Project measure / variable:   Gould2   FC_context_chr_12

ID, description, units MPD:47157   FC_context_chr_12   chronic group, conditioning: contextual fear   [%]  nicotine  
nicotine study
Data set, strains Gould2   inbred   8 strains     sex: m     age:
Procedure fear conditioning test
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  STRAIN COMPARISON PLOT
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Gould2 - chronic group, conditioning: contextual fear nicotine



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means33.8   %
Median of the strain means28.8   %
SD of the strain means± 14.8
Coefficient of variation (CV)0.438
Min–max range of strain means19.7   –   59.7   %
Mean sample size per strain9.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 15257.4033 2179.629 26.84 < 0.0001
Residuals 71 5765.7889 81.2083


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S6/SvEvTac m 59.7 11.3   10 3.56 0.189 40.0, 76.7 1.75
A/J m 52.7 9.54   10 3.02 0.181 36.7, 66.7 1.28
BALB/cByJ m 27.8 13.8   9 4.62 0.498 10.0, 46.7 -0.4
C3H/HeJ m 19.7 7.43   10 2.35 0.378 6.7, 33.3 -0.95
C57BL/6J m 35.0 8.36   10 2.64 0.239 23.3, 46.7 0.08
CBA/J m 29.7 6.56   10 2.07 0.221 20.0, 40.0 -0.28
DBA/1J m 20.7 7.17   10 2.27 0.347 10.0, 30.0 -0.89
DBA/2J m 25.0 5.71   10 1.81 0.228 16.7, 33.3 -0.59


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S6/SvEvTac m 59.67 2.8497 65.3522 53.9878
A/J m 52.66 2.8497 58.3422 46.9778
BALB/cByJ m 27.7889 3.0039 33.7784 21.7994
C3H/HeJ m 19.67 2.8497 25.3522 13.9878
C57BL/6J m 35.01 2.8497 40.6922 29.3278
CBA/J m 29.67 2.8497 35.3522 23.9878
DBA/1J m 20.66 2.8497 26.3422 14.9778
DBA/2J m 25.0 2.8497 30.6822 19.3178




  GWAS USING LINEAR MIXED MODELS