Project measure / variable:   Ackert1   BMI_M20

ID, description, units MPD:25033   BMI_M20   body mass index (BMI)   [kg/m2]  at age 20mo  
Data set, strains Ackert1   inbred   28 strains     sex: both     age: 87wks
Procedure body size and weight
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  STRAIN COMPARISON PLOT
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Ackert1 - body mass index (BMI) at age 20mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains26 strains
Mean of the strain means2.71   kg/m2 2.86   kg/m2
Median of the strain means2.62   kg/m2 2.83   kg/m2
SD of the strain means± 0.385 ± 0.593
Coefficient of variation (CV)0.142 0.207
Min–max range of strain means2.19   –   3.81   kg/m2 1.91   –   5.12   kg/m2
Mean sample size per strain6.9   mice 6.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1.7057 1.7057 14.9172 0.0001
strain 27 56.3498 2.087 18.2522 < 0.0001
sex:strain 27 11.1137 0.4116 3.5998 < 0.0001
Residuals 306 34.9893 0.1143


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 2.98 0.426   8 0.15 0.143 2.69, 3.9 0.71
129S1/SvImJ m 2.83 0.334   7 0.126 0.118 2.34, 3.25 -0.06
A/J f 2.24 0.294   3 0.17 0.131 2.0, 2.57 -1.21
A/J m 1.91 0.131   4 0.0657 0.0688 1.77, 2.06 -1.61
BALB/cByJ f 2.85 0.308   5 0.138 0.108 2.39, 3.13 0.37
BALB/cByJ m 2.17 0.22   7 0.0831 0.101 1.9, 2.54 -1.17
BTBR T+ Itpr3tf/J f 2.77 0.238   6 0.0971 0.086 2.59, 3.18 0.17
BTBR T+ Itpr3tf/J m 2.72 0.197   3 0.114 0.0725 2.59, 2.95 -0.24
BUB/BnJ f 2.5 0.389   8 0.137 0.155 1.83, 3.05 -0.54
C3H/HeJ f 2.38 0.196   6 0.08 0.0824 2.06, 2.59 -0.85
C3H/HeJ m 2.82 0.214   8 0.0757 0.076 2.51, 3.12 -0.08
C57BL/10J f 2.6 0.113   8 0.0401 0.0435 2.41, 2.78 -0.28
C57BL/10J m 2.89 0.21   6 0.0859 0.0728 2.62, 3.25 0.04
C57BL/6J f 2.51 0.0711   7 0.0269 0.0284 2.39, 2.59 -0.51
C57BL/6J m 3.22 0.31   7 0.117 0.0962 2.81, 3.61 0.6
C57BLKS/J f 2.76 0.1   7 0.038 0.0363 2.61, 2.9 0.14
C57BLKS/J m 2.78 0.28   7 0.106 0.101 2.35, 3.1 -0.14
C57BR/cdJ f 2.66 0.211   8 0.0746 0.0794 2.42, 3.02 -0.12
C57BR/cdJ m 2.98 0.224   8 0.0791 0.0752 2.56, 3.33 0.19
C57L/J f 2.81 0.321   8 0.113 0.114 2.34, 3.39 0.27
C57L/J m 2.95 0.296   7 0.112 0.1 2.57, 3.44 0.14
CBA/J f 3.34 0.537   8 0.19 0.16 2.68, 4.13 1.65
CBA/J m 2.93 0.22   8 0.0779 0.0752 2.55, 3.28 0.11
DBA/2J f 2.73 0.384   7 0.145 0.14 2.08, 3.23 0.06
DBA/2J m 2.32 0.332   6 0.136 0.143 2.01, 2.87 -0.92
FVB/NJ f 2.7 0.351   6 0.143 0.13 2.23, 3.09 -0.02
FVB/NJ m 2.9 0.243   5 0.109 0.0838 2.56, 3.19 0.06
KK/HlJ f 2.59 0.481   6 0.196 0.186 1.83, 3.2 -0.3
KK/HlJ m 2.64 0.375   7 0.142 0.142 2.2, 3.33 -0.38
LP/J f 2.64 0.161   7 0.061 0.0612 2.39, 2.91 -0.17
LP/J m 2.82 0.185   8 0.0655 0.0656 2.63, 3.21 -0.08
MRL/MpJ f 2.19 0.2   4 0.1 0.0915 1.9, 2.36 -1.34
MRL/MpJ m 2.22 0.475   4 0.237 0.214 1.79, 2.74 -1.09
NOD.B10Sn-H2b/J f 2.48 0.171   8 0.0605 0.0691 2.28, 2.79 -0.59
NOD.B10Sn-H2b/J m 3.01 0.183   5 0.0817 0.0606 2.72, 3.16 0.24
NON/ShiLtJ f 2.98 0.421   9 0.14 0.141 2.49, 3.87 0.71
NON/ShiLtJ m 3.28 0.808   8 0.286 0.246 2.22, 4.74 0.7
NZO/HlLtJ f 3.81 1.06   5 0.474 0.278 1.96, 4.51 2.87
NZO/HlLtJ m 5.12 0.315   4 0.157 0.0615 4.76, 5.47 3.81
NZW/LacJ f 3.68 0.405   8 0.143 0.11 2.96, 4.11 2.53
NZW/LacJ m 3.71 0.298   7 0.113 0.0804 3.37, 4.3 1.43
P/J f 2.44 0.221   8 0.0783 0.0908 2.14, 2.71 -0.69
P/J m 2.8 0.17   6 0.0693 0.0606 2.56, 3.05 -0.11
PL/J f 2.38 0.193   5 0.0862 0.0811 2.24, 2.71 -0.85
PWD/PhJ f 2.32 0.216   8 0.0765 0.0931 1.94, 2.58 -1.0
PWD/PhJ m 2.32 0.194   7 0.0734 0.0838 2.03, 2.54 -0.92
RIIIS/J f 2.87 0.457   8 0.162 0.159 1.98, 3.32 0.42
RIIIS/J m 2.83 0.481   8 0.17 0.17 2.22, 3.55 -0.06
SM/J f 2.6 0.15   8 0.053 0.0576 2.41, 2.79 -0.28
SM/J m 2.93 0.314   7 0.119 0.107 2.47, 3.44 0.11
SWR/J f 2.61 0.193   4 0.0964 0.0738 2.42, 2.84 -0.25
SWR/J m 2.89 0.164   7 0.0619 0.0567 2.72, 3.17 0.04
WSB/EiJ f 2.36 0.227   8 0.0803 0.0964 2.06, 2.82 -0.9
WSB/EiJ m 2.5 0.251   6 0.102 0.1 2.11, 2.75 -0.62


