Project measure / variable:   Odet2   sperm_slow_60

ID, description, units MPD:53843   sperm_slow_60   percentage of motile sperm that are 'slow'   [%]  at 60 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet2 - percentage of motile sperm that are 'slow' at 60 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means45.8   %
Median of the strain means45.6   %
SD of the strain means± 11.7
Coefficient of variation (CV)0.256
Min–max range of strain means24.6   –   59.7   %
Mean sample size per strain12.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 12664.9981 1809.2854 17.2268 < 0.0001
Residuals 92 9662.507 105.0272


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 55.3 9.99   17 2.42 0.181 38.2, 69.9 0.81
A/J m 45.5 7.27   13 2.02 0.16 34.6, 57.3 -0.03
C57BL/6J m 57.5 12.2   11 3.69 0.213 39.3, 77.4 0.99
CAST/EiJ m 59.7 8.04   12 2.32 0.135 46.3, 75.7 1.18
NOD/ShiLtJ m 45.8 10.5   9 3.49 0.228 30.7, 58.0 0.0
NZO/HlLtJ m 37.5 7.39   10 2.34 0.197 18.8, 46.9 -0.71
PWK/PhJ m 40.8 14.6   14 3.89 0.357 11.5, 59.5 -0.43
WSB/EiJ m 24.6 9.21   14 2.46 0.374 12.8, 44.9 -1.81


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 55.3059 2.4856 60.2424 50.3693
A/J m 45.4923 2.8424 51.1375 39.8471
C57BL/6J m 57.4818 3.09 63.6188 51.3449
CAST/EiJ m 59.7167 2.9584 65.5924 53.841
NOD/ShiLtJ m 45.8111 3.4161 52.5958 39.0265
NZO/HlLtJ m 37.55 3.2408 43.9865 31.1135
PWK/PhJ m 40.7929 2.739 46.2327 35.353
WSB/EiJ m 24.6357 2.739 30.0755 19.1959




  GWAS USING LINEAR MIXED MODELS