Project measure / variable:   Donahue10   fecundity_index

ID, description, units MPD:41906   fecundity_index   mean litter size divided by mean litter interval   [n/wks]  
Data set, strains Donahue10   B6.A consomic   20 strains     sex: f     age: 3-53wks
Procedure colony observation
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  STRAIN COMPARISON PLOT
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Donahue10 - mean litter size divided by mean litter interval



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested20 strains
Mean of the strain means1.09   n/wks
Median of the strain means1.11   n/wks
SD of the strain means± 0.238
Coefficient of variation (CV)0.218
Min–max range of strain means0.516   –   1.64   n/wks
Mean sample size per strain7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 19 8.5287 0.4489 5.8209 < 0.0001
Residuals 138 10.6418 0.0771


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.A-Chr1 f 1.64 0.384   8 0.136 0.235 1.31, 2.48 2.31
B6.A-Chr10 f 1.06 0.275   8 0.0974 0.259 0.74, 1.51 -0.13
B6.A-Chr11 f 0.976 0.351   8 0.124 0.359 0.4, 1.52 -0.48
B6.A-Chr12 f 1.26 0.293   8 0.104 0.232 0.81, 1.7 0.71
B6.A-Chr13 f 0.516 0.0802   8 0.0283 0.155 0.42, 0.62 -2.41
B6.A-Chr14 f 1.11 0.223   8 0.0789 0.201 0.72, 1.36 0.08
B6.A-Chr15 f 1.33 0.262   8 0.0925 0.196 1.01, 1.67 1.01
B6.A-Chr16 f 0.998 0.167   8 0.059 0.167 0.7, 1.21 -0.39
B6.A-Chr17 f 1.34 0.357   7 0.135 0.267 0.82, 2.03 1.05
B6.A-Chr18 f 1.16 0.437   7 0.165 0.377 0.64, 1.96 0.29
B6.A-Chr19 f 1.14 0.231   8 0.0815 0.203 0.82, 1.51 0.21
B6.A-Chr2 f 0.799 0.168   8 0.0595 0.211 0.49, 1.04 -1.22
B6.A-Chr3 f 1.22 0.415   8 0.147 0.34 0.65, 1.8 0.54
B6.A-Chr4 f 1.05 0.232   8 0.082 0.22 0.63, 1.35 -0.17
B6.A-Chr5 f 1.15 0.23   8 0.0814 0.2 0.84, 1.49 0.25
B6.A-Chr6 f 1.27 0.235   8 0.083 0.185 0.8, 1.51 0.75
B6.A-Chr7 f 0.881 0.362   8 0.128 0.41 0.4, 1.38 -0.88
B6.A-Chr8 f 0.972 0.246   8 0.0871 0.253 0.71, 1.52 -0.5
B6.A-Chr9 f 1.11 0.127   8 0.045 0.115 0.91, 1.29 0.08
B6.A-ChrX f 0.829 0.198   8 0.0702 0.239 0.52, 1.1 -1.1


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.A-Chr1 f 1.6375 0.0982 1.8316 1.4434
B6.A-Chr10 f 1.0638 0.0982 1.2579 0.8696
B6.A-Chr11 f 0.9762 0.0982 1.1704 0.7821
B6.A-Chr12 f 1.2612 0.0982 1.4554 1.0671
B6.A-Chr13 f 0.5163 0.0982 0.7104 0.3221
B6.A-Chr14 f 1.1113 0.0982 1.3054 0.9171
B6.A-Chr15 f 1.335 0.0982 1.5291 1.1409
B6.A-Chr16 f 0.9975 0.0982 1.1916 0.8034
B6.A-Chr17 f 1.34 0.105 1.5475 1.1325
B6.A-Chr18 f 1.1571 0.105 1.3647 0.9496
B6.A-Chr19 f 1.1362 0.0982 1.3304 0.9421
B6.A-Chr2 f 0.7988 0.0982 0.9929 0.6046
B6.A-Chr3 f 1.2213 0.0982 1.4154 1.0271
B6.A-Chr4 f 1.0538 0.0982 1.2479 0.8596
B6.A-Chr5 f 1.15 0.0982 1.3441 0.9559
B6.A-Chr6 f 1.2675 0.0982 1.4616 1.0734
B6.A-Chr7 f 0.8813 0.0982 1.0754 0.6871
B6.A-Chr8 f 0.9725 0.0982 1.1666 0.7784
B6.A-Chr9 f 1.1075 0.0982 1.3016 0.9134
B6.A-ChrX f 0.8287 0.0982 1.0229 0.6346




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA