Project measure / variable:   Donahue6   pct_MONO

ID, description, units MPD:41503   pct_MONO   monocyte differential (percentage of viable WBC)   [%]  
Data set, strains Donahue6   B6.PWD consomic w/par   28 strains     sex: both     age: 7wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Donahue6 - monocyte differential (percentage of viable WBC)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains28 strains
Mean of the strain means5.35   % 7.09   %
Median of the strain means4.83   % 6.00   %
SD of the strain means± 2.87 ± 3.51
Coefficient of variation (CV)0.537 0.495
Min–max range of strain means1.46   –   14.0   % 1.31   –   16.8   %
Mean sample size per strain8.3   mice 8.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 309.7891 309.7891 49.3045 < 0.0001
strain 27 4103.7649 151.9913 24.1902 < 0.0001
sex:strain 27 629.7541 23.3242 3.7122 < 0.0001
Residuals 419 2632.6535 6.2832


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.PWD-Chr1 f 7.34 2.37   8 0.838 0.323 4.4, 11.5 0.69
B6.PWD-Chr1 m 10.1 2.59   8 0.917 0.257 7.47, 13.9 0.86
B6.PWD-Chr10.1 f 5.79 4.14   11 1.25 0.716 1.09, 13.6 0.15
B6.PWD-Chr10.1 m 4.82 2.44   8 0.863 0.506 1.56, 8.71 -0.65
B6.PWD-Chr10.2 f 4.91 1.42   8 0.502 0.289 2.81, 7.61 -0.15
B6.PWD-Chr10.2 m 6.17 0.899   8 0.318 0.146 5.06, 7.51 -0.26
B6.PWD-Chr10.3 f 3.13 1.8   8 0.635 0.574 0.928, 5.88 -0.77
B6.PWD-Chr10.3 m 4.16 1.29   8 0.457 0.311 1.24, 5.48 -0.83
B6.PWD-Chr11.1 f 4.84 1.3   12 0.376 0.269 2.38, 6.56 -0.18
B6.PWD-Chr11.1 m 5.99 2.0   12 0.577 0.334 2.62, 9.49 -0.31
B6.PWD-Chr11.2 f 2.76 1.52   9 0.506 0.551 0.469, 4.44 -0.9
B6.PWD-Chr11.2 m 6.27 4.32   10 1.37 0.688 1.69, 15.2 -0.23
B6.PWD-Chr11.3 f 1.74 1.45   8 0.513 0.834 0.639, 4.76 -1.26
B6.PWD-Chr11.3 m 1.31 0.276   10 0.0872 0.21 0.88, 1.73 -1.65
B6.PWD-Chr12 f 4.05 2.38   8 0.841 0.587 1.62, 7.35 -0.45
B6.PWD-Chr12 m 5.44 2.5   8 0.885 0.46 3.0, 9.23 -0.47
B6.PWD-Chr13 f 4.04 1.43   8 0.506 0.354 2.21, 6.11 -0.46
B6.PWD-Chr13 m 5.73 2.2   9 0.732 0.383 3.69, 10.9 -0.39
B6.PWD-Chr14 f 3.3 1.18   8 0.417 0.357 0.58, 4.38 -0.71
B6.PWD-Chr14 m 4.28 0.876   10 0.277 0.205 3.05, 6.17 -0.8
B6.PWD-Chr15 f 6.68 3.56   7 1.35 0.534 1.05, 10.7 0.46
B6.PWD-Chr15 m 5.51 2.83   8 1.0 0.514 1.75, 9.24 -0.45
B6.PWD-Chr16 f 6.07 2.93   8 1.04 0.483 2.6, 10.9 0.25
B6.PWD-Chr16 m 6.0 3.23   8 1.14 0.539 2.34, 12.2 -0.31
B6.PWD-Chr17 f 3.95 0.748   8 0.265 0.19 2.96, 5.45 -0.49
B6.PWD-Chr17 m 11.4 4.37   8 1.55 0.384 7.23, 18.2 1.23
B6.PWD-Chr18 f 4.54 1.18   8 0.418 0.261 2.54, 5.98 -0.28
B6.PWD-Chr18 m 4.86 1.37   8 0.484 0.282 2.79, 6.03 -0.64
B6.PWD-Chr19 f 4.55 1.68   8 0.594 0.369 2.07, 8.18 -0.28
B6.PWD-Chr19 m 5.83 0.814   7 0.308 0.14 4.53, 7.01 -0.36
B6.PWD-Chr2 f 5.42 1.22   10 0.386 0.226 3.66, 6.96 0.02
B6.PWD-Chr2 m 8.09 2.63   8 0.93 0.325 3.82, 12.4 0.28
B6.PWD-Chr3 f 8.71 4.24   8 1.5 0.487 5.1, 17.7 1.17
B6.PWD-Chr3 m 16.8 3.8   8 1.34 0.226 12.0, 24.5 2.77
B6.PWD-Chr5 f 4.24 1.36   8 0.481 0.321 2.48, 6.34 -0.39
B6.PWD-Chr5 m 5.15 2.01   8 0.712 0.391 1.04, 7.54 -0.55
B6.PWD-Chr6 f 14.0 3.39   8 1.2 0.241 7.63, 17.5 3.01
B6.PWD-Chr6 m 13.9 5.96   8 2.11 0.427 2.41, 22.7 1.94
B6.PWD-Chr8 f 4.85 0.581   5 0.26 0.12 4.05, 5.55 -0.17
B6.PWD-Chr8 m 7.36 3.33   5 1.49 0.452 4.64, 13.0 0.08
B6.PWD-Chr9 f 4.49 2.06   8 0.729 0.459 0.601, 6.51 -0.3
B6.PWD-Chr9 m 8.88 3.87   8 1.37 0.436 4.14, 16.6 0.51
B6.PWD-ChrX.1 f 4.83 3.9   8 1.38 0.808 0.718, 10.7 -0.18
B6.PWD-ChrX.1 m 5.16 3.68   7 1.39 0.713 2.32, 12.1 -0.55
B6.PWD-ChrX.2 f 5.04 1.22   8 0.431 0.242 4.07, 7.87 -0.11
B6.PWD-ChrX.2 m 10.7 2.46   9 0.822 0.231 8.3, 16.6 1.03
B6.PWD-ChrX.3 f 13.5 4.11   8 1.45 0.303 7.24, 17.7 2.84
B6.PWD-ChrX.3 m 11.5 2.56   8 0.903 0.222 7.51, 15.9 1.26
B6.PWD-ChrY f 6.87 2.51   8 0.889 0.366 4.35, 12.6 0.53
B6.PWD-ChrY m 9.36 2.01   8 0.71 0.214 6.73, 11.7 0.65
B6.PWD-mt f 5.99 0.826   7 0.312 0.138 5.15, 7.14 0.22
B6.PWD-mt m 8.53 1.68   8 0.595 0.197 6.79, 11.3 0.41
C57BL/6J f 2.67 1.21   16 0.302 0.453 0.89, 4.94 -0.93
C57BL/6J m 2.98 1.61   16 0.404 0.542 0.545, 5.47 -1.17
PWD/PhJ f 1.46 0.206   7 0.078 0.141 1.12, 1.7 -1.35
PWD/PhJ m 2.23 0.708   8 0.25 0.317 1.52, 3.57 -1.38


