Project measure / variable:   Chesler2   distance10_OFT

ID, description, units MPD:43452   distance10_OFT   distance traveled, 10 min test   [cm]  
Data set, strains Chesler2   CC diallel w/par   50 strains     sex: both     age: 7-15wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Chesler2 - distance traveled, 10 min test



  8-WAY DIALLEL CROSS VIEW
Female animals
129S ♂ A ♂ B6 ♂ CAST ♂ NOD ♂ NZO ♂ PWK ♂ WSB ♂
129S ♀ 562 3021 3467 3884 3981 1738 3734 3835
A ♀ — — 4103 — — 1787 3642 —
B6 ♀ 2894 4232 — — 4854 2951 4313 —
CAST ♀ — 3792 4451 — — 2686 3248 3488
NOD ♀ 2693 3001 5964 4729 — 2715 5591 —
NZO ♀ 2774 2324 — — 1671 — — 3011
PWK ♀ 3207 2607 — — 5278 — — —
WSB ♀ 3554 4653 4264 — 4560 2756 4287 5774

Male animals
129S ♂ A ♂ B6 ♂ CAST ♂ NOD ♂ NZO ♂ PWK ♂ WSB ♂
129S ♀ — 2710 3661 2985 3578 1662 5989 2797
A ♀ — — 3053 3338 3190 — 3506 5138
B6 ♀ — 3326 — 5732 4860 2582 — —
CAST ♀ 3550 3417 4305 — 3519 2980 2853 7097
NOD ♀ 2075 3642 5027 4070 — 2918 — —
NZO ♀ 1756 — 2643 — 2568 — — —
PWK ♀ — 2625 4687 — 4420 — — —
WSB ♀ — 3659 3784 3952 4334 2154 — —

Cell coloring is based on strain mean Z-scores.     High-end         Mid         Low-end           Mouse over the cells to see additional info.


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested41 strains39 strains
Mean of the strain means3563   cm 3593   cm
Median of the strain means3554   cm 3506   cm
SD of the strain means± 1156 ± 1160
Coefficient of variation (CV)0.325 0.323
Min–max range of strain means562   –   5964   cm 1662   –   7097   cm
Mean sample size per strain2.1   mice 2.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1689151.6964 1689151.6964 3.338 0.0742
strain 10 33410923.5695 3341092.3569 6.6025 < 0.0001
sex:strain 10 2019263.8868 201926.3887 0.399 0.9403
Residuals 46 23277611.8223 506035.0396


