Crusio1 - number of different arms visited during first 8 arm choices of a trial day 4



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested54 strains55 strains
Mean of the strain means5.8364   n 5.8872   n
Median of the strain means5.8666   n 6.0   n
SD of the strain means± 0.40966 ± 0.42145
Coefficient of variation (CV)0.0702 0.0716
Min–max range of strain means5.0   –   7.0   n 4.5   –   6.7   n
Mean sample size per strain8.3   mice 8.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1.5912 1.5912 1.9702 0.1608
strain 51 82.1493 1.6108 1.9944 0.0001
sex:strain 51 42.2185 0.8278 1.025 0.4282
Residuals 796 642.881 0.8076


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 f 6.5 0.70711   2   0.5 0.1088 6.0, 7.0 1.62
BXD1 m 5.5 0.70711   2   0.5 0.1286 5.0, 6.0 -0.92
BXD100 f 5.6 0.5164   10 0.1633 0.0922 5.0, 6.0 -0.58
BXD100 m 6.5 0.84984   10 0.26874 0.1307 5.0, 8.0 1.45
BXD101 f 5.8333 0.98319   6 0.40139 0.1685 4.0, 7.0 -0.01
BXD101 m 5.5 0.53452   8 0.18898 0.0972 5.0, 6.0 -0.92
BXD102 f 5.3 0.67495   10 0.21344 0.1273 5.0, 7.0 -1.31
BXD102 m 4.9 0.99443   10 0.31447 0.2029 3.0, 6.0 -2.34
BXD11 f 6.0 0.66667   10 0.21082 0.1111 5.0, 7.0 0.4
BXD11 m 5.8 1.2293   10 0.38873 0.2119 4.0, 8.0 -0.21
BXD13 f 5.9 1.1972   10 0.37859 0.2029 4.0, 8.0 0.16
BXD13 m 5.7 1.0593   10 0.335 0.1859 4.0, 7.0 -0.44
BXD14 f 5.9 0.8756   10 0.27689 0.1484 5.0, 7.0 0.16
BXD14 m 5.5 0.84984   10 0.26874 0.1545 4.0, 7.0 -0.92
BXD15 f 5.7 1.2517   10 0.39581 0.2196 4.0, 8.0 -0.33
BXD15 m 6.3 0.82327   10 0.26034 0.1307 5.0, 8.0 0.98
BXD16 f 5.3 1.2517   10 0.39581 0.2362 3.0, 7.0 -1.31
BXD16 m 6.0 0.8165   10 0.2582 0.1361 5.0, 7.0 0.27
BXD18 f 7.0 0.0   1   0.0 0.0 7.0, 7.0 2.84
BXD18 m 6.0 0.0   2   0.0 0.0 6.0, 6.0 0.27
BXD19 f 5.0 1.4142   2   1.0 0.2828 4.0, 6.0 -2.04
BXD19 m 6.5 0.70711   2   0.5 0.1088 6.0, 7.0 1.45
BXD2 f 5.6 0.69921   10 0.22111 0.1249 5.0, 7.0 -0.58
BXD2 m 5.7 0.48305   10 0.15275 0.0847 5.0, 6.0 -0.44
BXD21 f 5.1 0.56765   10 0.17951 0.1113 4.0, 6.0 -1.8
BXD21 m 4.5 1.5119   8 0.53452 0.336 2.0, 7.0 -3.29
BXD27 f 5.7 0.94868   10 0.3 0.1664 5.0, 7.0 -0.33
BXD27 m 5.8 0.78881   10 0.24944 0.136 5.0, 7.0 -0.21
BXD28 f 5.7 0.82327   10 0.26034 0.1444 4.0, 7.0 -0.33
BXD28 m 6.1 0.8756   10 0.27689 0.1435 5.0, 7.0 0.5
BXD31 f 6.0 0.8165   10 0.2582 0.1361 5.0, 7.0 0.4
BXD31 m 5.7 0.82327   10 0.26034 0.1444 4.0, 7.0 -0.44
