Project measure / variable:   Kliethermes1   distance_MS

ID, description, units MPD:59901   distance_MS   distance traveled in a task to assess novelty seeking, 30 min test   [cm]  
Data set, strains Kliethermes1   inbred   14 strains     sex: both     age: 8wks
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  STRAIN COMPARISON PLOT
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Kliethermes1 - distance traveled in a task to assess novelty seeking, 30 min test



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested14 strains14 strains
Mean of the strain means6292   cm 6392   cm
Median of the strain means5817   cm 6572   cm
SD of the strain means± 2810 ± 2422
Coefficient of variation (CV)0.447 0.379
Min–max range of strain means1347   –   10921   cm 1600   –   9725   cm
Mean sample size per strain6.5   mice 6.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 686765.5074 686765.5074 0.4088 0.5235
strain 13 1090951183.9046 83919321.8388 49.9503 < 0.0001
sex:strain 13 33200748.642 2553903.7417 1.5201 0.1152
Residuals 160 268808800.6056 1680055.0038


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 2547.0 1315.0   6 537.0 0.516 491.0, 4112.0 -1.33
129S1/SvImJ m 4104.0 832.0   6 340.0 0.203 2972.0, 5196.0 -0.94
A/J f 1347.0 646.0   6 264.0 0.479 244.0, 2046.0 -1.76
A/J m 1600.0 689.0   6 281.0 0.431 573.0, 2317.0 -1.98
AKR/J f 6878.0 874.0   6 357.0 0.127 5847.0, 8436.0 0.21
AKR/J m 6376.0 559.0   6 228.0 0.0877 5292.0, 6934.0 -0.01
BALB/cByJ f 4971.0 2207.0   6 901.0 0.444 918.0, 6968.0 -0.47
BALB/cByJ m 6124.0 1194.0   6 487.0 0.195 4979.0, 8379.0 -0.11
BTBR T+ Itpr3tf/J f 7467.0 1425.0   6 582.0 0.191 5910.0, 9737.0 0.42
BTBR T+ Itpr3tf/J m 7602.0 2032.0   6 829.0 0.267 5617.0, 10973.0 0.5
C3H/HeJ f 4014.0 898.0   6 367.0 0.224 3044.0, 5503.0 -0.81
C3H/HeJ m 4087.0 628.0   6 256.0 0.154 3375.0, 5212.0 -0.95
C57BL/6J f 8449.0 1283.0   12 370.0 0.152 5958.0, 10053.0 0.77
C57BL/6J m 8094.0 1266.0   12 366.0 0.156 5913.0, 10220.0 0.7
C57L/J f 10120.0 2584.0   6 1055.0 0.255 7630.0, 13750.0 1.36
C57L/J m 9639.0 1798.0   6 734.0 0.187 7134.0, 12215.0 1.34
DBA/2J f 5275.0 1006.0   12 290.0 0.191 3205.0, 6786.0 -0.36
DBA/2J m 5972.0 688.0   9 229.0 0.115 4818.0, 7074.0 -0.17
FVB/NJ f 9611.0 952.0   6 389.0 0.0991 8064.0, 10751.0 1.18
FVB/NJ m 9111.0 887.0   6 362.0 0.0974 8495.0, 10871.0 1.12
NOD/ShiLtJ f 10921.0 2107.0   6 860.0 0.193 8062.0, 13379.0 1.65
NOD/ShiLtJ m 9725.0 1992.0   6 813.0 0.205 6789.0, 12381.0 1.38
NZB/BlNJ f 5492.0 943.0   6 385.0 0.172 3751.0, 6272.0 -0.28
NZB/BlNJ m 6767.0 862.0   6 352.0 0.127 5672.0, 8034.0 0.15
PERA/EiJ f 4856.0 978.0   6 399.0 0.201 3777.0, 6394.0 -0.51
PERA/EiJ m 3432.0 743.0   6 303.0 0.216 2377.0, 4292.0 -1.22
PL/J f 6142.0 879.0   6 359.0 0.143 5270.0, 7232.0 -0.05
PL/J m 6855.0 1441.0   5 644.0 0.21 5793.0, 9317.0 0.19


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 2547.0 529.1589 3592.0368 1501.9632
129S1/SvImJ m 4104.0 529.1589 5149.0368 3058.9632
A/J f 1347.1667 529.1589 2392.2035 302.1299
A/J m 1599.8333 529.1589 2644.8701 554.7965
AKR/J f 6877.5 529.1589 7922.5368 5832.4632
AKR/J m 6376.1667 529.1589 7421.2035 5331.1299
BALB/cByJ f 4970.8333 529.1589 6015.8701 3925.7965
BALB/cByJ m 6123.6667 529.1589 7168.7035 5078.6299
BTBR T+ Itpr3tf/J f 7467.1667 529.1589 8512.2035 6422.1299
BTBR T+ Itpr3tf/J m 7602.3333 529.1589 8647.3701 6557.2965
C3H/HeJ f 4014.1667 529.1589 5059.2035 2969.1299
C3H/HeJ m 4086.6667 529.1589 5131.7035 3041.6299
C57BL/6J f 8448.75 374.1719 9187.7026 7709.7974
C57BL/6J m 8094.25 374.1719 8833.2026 7355.2974
C57L/J f 10120.5 529.1589 11165.5368 9075.4632
C57L/J m 9639.0 529.1589 10684.0368 8593.9632
DBA/2J f 5275.25 374.1719 6014.2026 4536.2974
DBA/2J m 5972.4444 432.0565 6825.7134 5119.1755
FVB/NJ f 9610.8333 529.1589 10655.8701 8565.7965
FVB/NJ m 9111.3333 529.1589 10156.3701 8066.2965
NOD/ShiLtJ f 10921.1667 529.1589 11966.2035 9876.1299
NOD/ShiLtJ m 9724.6667 529.1589 10769.7035 8679.6299
NZB/BlNJ f 5491.6667 529.1589 6536.7035 4446.6299
NZB/BlNJ m 6767.0 529.1589 7812.0368 5721.9632
PERA/EiJ f 4855.8333 529.1589 5900.8701 3810.7965
PERA/EiJ m 3431.5 529.1589 4476.5368 2386.4632
PL/J f 6142.1667 529.1589 7187.2035 5097.1299
PL/J m 6854.8 579.6646 7999.5804 5710.0196


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 3325.5 374.1719 4064.4526 2586.5474
A/J both 1473.5 374.1719 2212.4526 734.5474
AKR/J both 6626.8333 374.1719 7365.7859 5887.8807
BALB/cByJ both 5547.25 374.1719 6286.2026 4808.2974
BTBR T+ Itpr3tf/J both 7534.75 374.1719 8273.7026 6795.7974
C3H/HeJ both 4050.4167 374.1719 4789.3693 3311.4641
C57BL/6J both 8271.5 264.5795 8794.0184 7748.9816
C57L/J both 9879.75 374.1719 10618.7026 9140.7974
DBA/2J both 5623.8472 285.7785 6188.2316 5059.4629
FVB/NJ both 9361.0833 374.1719 10100.0359 8622.1307
NOD/ShiLtJ both 10322.9167 374.1719 11061.8693 9583.9641
NZB/BlNJ both 6129.3333 374.1719 6868.2859 5390.3807
PERA/EiJ both 4143.6667 374.1719 4882.6193 3404.7141
PL/J both 6498.4833 392.4348 7273.5034 5723.4633




  GWAS USING LINEAR MIXED MODELS