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 2.9763 0.1196 3.2115 2.741
129S1/SvImJ m 2.8271 0.1278 3.0786 2.5756
A/J f 2.2433 0.1952 2.6275 1.8592
A/J m 1.9125 0.1691 2.2452 1.5798
BALB/cByJ f 2.848 0.1512 3.1456 2.5504
BALB/cByJ m 2.1671 0.1278 2.4186 1.9156
BTBR T+ Itpr3tf/J f 2.765 0.138 3.0366 2.4934
BTBR T+ Itpr3tf/J m 2.7233 0.1952 3.1075 2.3392
BUB/BnJ f 2.505 0.1196 2.7403 2.2697
BUB/BnJ m 2.71 0.2391 3.1805 2.2395
C3H/HeJ f 2.3767 0.138 2.6483 2.105
C3H/HeJ m 2.8163 0.1196 3.0515 2.581
C57BL/10J f 2.605 0.1196 2.8403 2.3697
C57BL/10J m 2.8917 0.138 3.1633 2.62
C57BL/6J f 2.5071 0.1278 2.7586 2.2556
C57BL/6J m 3.2243 0.1278 3.4758 2.9728
C57BLKS/J f 2.7643 0.1278 3.0158 2.5128
C57BLKS/J m 2.78 0.1278 3.0315 2.5285
C57BR/cdJ f 2.6575 0.1196 2.8928 2.4222
C57BR/cdJ m 2.975 0.1196 3.2103 2.7397
C57L/J f 2.8075 0.1196 3.0428 2.5722
C57L/J m 2.9486 0.1278 3.2001 2.6971
CBA/J f 3.345 0.1196 3.5803 3.1097
CBA/J m 2.9325 0.1196 3.1678 2.6972
DBA/2J f 2.7314 0.1278 2.9829 2.4799
DBA/2J m 2.3183 0.138 2.59 2.0467
FVB/NJ f 2.6983 0.138 2.97 2.4267
FVB/NJ m 2.9 0.1512 3.1976 2.6024
KK/HlJ f 2.5933 0.138 2.865 2.3217
KK/HlJ m 2.6414 0.1278 2.8929 2.3899
LP/J f 2.6371 0.1278 2.8886 2.3856
LP/J m 2.8213 0.1196 3.0565 2.586
MRL/MpJ f 2.1875 0.1691 2.5202 1.8548
MRL/MpJ m 2.2225 0.1691 2.5552 1.8898
NOD.B10Sn-H2b/J f 2.4763 0.1196 2.7115 2.241
NOD.B10Sn-H2b/J m 3.012 0.1512 3.3096 2.7144
NON/ShiLtJ f 2.9789 0.1127 3.2007 2.7571
NON/ShiLtJ m 3.2838 0.1196 3.519 3.0485
NZO/HlLtJ f 3.808 0.1512 4.1056 3.5104
NZO/HlLtJ m 5.1225 0.1691 5.4552 4.7898
NZW/LacJ f 3.6775 0.1196 3.9128 3.4422
NZW/LacJ m 3.7071 0.1278 3.9586 3.4556
P/J f 2.4375 0.1196 2.6728 2.2022
P/J m 2.7983 0.138 3.07 2.5267
PL/J f 2.378 0.1512 2.6756 2.0804
PL/J m 2.8 0.2391 3.2705 2.3295
PWD/PhJ f 2.3238 0.1196 2.559 2.0885
PWD/PhJ m 2.3186 0.1278 2.5701 2.0671
RIIIS/J f 2.87 0.1196 3.1053 2.6347
RIIIS/J m 2.8288 0.1196 3.064 2.5935
SM/J f 2.6025 0.1196 2.8378 2.3672
SM/J m 2.9314 0.1278 3.1829 2.6799
SWR/J f 2.6125 0.1691 2.9452 2.2798
SWR/J m 2.89 0.1278 3.1415 2.6385
WSB/EiJ f 2.3563 0.1196 2.5915 2.121
WSB/EiJ m 2.5033 0.138 2.775 2.2317


