Project measure / variable:   Schalkwyk1   laten_explore_OFTobj

ID, description, units MPD:34506   laten_explore_OFTobj   latency to explore novel object, 5 min test   [s]  
Data set, strains Schalkwyk1   inbred   8 strains     sex: m     age: 9-11wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Schalkwyk1 - latency to explore novel object, 5 min test



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means121   s
Median of the strain means114   s
SD of the strain means± 49.9
Coefficient of variation (CV)0.411
Min–max range of strain means50.1   –   180   s
Mean sample size per strain10.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 190566.11 27223.73 13.5939 < 0.0001
Residuals 78 156206.3222 2002.6452


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 116.0 77.4   11 23.4 0.668 13.4, 180.0 -0.11
A/J m 180.0 0.0   11 0.0 0.0 180.0, 180.0 1.18
BALB/cByJ m 168.0 40.6   11 12.2 0.242 45.4, 180.0 0.94
C3H/HeJ m 112.0 59.8   9 19.9 0.536 6.8, 180.0 -0.19
C57BL/6J m 50.1 18.3   11 5.51 0.365 24.5, 77.9 -1.43
DBA/2J m 63.6 44.4   11 13.4 0.698 8.72, 144.0 -1.16
FVB/NJ m 105.0 52.1   11 15.7 0.495 31.5, 180.0 -0.33
SJL/J m 176.0 9.51   11 2.87 0.0541 156.0, 180.0 1.1


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 115.9182 13.4929 142.7805 89.0559
A/J m 180.0 13.4929 206.8623 153.1377
BALB/cByJ m 167.7636 13.4929 194.626 140.9013
C3H/HeJ m 111.6444 14.917 141.3419 81.947
C57BL/6J m 50.1273 13.4929 76.9896 23.265
DBA/2J m 63.5745 13.4929 90.4369 36.7122
FVB/NJ m 105.3455 13.4929 132.2078 78.4831
SJL/J m 175.7273 13.4929 202.5896 148.865




  GWAS USING LINEAR MIXED MODELS