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 f 7.34 0.8862 9.082 5.598
B6.PWD-Chr1 m 10.1038 0.8862 11.8458 8.3617
B6.PWD-Chr10.1 f 5.7899 0.7558 7.2755 4.3043
B6.PWD-Chr10.1 m 4.8213 0.8862 6.5633 3.0792
B6.PWD-Chr10.2 f 4.9075 0.8862 6.6495 3.1655
B6.PWD-Chr10.2 m 6.165 0.8862 7.907 4.423
B6.PWD-Chr10.3 f 3.1298 0.8862 4.8718 1.3877
B6.PWD-Chr10.3 m 4.1566 0.8862 5.8986 2.4146
B6.PWD-Chr11.1 f 4.8375 0.7236 6.2598 3.4152
B6.PWD-Chr11.1 m 5.9878 0.7236 7.4102 4.5655
B6.PWD-Chr11.2 f 2.7562 0.8355 4.3986 1.1138
B6.PWD-Chr11.2 m 6.273 0.7927 7.8311 4.7149
B6.PWD-Chr11.3 f 1.7399 0.8862 3.4819 0.0
B6.PWD-Chr11.3 m 1.3113 0.7927 2.8694 0.0
B6.PWD-Chr12 f 4.052 0.8862 5.794 2.31
B6.PWD-Chr12 m 5.44 0.8862 7.182 3.698
B6.PWD-Chr13 f 4.0412 0.8862 5.7833 2.2992
B6.PWD-Chr13 m 5.7267 0.8355 7.369 4.0843
B6.PWD-Chr14 f 3.305 0.8862 5.047 1.563
B6.PWD-Chr14 m 4.278 0.7927 5.8361 2.7199
B6.PWD-Chr15 f 6.6786 0.9474 8.5409 4.8163
B6.PWD-Chr15 m 5.512 0.8862 7.254 3.77
B6.PWD-Chr16 f 6.0712 0.8862 7.8133 4.3292
B6.PWD-Chr16 m 5.9962 0.8862 7.7383 4.2542
B6.PWD-Chr17 f 3.9475 0.8862 5.6895 2.2055
B6.PWD-Chr17 m 11.375 0.8862 13.117 9.633
B6.PWD-Chr18 f 4.535 0.8862 6.277 2.793
B6.PWD-Chr18 m 4.8563 0.8862 6.5983 3.1142
B6.PWD-Chr19 f 4.5533 0.8862 6.2953 2.8112
B6.PWD-Chr19 m 5.8329 0.9474 7.6951 3.9706
B6.PWD-Chr2 f 5.416 0.7927 6.9741 3.8579
B6.PWD-Chr2 m 8.0925 0.8862 9.8345 6.3505
B6.PWD-Chr3 f 8.715 0.8862 10.457 6.973
B6.PWD-Chr3 m 16.8263 0.8862 18.5683 15.0842
B6.PWD-Chr5 f 4.2367 0.8862 5.9788 2.4947
B6.PWD-Chr5 m 5.1483 0.8862 6.8903 3.4062
B6.PWD-Chr6 f 14.0425 0.8862 15.7845 12.3005
B6.PWD-Chr6 m 13.945 0.8862 15.687 12.203
B6.PWD-Chr8 f 4.852 1.121 7.0555 2.6485
B6.PWD-Chr8 m 7.358 1.121 9.5615 5.1545
B6.PWD-Chr9 f 4.4901 0.8862 6.2321 2.7481
B6.PWD-Chr9 m 8.8837 0.8862 10.6258 7.1417
B6.PWD-ChrX.1 f 4.8265 0.8862 6.5685 3.0845
B6.PWD-ChrX.1 m 5.1557 0.9474 7.018 3.2934
B6.PWD-ChrX.2 f 5.035 0.8862 6.777 3.293
B6.PWD-ChrX.2 m 10.6878 0.8355 12.3302 9.0454
B6.PWD-ChrX.3 f 13.5425 0.8862 15.2845 11.8005
B6.PWD-ChrX.3 m 11.5338 0.8862 13.2758 9.7917
B6.PWD-ChrY f 6.8712 0.8862 8.6133 5.1292
B6.PWD-ChrY m 9.3562 0.8862 11.0983 7.6142
B6.PWD-mt f 5.9871 0.9474 7.8494 4.1249
B6.PWD-mt m 8.5275 0.8862 10.2695 6.7855
C57BL/6J f 2.6664 0.6267 3.8982 1.4346
C57BL/6J m 2.9797 0.6267 4.2115 1.7479
PWD/PhJ f 1.4586 0.9474 3.3209 0.0
PWD/PhJ m 2.2325 0.8862 3.9745 0.4905