BXD32 f 5.9 0.8756   10 0.27689 0.1484 5.0, 7.0 0.16
BXD32 m 6.2 0.78881   10 0.24944 0.1272 5.0, 7.0 0.74
BXD33 f 6.0 0.0   1   0.0 0.0 6.0, 6.0 0.4
BXD33 m 6.0 0.0   1   0.0 0.0 6.0, 6.0 0.27
BXD34 f 6.5 0.70711   2   0.5 0.1088 6.0, 7.0 1.62
BXD34 m 5.5 2.1213   2   1.5 0.3857 4.0, 7.0 -0.92
BXD39 f 5.7 1.2517   10 0.39581 0.2196 3.0, 7.0 -0.33
BXD39 m 5.9 0.73786   10 0.23333 0.1251 5.0, 7.0 0.03
BXD40 f 6.0 0.66667   10 0.21082 0.1111 5.0, 7.0 0.4
BXD40 m 5.7 1.1595   10 0.36667 0.2034 3.0, 7.0 -0.44
BXD42 f 5.6 1.7127   10 0.5416 0.3058 2.0, 8.0 -0.58
BXD42 m 5.5 1.1785   10 0.37268 0.2143 4.0, 7.0 -0.92
BXD43 f 5.8 0.91894   10 0.29059 0.1584 5.0, 8.0 -0.09
BXD43 m 6.2 1.0328   10 0.3266 0.1666 5.0, 8.0 0.74
BXD44 f 6.1 1.1972   10 0.37859 0.1963 4.0, 8.0 0.64
BXD44 m 6.7 0.82327   10 0.26034 0.1229 5.0, 8.0 1.93
BXD48 f 5.9 0.56765   10 0.17951 0.0962 5.0, 7.0 0.16
BXD48 m 6.4 0.5164   10 0.1633 0.0807 6.0, 7.0 1.22
BXD49 f 6.2 1.0328   10 0.3266 0.1666 4.0, 7.0 0.89
BXD49 m 6.2 1.1353   10 0.35901 0.1831 4.0, 7.0 0.74
BXD50 f 5.7 0.67495   10 0.21344 0.1184 5.0, 7.0 -0.33
BXD50 m 6.3 0.82327   10 0.26034 0.1307 5.0, 8.0 0.98
BXD51 f 5.7 0.82327   10 0.26034 0.1444 5.0, 7.0 -0.33
BXD51 m 6.2 0.78881   10 0.24944 0.1272 5.0, 7.0 0.74
BXD6 f 5.5 0.70711   10 0.22361 0.1286 4.0, 6.0 -0.82
BXD6 m 6.0 0.66667   10 0.21082 0.1111 5.0, 7.0 0.27
BXD61 f 6.1 0.73786   10 0.23333 0.121 5.0, 7.0 0.64
BXD61 m 6.0 0.94281   10 0.29814 0.1571 4.0, 7.0 0.27
BXD62 f 5.6 0.5164   10 0.1633 0.0922 5.0, 6.0 -0.58
BXD62 m 6.3 0.67495   10 0.21344 0.1071 5.0, 7.0 0.98
BXD65 f 6.3333 0.5164   6 0.21082 0.0815 6.0, 7.0 1.21
BXD65 m 5.9 0.73786   10 0.23333 0.1251 5.0, 7.0 0.03
BXD66 f 6.0 0.8165   4 0.40825 0.1361 5.0, 7.0 0.4
BXD66 m 6.0 1.4142   4 0.70711 0.2357 4.0, 7.0 0.27
BXD68 f 5.25 0.95743   4 0.47871 0.1824 4.0, 6.0 -1.43
BXD68 m 6.0 1.0954   6 0.44721 0.1826 4.0, 7.0 0.27
BXD69 f 6.1 0.99443   10 0.31447 0.163 4.0, 7.0 0.64
BXD69 m 5.9 0.8756   10 0.27689 0.1484 5.0, 7.0 0.03
BXD70 f 5.1 0.8756   10 0.27689 0.1717 4.0, 6.0 -1.8
BXD70 m 5.5 0.70711   10 0.22361 0.1286 4.0, 6.0 -0.92
BXD71 m 6.5 0.70711   2   0.5 0.1088 6.0, 7.0 1.45
BXD73 f 6.1 0.8756   10 0.27689 0.1435 5.0, 8.0 0.64
BXD73 m 5.6 0.69921   10 0.22111 0.1249 5.0, 7.0 -0.68
BXD75 f 6.1 0.56765   10 0.17951 0.0931 5.0, 7.0 0.64
BXD75 m 6.0 0.94281   10 0.29814 0.1571 5.0, 8.0 0.27