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 562.0 0.0   1   0.0 0.0 562.0, 562.0 -2.6
129SAF1 f 3021.0 1502.0   2   1062.0 0.497 1959.0, 4083.0 -0.47
129SAF1 m 2710.0 712.0   3 411.0 0.263 2066.0, 3475.0 -0.76
129SB6F1 f 3467.0 654.0   3 377.0 0.189 3030.0, 4218.0 -0.08
129SB6F1 m 3661.0 598.0   4 299.0 0.163 2802.0, 4128.0 0.06
129SCASTF1 f 3884.0 1368.0   2   967.0 0.352 2916.0, 4851.0 0.28
129SCASTF1 m 2985.0 0.0   1   0.0 0.0 2985.0, 2985.0 -0.52
129SNODF1 f 3981.0 0.0   1   0.0 0.0 3981.0, 3981.0 0.36
129SNODF1 m 3578.0 64.8   2   45.8 0.0181 3532.0, 3624.0 -0.01
129SNZOF1 f 1738.0 0.0   1   0.0 0.0 1738.0, 1738.0 -1.58
129SNZOF1 m 1662.0 211.0   3 122.0 0.127 1442.0, 1863.0 -1.66
129SPWKF1 f 3734.0 709.0   4 354.0 0.19 2755.0, 4380.0 0.15
129SPWKF1 m 5989.0 0.0   1   0.0 0.0 5989.0, 5989.0 2.06
129SWSBF1 f 3835.0 179.0   4 89.3 0.0466 3627.0, 3986.0 0.24
129SWSBF1 m 2797.0 582.0   2   412.0 0.208 2386.0, 3209.0 -0.69
AB6F1 f 4103.0 0.0   1   0.0 0.0 4103.0, 4103.0 0.47
AB6F1 m 3053.0 768.0   3 443.0 0.252 2334.0, 3862.0 -0.47
ACASTF1 m 3338.0 0.0   1   0.0 0.0 3338.0, 3338.0 -0.22
ANODF1 m 3190.0 504.0   5 225.0 0.158 2394.0, 3706.0 -0.35
ANZOF1 f 1787.0 725.0   2   513.0 0.406 1274.0, 2300.0 -1.54
APWKF1 f 3642.0 0.0   1   0.0 0.0 3642.0, 3642.0 0.07
APWKF1 m 3506.0 0.0   1   0.0 0.0 3506.0, 3506.0 -0.08
AWSBF1 m 5138.0 0.0   1   0.0 0.0 5138.0, 5138.0 1.33
B6129SF1/J f 2894.0 485.0   2   343.0 0.167 2552.0, 3237.0 -0.58
B6AF1/J f 4232.0 0.0   1   0.0 0.0 4232.0, 4232.0 0.58
B6AF1/J m 3326.0 269.0   2   190.0 0.0809 3135.0, 3516.0 -0.23
B6CASTF1 m 5732.0 41.1   2   29.0 0.00716 5703.0, 5761.0 1.84
B6NODF1 f 4854.0 615.0   2   435.0 0.127 4419.0, 5288.0 1.12
B6NODF1 m 4860.0 2150.0   2   1520.0 0.442 3340.0, 6380.0 1.09
B6NZOF1 f 2951.0 240.0   4 120.0 0.0814 2718.0, 3285.0 -0.53
B6NZOF1 m 2582.0 385.0   2   272.0 0.149 2310.0, 2854.0 -0.87
B6PWKF1 f 4313.0 781.0   2   552.0 0.181 3760.0, 4865.0 0.65
CAST129SF1 m 3550.0 774.0   3 447.0 0.218 2661.0, 4070.0 -0.04
CASTAF1 f 3792.0 0.0   1   0.0 0.0 3792.0, 3792.0 0.2
CASTAF1 m 3417.0 520.0   2   368.0 0.152 3050.0, 3785.0 -0.15
CASTB6F1 f 4451.0 0.0   1   0.0 0.0 4451.0, 4451.0 0.77
CASTB6F1 m 4305.0 1079.0   3 623.0 0.251 3159.0, 5300.0 0.61
CASTNODF1 m 3519.0 714.0   3 412.0 0.203 2699.0, 3999.0 -0.06
CASTNZOF1 f 2686.0 526.0   3 303.0 0.196 2283.0, 3281.0 -0.76
CASTNZOF1 m 2980.0 0.0   1   0.0 0.0 2980.0, 2980.0 -0.53
CASTPWKF1 f 3248.0 461.0   5 206.0 0.142 2680.0, 3830.0 -0.27
CASTPWKF1 m 2853.0 555.0   6 227.0 0.195 2225.0, 3726.0 -0.64
CASTWSBF1 f 3488.0 490.0   2   347.0 0.141 3142.0, 3835.0 -0.06
CASTWSBF1 m 7097.0 0.0   1   0.0 0.0 7097.0, 7097.0 3.02
NOD129SF1 f 2693.0 0.0   1   0.0 0.0 2693.0, 2693.0 -0.75
NOD129SF1 m 2075.0 193.0   2   137.0 0.0931 1938.0, 2212.0 -1.31
NODAF1 f 3001.0 0.0   1   0.0 0.0 3001.0, 3001.0 -0.49
NODAF1 m 3642.0 0.0   1   0.0 0.0 3642.0, 3642.0 0.04
NODB6F1 f 5964.0 0.0   1   0.0 0.0 5964.0, 5964.0 2.08
NODB6F1 m 5027.0 416.0   2   294.0 0.0828 4732.0, 5321.0 1.24
NODCASTF1 f 4729.0 651.0   5 291.0 0.138 4137.0, 5513.0 1.01
NODCASTF1 m 4070.0 134.0   2   94.8 0.0329 3975.0, 4164.0 0.41
NODNZOF1 f 2715.0 853.0   2   603.0 0.314 2112.0, 3318.0 -0.73
NODNZOF1 m 2918.0 648.0   3 374.0 0.222 2270.0, 3566.0 -0.58
NODPWKF1 f 5591.0 0.0   1   0.0 0.0 5591.0, 5591.0 1.75
NZO129SF1 f 2774.0 330.0   2   234.0 0.119 2540.0, 3008.0 -0.68
NZO129SF1 m 1756.0 0.0   1   0.0 0.0 1756.0, 1756.0 -1.58
NZOAF1 f 2324.0 533.0   3 308.0 0.229 1890.0, 2919.0 -1.07
NZOB6F1 m 2643.0 0.0   1   0.0 0.0 2643.0, 2643.0 -0.82
NZONODF1 f 1671.0 0.0   1   0.0 0.0 1671.0, 1671.0 -1.64
NZONODF1 m 2568.0 266.0   2   188.0 0.104 2380.0, 2757.0 -0.88
NZOWSBF1 f 3011.0 1273.0   3 735.0 0.423 1611.0, 4099.0 -0.48
PWK129SF1 f 3207.0 1733.0   4 867.0 0.54 1926.0, 5658.0 -0.31
PWKAF1 f 2607.0 548.0   2   387.0 0.21 2220.0, 2994.0 -0.83
PWKAF1 m 2625.0 282.0   2   200.0 0.108 2425.0, 2825.0 -0.83
PWKB6F1 m 4687.0 813.0   2   575.0 0.173 4112.0, 5262.0 0.94
PWKNODF1 f 5278.0 0.0   1   0.0 0.0 5278.0, 5278.0 1.48
PWKNODF1 m 4420.0 304.0   2   215.0 0.0688 4205.0, 4635.0 0.71
WSB129SF1 f 3554.0 802.0   3 463.0 0.226 2767.0, 4371.0 -0.01
WSBAF1 f 4653.0 0.0   1   0.0 0.0 4653.0, 4653.0 0.94
WSBAF1 m 3659.0 206.0   2   146.0 0.0563 3513.0, 3804.0 0.06
WSBB6F1 f 4264.0 488.0   2   345.0 0.114 3919.0, 4609.0 0.61
WSBB6F1 m 3784.0 593.0   3 342.0 0.157 3183.0, 4369.0 0.16
WSBCASTF1 m 3952.0 868.0   4 434.0 0.22 3296.0, 5206.0 0.31
WSB/EiJ f 5774.0 1334.0   2   943.0 0.231 4831.0, 6718.0 1.91
WSBNODF1 f 4560.0 0.0   1   0.0 0.0 4560.0, 4560.0 0.86
WSBNODF1 m 4334.0 1274.0   2   901.0 0.294 3433.0, 5235.0 0.64
WSBNZOF1 f 2756.0 1018.0   6 415.0 0.369 1798.0, 4234.0 -0.7
WSBNZOF1 m 2154.0 388.0   2   274.0 0.18 1880.0, 2429.0 -1.24
WSBPWKF1 f 4287.0 3.58   2   2.53 0.000835 4285.0, 4290.0 0.63