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 both 8.7219 0.6267 9.9537 7.4901
B6.PWD-Chr10.1 both 5.3056 0.5824 6.4503 4.1609
B6.PWD-Chr10.2 both 5.5363 0.6267 6.768 4.3045
B6.PWD-Chr10.3 both 3.6432 0.6267 4.875 2.4114
B6.PWD-Chr11.1 both 5.4127 0.5117 6.4184 4.4069
B6.PWD-Chr11.2 both 4.5146 0.5759 5.6465 3.3827
B6.PWD-Chr11.3 both 1.5256 0.5945 2.6942 0.357
B6.PWD-Chr12 both 4.746 0.6267 5.9778 3.5142
B6.PWD-Chr13 both 4.884 0.609 6.081 3.6869
B6.PWD-Chr14 both 3.7915 0.5945 4.9601 2.6229
B6.PWD-Chr15 both 6.0953 0.6487 7.3703 4.8203
B6.PWD-Chr16 both 6.0337 0.6267 7.2655 4.802
B6.PWD-Chr17 both 7.6613 0.6267 8.893 6.4295
B6.PWD-Chr18 both 4.6956 0.6267 5.9274 3.4638
B6.PWD-Chr19 both 5.1931 0.6487 6.4681 3.918
B6.PWD-Chr2 both 6.7542 0.5945 7.9228 5.5857
B6.PWD-Chr3 both 12.7706 0.6267 14.0024 11.5388
B6.PWD-Chr5 both 4.6925 0.6267 5.9243 3.4607
B6.PWD-Chr6 both 13.9937 0.6267 15.2255 12.762
B6.PWD-Chr8 both 6.105 0.7927 7.6631 4.5469
B6.PWD-Chr9 both 6.6869 0.6267 7.9187 5.4552
B6.PWD-ChrX.1 both 4.9911 0.6487 6.2661 3.7161
B6.PWD-ChrX.2 both 7.8614 0.609 9.0585 6.6643
B6.PWD-ChrX.3 both 12.5381 0.6267 13.7699 11.3063
B6.PWD-ChrY both 8.1137 0.6267 9.3455 6.882
B6.PWD-mt both 7.2573 0.6487 8.5323 5.9823
C57BL/6J both 2.823 0.4431 3.694 1.952
PWD/PhJ both 1.8455 0.6487 3.1206 0.5705




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA