Project measure / variable:   Gupta2   pct_kidneyR

ID, description, units MPD:39206   pct_kidneyR   percent kidney weight to body weight   [%]  right  
Data set, strains Gupta2   BXH   10 strains     sex: both     age: postnatal d1
Procedure organ weights
Ontology mappings

  STRAIN COMPARISON PLOT
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Gupta2 - percent kidney weight to body weight right



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means0.480   % 0.482   %
Median of the strain means0.493   % 0.473   %
SD of the strain means± 0.0361 ± 0.0471
Coefficient of variation (CV)0.0753 0.0977
Min–max range of strain means0.415   –   0.531   % 0.424   –   0.561   %
Mean sample size per strain12.9   mice 14.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0015 0.0015 0.2474 0.6193
strain 9 0.3324 0.0369 5.9467 < 0.0001
sex:strain 9 0.0524 0.0058 0.9368 0.4936
Residuals 254 1.5775 0.0062


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXH10/TyJ f 0.518 0.0543   13 0.0151 0.105 0.408, 0.614 1.05
BXH10/TyJ m 0.539 0.0419   14 0.0112 0.0778 0.478, 0.614 1.21
BXH11/TyJ f 0.495 0.0574   7 0.0217 0.116 0.382, 0.555 0.41
BXH11/TyJ m 0.561 0.037   6 0.0151 0.0659 0.524, 0.613 1.68
BXH14/TyJ f 0.415 0.127   15 0.0327 0.305 -1.8
BXH14/TyJ m 0.462 0.032   16 0.008 0.0693 0.393, 0.521 -0.42
BXH19/TyJ f 0.456 0.0625   23 0.013 0.137 0.299, 0.579 -0.67
BXH19/TyJ m 0.427 0.0393   11 0.0118 0.0921 0.355, 0.486 -1.17
BXH2/TyJ f 0.497 0.0492   8 0.0174 0.0989 0.433, 0.558 0.47
BXH2/TyJ m 0.495 0.0504   12 0.0146 0.102 0.416, 0.572 0.28
BXH4/TyJ f 0.531 0.0972   15 0.0251 0.183 0.453, 0.804 1.41
BXH4/TyJ m 0.523 0.0838   11 0.0253 0.16 0.432, 0.729 0.87
BXH6/TyJ f 0.491 0.0596   15 0.0154 0.121 0.375, 0.589 0.3
BXH6/TyJ m 0.473 0.147   15 0.0379 0.311 -0.19
BXH7/TyJ f 0.437 0.0565   9 0.0188 0.129 0.369, 0.528 -1.19
BXH7/TyJ m 0.424 0.0821   16 0.0205 0.193 0.311, 0.537 -1.23
BXH8/TyJ f 0.466 0.0704   10 0.0223 0.151 0.354, 0.558 -0.39
BXH8/TyJ m 0.441 0.119   19 0.0274 0.271 -0.87
BXH9/TyJ f 0.495 0.0605   18 0.0143 0.122 0.401, 0.593 0.41
BXH9/TyJ m 0.474 0.0556   21 0.0121 0.117 0.343, 0.591 -0.17


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXH10/TyJ f 0.5184 0.0219 0.5614 0.4753
BXH10/TyJ m 0.5386 0.0211 0.5801 0.4972
BXH11/TyJ f 0.4946 0.0298 0.5532 0.4359
BXH11/TyJ m 0.5607 0.0322 0.624 0.4973
BXH14/TyJ f 0.4152 0.0203 0.4553 0.3751
BXH14/TyJ m 0.4621 0.0197 0.5009 0.4233
BXH19/TyJ f 0.4563 0.0164 0.4887 0.4239
BXH19/TyJ m 0.4265 0.0238 0.4733 0.3798
BXH2/TyJ f 0.4973 0.0279 0.5521 0.4424
BXH2/TyJ m 0.4948 0.0227 0.5396 0.45
BXH4/TyJ f 0.5311 0.0203 0.5712 0.4911
BXH4/TyJ m 0.5235 0.0238 0.5702 0.4767
BXH6/TyJ f 0.4915 0.0203 0.5315 0.4514
BXH6/TyJ m 0.4727 0.0203 0.5127 0.4326
BXH7/TyJ f 0.437 0.0263 0.4887 0.3853
BXH7/TyJ m 0.4245 0.0197 0.4633 0.3857
BXH8/TyJ f 0.4659 0.0249 0.515 0.4168
BXH8/TyJ m 0.4414 0.0181 0.477 0.4058
BXH9/TyJ f 0.4949 0.0186 0.5315 0.4584
BXH9/TyJ m 0.4739 0.0172 0.5078 0.44


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BXH10/TyJ both 0.5285 0.0152 0.5584 0.4986
BXH11/TyJ both 0.5276 0.0219 0.5708 0.4844
BXH14/TyJ both 0.4387 0.0142 0.4666 0.4108
BXH19/TyJ both 0.4414 0.0144 0.4699 0.413
BXH2/TyJ both 0.496 0.018 0.5315 0.4606
BXH4/TyJ both 0.5273 0.0156 0.5581 0.4965
BXH6/TyJ both 0.4821 0.0144 0.5104 0.4537
BXH7/TyJ both 0.4308 0.0164 0.4631 0.3984
BXH8/TyJ both 0.4537 0.0154 0.484 0.4233
BXH9/TyJ both 0.4844 0.0127 0.5094 0.4595




  GWAS USING LINEAR MIXED MODELS