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 2.9017 0.0875 3.0739 2.7295
A/J both 2.0779 0.1291 2.332 1.8238
BALB/cByJ both 2.5076 0.099 2.7024 2.3128
BTBR T+ Itpr3tf/J both 2.7442 0.1196 2.9794 2.5089
BUB/BnJ both 2.6075 0.1337 2.8705 2.3445
C3H/HeJ both 2.5965 0.0913 2.7761 2.4168
C57BL/10J both 2.7483 0.0913 2.928 2.5687
C57BL/6J both 2.8657 0.0904 3.0435 2.6879
C57BLKS/J both 2.7721 0.0904 2.95 2.5943
C57BR/cdJ both 2.8163 0.0845 2.9826 2.6499
C57L/J both 2.878 0.0875 3.0502 2.7058
CBA/J both 3.1388 0.0845 3.3051 2.9724
DBA/2J both 2.5249 0.0941 2.71 2.3398
FVB/NJ both 2.7992 0.1024 3.0006 2.5977
KK/HlJ both 2.6174 0.0941 2.8025 2.4323
LP/J both 2.7292 0.0875 2.9014 2.557
MRL/MpJ both 2.205 0.1196 2.4403 1.9697
NOD.B10Sn-H2b/J both 2.7441 0.0964 2.9338 2.5545
NON/ShiLtJ both 3.1313 0.0822 3.293 2.9697
NZO/HlLtJ both 4.4652 0.1134 4.6884 4.2421
NZW/LacJ both 3.6923 0.0875 3.8645 3.5201
P/J both 2.6179 0.0913 2.7976 2.4382
PL/J both 2.589 0.1415 2.8674 2.3106
PWD/PhJ both 2.3212 0.0875 2.4933 2.149
RIIIS/J both 2.8494 0.0845 3.0157 2.683
SM/J both 2.767 0.0875 2.9392 2.5948
SWR/J both 2.7513 0.106 2.9598 2.5427
WSB/EiJ both 2.4298 0.0913 2.6095 2.2501




  GWAS USING LINEAR MIXED MODELS