Project measure / variable:   Korstanje1   CREA_M18

ID, description, units MPD:29712   CREA_M18   creatinine (urine CREA)   [mg/dL]  at age 18mo  
Data set, strains Korstanje1   inbred   30 strains     sex: both     age: 78wks
Procedure urinalysis
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  STRAIN COMPARISON PLOT
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Korstanje1 - creatinine (urine CREA) at age 18mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested30 strains29 strains
Mean of the strain means80.9   mg/dL 85.8   mg/dL
Median of the strain means81.5   mg/dL 85.2   mg/dL
SD of the strain means± 24.3 ± 23.9
Coefficient of variation (CV)0.301 0.279
Min–max range of strain means33.6   –   120   mg/dL 46.0   –   141   mg/dL
Mean sample size per strain7.4   mice 7.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 2442.3849 2442.3849 4.711 0.0306
strain 28 186452.9509 6659.034 12.8442 < 0.0001
sex:strain 28 51865.0255 1852.3223 3.5728 < 0.0001
Residuals 363 188196.2224 518.4469


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 95.9 20.0   6 8.15 0.208 63.6, 112.0 0.62
129S1/SvImJ m 93.5 20.2   8 7.15 0.216 62.5, 119.0 0.32
A/J f 119.0 25.2   6 10.3 0.212 79.6, 152.0 1.57
A/J m 104.0 25.1   7 9.49 0.241 73.5, 137.0 0.76
BALB/cByJ f 89.4 21.1   8 7.44 0.235 68.3, 130.0 0.35
BALB/cByJ m 112.0 13.7   6 5.61 0.123 99.0, 136.0 1.09
BTBR T+ Itpr3tf/J f 60.3 13.9   6 5.67 0.23 40.8, 79.0 -0.84
BTBR T+ Itpr3tf/J m 89.9 13.3   7 5.02 0.148 74.1, 108.0 0.17
BUB/BnJ f 51.0 20.5   12 5.93 0.402 32.2, 89.6 -1.23
BUB/BnJ m 95.8 27.8   6 11.3 0.29 53.1, 138.0 0.42
C3H/HeJ f 111.0 16.8   6 6.88 0.152 96.3, 139.0 1.24
C3H/HeJ m 111.0 20.2   6 8.23 0.181 89.2, 141.0 1.05
C57BL/10J f 94.5 21.0   6 8.56 0.222 60.2, 119.0 0.56
C57BL/10J m 111.0 23.9   8 8.46 0.215 75.9, 148.0 1.05
C57BL/6J f 59.2 11.3   7 4.28 0.191 44.0, 77.4 -0.89
C57BL/6J m 89.2 17.5   8 6.17 0.196 62.6, 110.0 0.14
C57BLKS/J f 89.1 26.0   12 7.5 0.292 49.2, 141.0 0.34
C57BLKS/J m 85.0 24.4   8 8.61 0.287 30.9, 111.0 -0.04
C57BR/cdJ f 72.5 23.8   7 8.98 0.328 39.2, 111.0 -0.34
C57BR/cdJ m 57.1 9.34   7 3.53 0.164 43.7, 70.7 -1.2
C57L/J f 66.1 19.7   8 6.98 0.299 34.7, 87.8 -0.61
C57L/J m 78.5 23.0   6 9.4 0.293 54.0, 110.0 -0.31
CAST/EiJ f 93.7 30.5   5 13.6 0.325 59.5, 128.0 0.53
CBA/J f 120.0 29.2   8 10.3 0.243 51.7, 148.0 1.61
CBA/J m 112.0 19.3   6 7.9 0.173 82.0, 139.0 1.09
DBA/2J f 73.9 22.0   7 8.3 0.297 44.7, 106.0 -0.29
DBA/2J m 79.5 34.5   10 10.9 0.434 39.7, 129.0 -0.26
FVB/NJ f 96.3 41.9   7 15.8 0.435 41.2, 162.0 0.63
FVB/NJ m 141.0 42.0   6 17.1 0.297 62.1, 175.0 2.3
KK/HlJ f 70.3 22.6   8 7.99 0.321 42.9, 100.0 -0.43
KK/HlJ m 85.2 21.7   7 8.2 0.254 38.6, 102.0 -0.03
LP/J f 95.5 18.1   6 7.4 0.19 73.3, 120.0 0.6
LP/J m 94.8 23.6   8 8.35 0.249 60.2, 128.0 0.37
MRL/MpJ f 33.6 13.4   7 5.07 0.399 17.1, 56.0 -1.94
MRL/MpJ m 46.0 19.1   6 7.79 0.415 21.8, 65.4 -1.66
NOD.B10Sn-H2b/J f 105.0 15.4   10 4.88 0.147 80.3, 125.0 0.99
NOD.B10Sn-H2b/J m 83.7 13.8   6 5.62 0.165 71.3, 107.0 -0.09
NON/ShiLtJ f 93.3 36.1   8 12.8 0.387 26.4, 133.0 0.51
NON/ShiLtJ m 116.0 33.2   8 11.8 0.287 61.2, 171.0 1.26
NZO/HlLtJ f 40.3 21.7   7 8.2 0.538 18.1, 75.0 -1.67
NZO/HlLtJ m 56.0 15.2   7 5.74 0.271 37.4, 72.4 -1.25
NZW/LacJ f 65.1 10.6   6 4.31 0.162 56.5, 85.2 -0.65
NZW/LacJ m 81.2 29.1   8 10.3 0.359 41.9, 133.0 -0.19
P/J f 66.0 24.2   6 9.89 0.367 38.9, 99.8 -0.61
P/J m 55.7 12.2   8 4.32 0.219 35.5, 69.5 -1.26
PL/J f 69.9 27.3   6 11.2 0.391 39.5, 118.0 -0.45
PL/J m 95.0 37.3   6 15.2 0.393 44.4, 143.0 0.38
PWD/PhJ f 68.3 28.4   7 10.7 0.416 18.2, 102.0 -0.52
PWD/PhJ m 71.3 26.6   6 10.8 0.372 52.3, 119.0 -0.61
RIIIS/J f 111.0 20.8   7 7.87 0.187 86.7, 142.0 1.24
RIIIS/J m 115.0 23.5   8 8.32 0.204 67.1, 144.0 1.22
SJL/J f 68.6 13.1   7 4.93 0.19 45.8, 89.6 -0.5
SJL/J m 60.4 23.6   4 11.8 0.39 39.2, 91.1 -1.06
SM/J f 95.3 15.5   8 5.49 0.163 72.0, 118.0 0.59
SM/J m 51.9 4.55   8 1.61 0.0876 43.5, 58.6 -1.42
SWR/J f 35.9 27.1   7 10.2 0.753 9.38, 91.0 -1.85
SWR/J m 51.0 11.7   7 4.43 0.23 35.2, 66.0 -1.46
WSB/EiJ f 116.0 7.98   12 2.3 0.0689 103.0, 127.0 1.44
WSB/EiJ m 66.7 19.1   7 7.2 0.286 39.1, 87.0 -0.8