BXD77 f 5.0 0.8165   4 0.40825 0.1633 4.0, 6.0 -2.04
BXD77 m 6.0 0.8165   4 0.40825 0.1361 5.0, 7.0 0.27
BXD8 f 6.1 0.8756   10 0.27689 0.1435 5.0, 8.0 0.64
BXD8 m 6.3 0.67495   10 0.21344 0.1071 6.0, 8.0 0.98
BXD80 f 5.6 0.84327   10 0.26667 0.1506 4.0, 7.0 -0.58
BXD80 m 5.4 0.96609   10 0.30551 0.1789 4.0, 7.0 -1.16
BXD81 f 6.0 1.2472   10 0.39441 0.2079 4.0, 8.0 0.4
BXD81 m 5.6 0.84327   10 0.26667 0.1506 4.0, 7.0 -0.68
BXD84 f 6.6 0.5164   10 0.1633 0.0782 6.0, 7.0 1.86
BXD84 m 6.2 0.63246   10 0.2 0.102 5.0, 7.0 0.74
BXD85 f 5.75 0.5   4 0.25 0.087 5.0, 6.0 -0.21
BXD85 m 5.5 0.57735   4 0.28868 0.105 5.0, 6.0 -0.92
BXD86 f 5.8 0.91894   10 0.29059 0.1584 4.0, 7.0 -0.09
BXD86 m 5.9 0.73786   10 0.23333 0.1251 5.0, 7.0 0.03
BXD87 f 6.2 0.42164   10 0.13333 0.068 6.0, 7.0 0.89
BXD87 m 6.1 0.99443   10 0.31447 0.163 5.0, 8.0 0.5
BXD89 f 5.7 0.94868   10 0.3 0.1664 4.0, 7.0 -0.33
BXD89 m 5.9 0.8756   10 0.27689 0.1484 4.0, 7.0 0.03
BXD90 f 5.6667 1.0328   6 0.42164 0.1823 4.0, 7.0 -0.41
BXD90 m 6.1667 0.98319   6 0.40139 0.1594 5.0, 8.0 0.66
BXD92 f 6.5 0.70711   2   0.5 0.1088 6.0, 7.0 1.62
BXD92 m 5.0 1.0   3 0.57735 0.2 4.0, 6.0 -2.11
BXD96 f 6.1 0.56765   10 0.17951 0.0931 5.0, 7.0 0.64
BXD96 m 5.8 1.2293   10 0.38873 0.2119 4.0, 7.0 -0.21
BXD97 f 6.0 1.1547   10 0.36515 0.1925 4.0, 8.0 0.4
BXD97 m 6.0 1.0541   10 0.33333 0.1757 4.0, 7.0 0.27
BXD98 f 6.0 0.63246   6 0.2582 0.1054 5.0, 7.0 0.4
BXD98 m 6.4286 0.7868   7 0.29738 0.1224 5.0, 7.0 1.28
C57BL/6J f 5.3333 0.5164   6 0.21082 0.0968 5.0, 6.0 -1.23
C57BL/6J m 5.2 1.2293   10 0.38873 0.2364 3.0, 7.0 -1.63
DBA/2J f 5.4 0.84327   10 0.26667 0.1562 4.0, 7.0 -1.07
DBA/2J m 5.8 0.42164   10 0.13333 0.0727 5.0, 6.0 -0.21


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 f 6.5 0.6355 7.7474 5.2526
BXD1 m 5.5 0.6355 6.7474 4.2526
BXD100 f 5.6 0.2842 6.1579 5.0421
BXD100 m 6.5 0.2842 7.0579 5.9421
BXD101 f 5.8333 0.3669 6.5535 5.1132
BXD101 m 5.5 0.3177 6.1237 4.8763
BXD102 f 5.3 0.2842 5.8579 4.7421
BXD102 m 4.9 0.2842 5.4579 4.3421
BXD11 f 6.0 0.2842 6.5579 5.4421
BXD11 m 5.8 0.2842 6.3579 5.2421
BXD13 f 5.9 0.2842 6.4579 5.3421
BXD13 m 5.7 0.2842 6.2579 5.1421
BXD14 f 5.9 0.2842 6.4579 5.3421
BXD14 m 5.5 0.2842 6.0579 4.9421
BXD15 f 5.7 0.2842 6.2579 5.1421
BXD15 m 6.3 0.2842 6.8579 5.7421
BXD16 f 5.3 0.2842 5.8579 4.7421
BXD16 m 6.0 0.2842 6.5579 5.4421
BXD19 f 5.0 0.6355 6.2474 3.7526
