Project measure / variable:   Eumorphia2   BMC_52wk

ID, description, units MPD:25925   BMC_52wk   bone mineral content (BMC)   [g]  at age 52wks  
Data set, strains Eumorphia2   inbred   4 strains     sex: both
Procedure DXA
Ontology mappings

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  STRAIN COMPARISON PLOT
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Eumorphia2 - bone mineral content (BMC) at age 52wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested4 strains3 strains
Mean of the strain means0.522   g 0.486   g
Median of the strain means0.522   g 0.449   g
SD of the strain means± 0.0853 ± 0.111
Coefficient of variation (CV)0.163 0.229
Min–max range of strain means0.428   –   0.614   g 0.398   –   0.611   g
Mean sample size per strain8.5   mice 6.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0 0.0 0.0033 0.9542
strain 2 0.2622 0.1311 88.734 < 0.0001
sex:strain 2 0.0124 0.0062 4.1938 0.0222
Residuals 40 0.0591 0.0015


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S2/SvPas f 0.57 0.0425   9 0.0142 0.0746 0.517, 0.65 0.57
129S2/SvPas m 0.611 0.0684   7 0.0259 0.112 0.508, 0.731 1.12
BALB/cJ f 0.475 0.0299   9 0.00997 0.063 0.419, 0.523 -0.55
BALB/cJ m 0.449 0.0197   3 0.0114 0.0439 0.433, 0.471 -0.33
C3HeB/FeJ f 0.614 0.0273   6 0.0111 0.0445 0.592, 0.66 1.08
C57BL/6J f 0.428 0.0252   10 0.00798 0.059 0.387, 0.463 -1.1
C57BL/6J m 0.398 0.0204   8 0.00723 0.0514 0.373, 0.425 -0.79


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S2/SvPas f 0.5697 0.0128 0.5956 0.5438
129S2/SvPas m 0.6114 0.0145 0.6408 0.5821
BALB/cJ f 0.4752 0.0128 0.5011 0.4493
BALB/cJ m 0.449 0.0222 0.4938 0.4042
C57BL/6J f 0.4277 0.0122 0.4523 0.4031
C57BL/6J m 0.3975 0.0136 0.425 0.37


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S2/SvPas both 0.5905 0.0097 0.6101 0.571
BALB/cJ both 0.4621 0.0128 0.488 0.4362
C57BL/6J both 0.4126 0.0091 0.431 0.3942




GWAS analysis not available: SNP data is not available for enough strains (at least 4)