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 95.85 9.2956 114.13 77.57
129S1/SvImJ m 93.55 8.0502 109.3809 77.7191
A/J f 118.9333 9.2956 137.2133 100.6534
A/J m 104.3571 8.606 121.2811 87.4332
BALB/cByJ f 89.4375 8.0502 105.2684 73.6066
BALB/cByJ m 111.5833 9.2956 129.8633 93.3034
BTBR T+ Itpr3tf/J f 60.3 9.2956 78.58 42.02
BTBR T+ Itpr3tf/J m 89.8571 8.606 106.7811 72.9332
BUB/BnJ f 51.0083 6.573 63.9342 38.0825
BUB/BnJ m 95.8 9.2956 114.08 77.52
C3H/HeJ f 110.7667 9.2956 129.0466 92.4867
C3H/HeJ m 111.45 9.2956 129.73 93.17
C57BL/10J f 94.4667 9.2956 112.7466 76.1867
C57BL/10J m 111.45 8.0502 127.2809 95.6191
C57BL/6J f 59.1857 8.606 76.1097 42.2618
C57BL/6J m 89.25 8.0502 105.0809 73.4191
C57BLKS/J f 89.0583 6.573 101.9842 76.1325
C57BLKS/J m 84.9625 8.0502 100.7934 69.1316
C57BR/cdJ f 72.4571 8.606 89.3811 55.5332
C57BR/cdJ m 57.0571 8.606 73.9811 40.1332
C57L/J f 66.0625 8.0502 81.8934 50.2316
C57L/J m 78.5333 9.2956 96.8133 60.2534
CBA/J f 119.9625 8.0502 135.7934 104.1316
CBA/J m 111.6667 9.2956 129.9466 93.3867
DBA/2J f 73.8571 8.606 90.7811 56.9332
DBA/2J m 79.47 7.2003 93.6296 65.3104
FVB/NJ f 96.2571 8.606 113.1811 79.3332
FVB/NJ m 141.35 9.2956 159.63 123.07
KK/HlJ f 70.35 8.0502 86.1809 54.5191
KK/HlJ m 85.2429 8.606 102.1668 68.3189
LP/J f 95.4667 9.2956 113.7466 77.1867
LP/J m 94.8 8.0502 110.6309 78.9691
MRL/MpJ f 33.6286 8.606 50.5525 16.7046
MRL/MpJ m 45.9667 9.2956 64.2466 27.6867
NOD.B10Sn-H2b/J f 105.15 7.2003 119.3096 90.9904
NOD.B10Sn-H2b/J m 83.7167 9.2956 101.9966 65.4367
NON/ShiLtJ f 93.2625 8.0502 109.0934 77.4316
NON/ShiLtJ m 115.7375 8.0502 131.5684 99.9066
NZO/HlLtJ f 40.3143 8.606 57.2382 23.3903
NZO/HlLtJ m 56.0143 8.606 72.9382 39.0903
NZW/LacJ f 65.1 9.2956 83.38 46.82
NZW/LacJ m 81.225 8.0502 97.0559 65.3941
P/J f 65.9833 9.2956 84.2633 47.7034
P/J m 55.7125 8.0502 71.5434 39.8816
PL/J f 69.9 9.2956 88.18 51.62
PL/J m 95.0167 9.2956 113.2966 76.7367
PWD/PhJ f 68.2714 8.606 85.1954 51.3475
PWD/PhJ m 71.2833 9.2956 89.5633 53.0034
RIIIS/J f 111.2571 8.606 128.1811 94.3332
RIIIS/J m 115.2625 8.0502 131.0934 99.4316
SJL/J f 68.5714 8.606 85.4954 51.6475
SJL/J m 60.45 11.3847 82.8383 38.0617
SM/J f 95.35 8.0502 111.1809 79.5191
SM/J m 51.9375 8.0502 67.7684 36.1066
SWR/J f 35.9257 8.606 52.8497 19.0018
SWR/J m 51.0143 8.606 67.9382 34.0903
WSB/EiJ f 115.75 6.573 128.6759 102.8241
WSB/EiJ m 66.7286 8.606 83.6525 49.8046