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129SAF1 f 3021.2 503.0085 4033.7035 2008.6965
129SAF1 m 2709.5533 410.7047 3536.259 1882.8477
129SB6F1 f 3466.6267 410.7047 4293.3323 2639.921
129SB6F1 m 3661.2 355.6807 4377.1481 2945.2519
129SWSBF1 f 3834.66 355.6807 4550.6081 3118.7119
129SWSBF1 m 2797.45 503.0085 3809.9535 1784.9465
B6NODF1 f 4853.86 503.0085 5866.3635 3841.3565
B6NODF1 m 4860.025 503.0085 5872.5285 3847.5215
B6NZOF1 f 2951.3225 355.6807 3667.2706 2235.3744
B6NZOF1 m 2582.045 503.0085 3594.5485 1569.5415
CASTPWKF1 f 3248.284 318.1305 3888.6475 2607.9205
CASTPWKF1 m 2853.4133 290.4121 3437.9825 2268.8441
NODCASTF1 f 4728.666 318.1305 5369.0295 4088.3025
NODCASTF1 m 4069.545 503.0085 5082.0485 3057.0415
NODNZOF1 f 2715.12 503.0085 3727.6235 1702.6165
NODNZOF1 m 2917.6467 410.7047 3744.3523 2090.941
PWKAF1 f 2607.02 503.0085 3619.5235 1594.5165
PWKAF1 m 2625.045 503.0085 3637.5485 1612.5415
WSBB6F1 f 4263.815 503.0085 5276.3185 3251.3115
WSBB6F1 m 3784.21 410.7047 4610.9157 2957.5043
WSBNZOF1 f 2756.1 290.4121 3340.6692 2171.5308
WSBNZOF1 m 2154.42 503.0085 3166.9235 1141.9165


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129SAF1 both 2865.3767 324.6906 3518.9449 2211.8084
129SB6F1 both 3563.9133 271.6556 4110.7277 3017.0989
129SWSBF1 both 3316.055 308.0285 3936.0843 2696.0257
B6NODF1 both 4856.9425 355.6807 5572.8906 4140.9944
B6NZOF1 both 2766.6837 308.0285 3386.713 2146.6545
CASTPWKF1 both 3050.8487 215.3754 3484.3768 2617.3206
NODCASTF1 both 4399.1055 297.5838 4998.1107 3800.1003
NODNZOF1 both 2816.3833 324.6906 3469.9516 2162.8151
PWKAF1 both 2616.0325 355.6807 3331.9806 1900.0844
WSBB6F1 both 4024.0125 324.6906 4677.5807 3370.4443
WSBNZOF1 both 2455.26 290.4121 3039.8292 1870.6908




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA