Project measure / variable:   GMC03   body_pos

ID, description, units MPD:55213   body_pos   body position (0=inactive, 1=active, 2=excessively active)   [score]  
Data set, strains GMC03   inbred w/CC8   8 strains     sex: both     age: 8-10wks
Procedure observation (SHIRPA)
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

GMC03 - body position (0=inactive, 1=active, 2=excessively active)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means1.04   score 1.05   score
Median of the strain means1.00   score 1.00   score
SD of the strain means± 0.177 ± 0.109
Coefficient of variation (CV)0.171 0.104
Min–max range of strain means0.812   –   1.44   score 1.00   –   1.31   score
Mean sample size per strain17.5   mice 17.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0001 0.0001 0.0023 0.9615
strain 7 4.8505 0.6929 14.7655 < 0.0001
sex:strain 7 0.4263 0.0609 1.2977 0.2516
Residuals 260 12.2014 0.0469


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 1.0 0.0   16 0.0 0.0 1.0, 1.0 -0.22
129S1/SvImJ m 1.0 0.0   16 0.0 0.0 1.0, 1.0 -0.43
A/J f 0.812 0.403   16 0.101 0.496 -1.28
A/J m 1.0 0.0   16 0.0 0.0 1.0, 1.0 -0.43
C57BL/6J f 1.0 0.0   16 0.0 0.0 1.0, 1.0 -0.22
C57BL/6J m 1.0 0.0   16 0.0 0.0 1.0, 1.0 -0.43
CAST/EiJ f 1.0 0.0   19 0.0 0.0 1.0, 1.0 -0.22
CAST/EiJ m 1.0 0.0   17 0.0 0.0 1.0, 1.0 -0.43
NOD/ShiLtJ f 1.06 0.236   18 0.0556 0.223 1.0, 2.0 0.12
NOD/ShiLtJ m 1.06 0.25   16 0.0625 0.235 1.0, 2.0 0.13
NZO/HlLtJ f 1.0 0.0   17 0.0 0.0 1.0, 1.0 -0.22
NZO/HlLtJ m 1.0 0.0   17 0.0 0.0 1.0, 1.0 -0.43
PWK/PhJ f 1.0 0.0   20 0.0 0.0 1.0, 1.0 -0.22
PWK/PhJ m 1.0 0.0   22 0.0 0.0 1.0, 1.0 -0.43
WSB/EiJ f 1.44 0.511   18 0.121 0.354 1.0, 2.0 2.26
WSB/EiJ m 1.31 0.479   16 0.12 0.365 1.0, 2.0 2.43


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 1.0 0.0542 1.1066 0.8934
129S1/SvImJ m 1.0 0.0542 1.1066 0.8934
A/J f 0.8125 0.0542 0.9191 0.7059
A/J m 1.0 0.0542 1.1066 0.8934
C57BL/6J f 1.0 0.0542 1.1066 0.8934
C57BL/6J m 1.0 0.0542 1.1066 0.8934
CAST/EiJ f 1.0 0.0497 1.0979 0.9021
CAST/EiJ m 1.0 0.0525 1.1035 0.8965
NOD/ShiLtJ f 1.0556 0.0511 1.1561 0.955
NOD/ShiLtJ m 1.0625 0.0542 1.1691 0.9559
NZO/HlLtJ f 1.0 0.0525 1.1035 0.8965
NZO/HlLtJ m 1.0 0.0525 1.1035 0.8965
PWK/PhJ f 1.0 0.0484 1.0954 0.9046
PWK/PhJ m 1.0 0.0462 1.0909 0.9091
WSB/EiJ f 1.4444 0.0511 1.545 1.3439
WSB/EiJ m 1.3125 0.0542 1.4191 1.2059


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1.0 0.0383 1.0754 0.9246
A/J both 0.9063 0.0383 0.9817 0.8308
C57BL/6J both 1.0 0.0383 1.0754 0.9246
CAST/EiJ both 1.0 0.0362 1.0712 0.9288
NOD/ShiLtJ both 1.059 0.0372 1.1323 0.9857
NZO/HlLtJ both 1.0 0.0372 1.0732 0.9268
PWK/PhJ both 1.0 0.0335 1.0659 0.9341
WSB/EiJ both 1.3785 0.0372 1.4518 1.3052




  GWAS USING LINEAR MIXED MODELS