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 94.7 6.1484 106.7911 82.6089
A/J both 111.6452 6.3339 124.1009 99.1896
BALB/cByJ both 100.5104 6.1484 112.6015 88.4194
BTBR T+ Itpr3tf/J both 75.0786 6.3339 87.5343 62.6229
BUB/BnJ both 73.4042 5.6924 84.5983 62.21
C3H/HeJ both 111.1083 6.573 124.0342 98.1825
C57BL/10J both 102.9583 6.1484 115.0494 90.8673
C57BL/6J both 74.2179 5.8921 85.8049 62.6308
C57BLKS/J both 87.0104 5.1964 97.2292 76.7916
C57BR/cdJ both 64.7571 6.0854 76.7242 52.7901
C57L/J both 72.2979 6.1484 84.389 60.2069
CBA/J both 115.8146 6.1484 127.9056 103.7235
DBA/2J both 76.6636 5.6104 87.6966 65.6305
FVB/NJ both 118.8036 6.3339 131.2593 106.3479
KK/HlJ both 77.7964 5.8921 89.3835 66.2094
LP/J both 95.1333 6.1484 107.2244 83.0423
MRL/MpJ both 39.7976 6.3339 52.2533 27.3419
NOD.B10Sn-H2b/J both 94.4333 5.879 105.9946 82.8721
NON/ShiLtJ both 104.5 5.6924 115.6941 93.3059
NZO/HlLtJ both 48.1643 6.0854 60.1313 36.1972
NZW/LacJ both 73.1625 6.1484 85.2536 61.0714
P/J both 60.8479 6.1484 72.939 48.7569
PL/J both 82.4583 6.573 95.3842 69.5325
PWD/PhJ both 69.7774 6.3339 82.2331 57.3217
RIIIS/J both 113.2598 5.8921 124.8469 101.6728
SJL/J both 64.5107 7.1357 78.5433 50.4781
SM/J both 73.6438 5.6924 84.8379 62.4496
SWR/J both 43.47 6.0854 55.437 31.503
WSB/EiJ both 91.2393 5.4145 101.887 80.5915




  GWAS USING LINEAR MIXED MODELS