BXD19 m 6.5 0.6355 7.7474 5.2526
BXD2 f 5.6 0.2842 6.1579 5.0421
BXD2 m 5.7 0.2842 6.2579 5.1421
BXD21 f 5.1 0.2842 5.6579 4.5421
BXD21 m 4.5 0.3177 5.1237 3.8763
BXD27 f 5.7 0.2842 6.2579 5.1421
BXD27 m 5.8 0.2842 6.3579 5.2421
BXD28 f 5.7 0.2842 6.2579 5.1421
BXD28 m 6.1 0.2842 6.6579 5.5421
BXD31 f 6.0 0.2842 6.5579 5.4421
BXD31 m 5.7 0.2842 6.2579 5.1421
BXD32 f 5.9 0.2842 6.4579 5.3421
BXD32 m 6.2 0.2842 6.7579 5.6421
BXD34 f 6.5 0.6355 7.7474 5.2526
BXD34 m 5.5 0.6355 6.7474 4.2526
BXD39 f 5.7 0.2842 6.2579 5.1421
BXD39 m 5.9 0.2842 6.4579 5.3421
BXD40 f 6.0 0.2842 6.5579 5.4421
BXD40 m 5.7 0.2842 6.2579 5.1421
BXD42 f 5.6 0.2842 6.1579 5.0421
BXD42 m 5.5 0.2842 6.0579 4.9421
BXD43 f 5.8 0.2842 6.3579 5.2421
BXD43 m 6.2 0.2842 6.7579 5.6421
BXD44 f 6.1 0.2842 6.6579 5.5421
BXD44 m 6.7 0.2842 7.2579 6.1421
BXD48 f 5.9 0.2842 6.4579 5.3421
BXD48 m 6.4 0.2842 6.9579 5.8421
BXD49 f 6.2 0.2842 6.7579 5.6421
BXD49 m 6.2 0.2842 6.7579 5.6421
BXD50 f 5.7 0.2842 6.2579 5.1421
BXD50 m 6.3 0.2842 6.8579 5.7421
BXD51 f 5.7 0.2842 6.2579 5.1421
BXD51 m 6.2 0.2842 6.7579 5.6421
BXD6 f 5.5 0.2842 6.0579 4.9421
BXD6 m 6.0 0.2842 6.5579 5.4421
BXD61 f 6.1 0.2842 6.6579 5.5421
BXD61 m 6.0 0.2842 6.5579 5.4421
BXD62 f 5.6 0.2842 6.1579 5.0421
BXD62 m 6.3 0.2842 6.8579 5.7421
BXD65 f 6.3333 0.3669 7.0535 5.6132
BXD65 m 5.9 0.2842 6.4579 5.3421
BXD66 f 6.0 0.4493 6.882 5.118
BXD66 m 6.0 0.4493 6.882 5.118
BXD68 f 5.25 0.4493 6.132 4.368
BXD68 m 6.0 0.3669 6.7202 5.2798
BXD69 f 6.1 0.2842 6.6579 5.5421
BXD69 m 5.9 0.2842 6.4579 5.3421
BXD70 f 5.1 0.2842 5.6579 4.5421
BXD70 m 5.5 0.2842 6.0579 4.9421
BXD73 f 6.1 0.2842 6.6579 5.5421
BXD73 m 5.6 0.2842 6.1579 5.0421
BXD75 f 6.1 0.2842 6.6579 5.5421
BXD75 m 6.0 0.2842 6.5579 5.4421
BXD77 f 5.0 0.4493 5.882 4.118
BXD77 m 6.0 0.4493 6.882 5.118
BXD8 f 6.1 0.2842 6.6579 5.5421
BXD8 m 6.3 0.2842 6.8579 5.7421
BXD80 f 5.6 0.2842 6.1579 5.0421
BXD80 m 5.4 0.2842 5.9579 4.8421
BXD81 f 6.0 0.2842 6.5579 5.4421
BXD81 m 5.6 0.2842 6.1579 5.0421
BXD84 f 6.6 0.2842 7.1579 6.0421
BXD84 m 6.2 0.2842 6.7579 5.6421
BXD85 f 5.75 0.4493 6.632 4.868
BXD85 m 5.5 0.4493 6.382 4.618
BXD86 f 5.8 0.2842 6.3579 5.2421
BXD86 m 5.9 0.2842 6.4579 5.3421
BXD87 f 6.2 0.2842 6.7579 5.6421
BXD87 m 6.1 0.2842 6.6579 5.5421
BXD89 f 5.7 0.2842 6.2579 5.1421
BXD89 m 5.9 0.2842 6.4579 5.3421
BXD90 f 5.6667 0.3669 6.3868 4.9465
BXD90 m 6.1667 0.3669 6.8868 5.4465
BXD92 f 6.5 0.6355 7.7474 5.2526
BXD92 m 5.0 0.5189 6.0185 3.9815
BXD96 f 6.1 0.2842 6.6579 5.5421
BXD96 m 5.8 0.2842 6.3579 5.2421
BXD97 f 6.0 0.2842 6.5579 5.4421
BXD97 m 6.0 0.2842 6.5579 5.4421
BXD98 f 6.0 0.3669 6.7202 5.2798
BXD98 m 6.4286 0.3397 7.0953 5.7618
C57BL/6J f 5.3333 0.3669 6.0535 4.6132
C57BL/6J m 5.2 0.2842 5.7579 4.6421
DBA/2J f 5.4 0.2842 5.9579 4.8421
DBA/2J m 5.8 0.2842 6.3579 5.2421


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BXD1 both 6.0 0.4493 6.882 5.118
BXD100 both 6.05 0.201 6.4445 5.6555
BXD101 both 5.6667 0.2427 6.143 5.1903
BXD102 both 5.1 0.201 5.4945 4.7055
BXD11 both 5.9 0.201 6.2945 5.5055
BXD13 both 5.8 0.201 6.1945 5.4055
BXD14 both 5.7 0.201 6.0945 5.3055
BXD15 both 6.0 0.201 6.3945 5.6055
BXD16 both 5.65 0.201 6.0445 5.2555
BXD19 both 5.75 0.4493 6.632 4.868
BXD2 both 5.65 0.201 6.0445 5.2555
BXD21 both 4.8 0.2131 5.2184 4.3816
BXD27 both 5.75 0.201 6.1445 5.3555
BXD28 both 5.9 0.201 6.2945 5.5055
BXD31 both 5.85 0.201 6.2445 5.4555
BXD32 both 6.05 0.201 6.4445 5.6555
BXD34 both 6.0 0.4493 6.882 5.118
BXD39 both 5.8 0.201 6.1945 5.4055
BXD40 both 5.85 0.201 6.2445 5.4555
BXD42 both 5.55 0.201 5.9445 5.1555
BXD43 both 6.0 0.201 6.3945 5.6055
BXD44 both 6.4 0.201 6.7945 6.0055
BXD48 both 6.15 0.201 6.5445 5.7555
BXD49 both 6.2 0.201 6.5945 5.8055
BXD50 both 6.0 0.201 6.3945 5.6055
BXD51 both 5.95 0.201 6.3445 5.5555
BXD6 both 5.75 0.201 6.1445 5.3555
BXD61 both 6.05 0.201 6.4445 5.6555
BXD62 both 5.95 0.201 6.3445 5.5555
BXD65 both 6.1167 0.232 6.5721 5.6612
BXD66 both 6.0 0.3177 6.6237 5.3763
BXD68 both 5.625 0.2901 6.1944 5.0556
BXD69 both 6.0 0.201 6.3945 5.6055
BXD70 both 5.3 0.201 5.6945 4.9055
BXD73 both 5.85 0.201 6.2445 5.4555
BXD75 both 6.05 0.201 6.4445 5.6555
BXD77 both 5.5 0.3177 6.1237 4.8763
BXD8 both 6.2 0.201 6.5945 5.8055
BXD80 both 5.5 0.201 5.8945 5.1055
BXD81 both 5.8 0.201 6.1945 5.4055
BXD84 both 6.4 0.201 6.7945 6.0055
BXD85 both 5.625 0.3177 6.2487 5.0013
BXD86 both 5.85 0.201 6.2445 5.4555
BXD87 both 6.15 0.201 6.5445 5.7555
BXD89 both 5.8 0.201 6.1945 5.4055
BXD90 both 5.9167 0.2594 6.4259 5.4074
BXD92 both 5.75 0.4102 6.5552 4.9448
BXD96 both 5.95 0.201 6.3445 5.5555
BXD97 both 6.0 0.201 6.3945 5.6055
BXD98 both 6.2143 0.25 6.705 5.7236
C57BL/6J both 5.2667 0.232 5.7221 4.8112
DBA/2J both 5.6 0.201 5.9945 5.2055




  GWAS USING LINEAR MIXED MODELS