Project measure / variable:   Ackert1   BMI_M12

ID, description, units MPD:25032   BMI_M12   body mass index (BMI)   [kg/m2]  at age 12mo  
Data set, strains Ackert1   inbred   30 strains     sex: both     age: 52wks
Procedure body size and weight
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  STRAIN COMPARISON PLOT
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Ackert1 - body mass index (BMI) at age 12mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested29 strains28 strains
Mean of the strain means2.86   kg/m2 3.10   kg/m2
Median of the strain means2.79   kg/m2 3.06   kg/m2
SD of the strain means± 0.597 ± 0.432
Coefficient of variation (CV)0.209 0.139
Min–max range of strain means1.93   –   5.46   kg/m2 2.30   –   4.43   kg/m2
Mean sample size per strain7.6   mice 7.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 6.2766 6.2766 55.8104 < 0.0001
strain 26 91.4146 3.5159 31.2631 < 0.0001
sex:strain 26 10.595 0.4075 3.6234 < 0.0001
Residuals 345 38.7998 0.1125


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 2.66 0.204   8 0.072 0.0766 2.44, 2.94 -0.33
129S1/SvImJ m 3.28 0.249   8 0.088 0.0759 2.95, 3.56 0.43
A/J f 2.9 0.427   8 0.151 0.147 2.36, 3.58 0.07
A/J m 2.96 0.218   3 0.126 0.0737 2.78, 3.2 -0.31
AKR/J f 2.84 0.411   3 0.238 0.145 2.41, 3.23 -0.03
BALB/cByJ f 2.72 0.26   8 0.092 0.0957 2.23, 3.03 -0.23
BALB/cByJ m 2.96 0.272   7 0.103 0.0921 2.59, 3.35 -0.31
BTBR T+ Itpr3tf/J f 3.21 0.356   7 0.134 0.111 2.64, 3.62 0.59
BTBR T+ Itpr3tf/J m 3.32 0.471   8 0.167 0.142 2.56, 3.88 0.52
BUB/BnJ f 2.72 0.178   7 0.0672 0.0653 2.44, 2.93 -0.23
BUB/BnJ m 3.08 0.203   8 0.0719 0.066 2.73, 3.35 -0.04
C3H/HeJ f 2.46 0.216   7 0.0816 0.0877 2.18, 2.77 -0.66
C3H/HeJ m 3.06 0.274   7 0.104 0.0894 2.7, 3.43 -0.08
C57BL/10J f 2.66 0.36   8 0.127 0.135 2.17, 3.14 -0.33
C57BL/10J m 3.02 0.325   6 0.133 0.107 2.8, 3.67 -0.17
C57BL/6J f 2.79 0.215   8 0.0759 0.0768 2.57, 3.21 -0.11
C57BL/6J m 3.3 0.374   8 0.132 0.113 2.81, 3.9 0.47
C57BLKS/J f 2.59 0.117   8 0.0414 0.0453 2.42, 2.77 -0.45
C57BLKS/J m 2.84 0.191   8 0.0674 0.0672 2.51, 3.08 -0.59
C57BR/cdJ f 2.61 0.216   7 0.0816 0.0828 2.35, 2.95 -0.41
C57BR/cdJ m 3.1 0.381   3 0.22 0.123 2.73, 3.49 0.01
C57L/J f 2.8 0.189   8 0.0669 0.0676 2.48, 3.08 -0.1
C57L/J m 3.57 0.264   8 0.0934 0.074 3.1, 4.01 1.1
CBA/J f 3.35 0.314   8 0.111 0.0935 2.9, 3.82 0.83
CBA/J m 3.63 0.315   8 0.111 0.0866 3.16, 4.1 1.24
DBA/2J f 2.83 0.33   8 0.117 0.117 2.17, 3.26 -0.05
DBA/2J m 2.83 0.262   9 0.0875 0.0927 2.42, 3.25 -0.61
FVB/NJ f 2.76 0.32   7 0.121 0.116 2.4, 3.17 -0.16
FVB/NJ m 2.94 0.225   9 0.075 0.0766 2.58, 3.27 -0.36
KK/HlJ f 3.0 0.517   8 0.183 0.173 2.06, 3.58 0.24
KK/HlJ m 3.08 0.326   9 0.109 0.106 2.62, 3.51 -0.04
LP/J f 2.43 0.144   8 0.0509 0.0593 2.24, 2.63 -0.72
LP/J m 2.71 0.141   10 0.0445 0.052 2.46, 2.9 -0.89
MRL/MpJ f 2.82 0.342   5 0.153 0.121 2.21, 3.01 -0.06
MRL/MpJ m 2.59 0.736   3 0.425 0.284 1.88, 3.35 -1.17
NOD.B10Sn-H2b/J f 2.79 0.178   8 0.0631 0.0639 2.55, 3.08 -0.11
NOD.B10Sn-H2b/J m 3.2 0.192   8 0.068 0.06 2.95, 3.54 0.24
NON/ShiLtJ f 3.02 0.376   9 0.125 0.124 2.58, 3.83 0.27
NON/ShiLtJ m 3.79 0.55   8 0.195 0.145 2.95, 4.76 1.61
NZO/HlLtJ f 5.46 1.08   7 0.408 0.198 3.73, 6.46 4.36
NZO/HlLtJ m 4.43 0.944   4 0.472 0.213 3.41, 5.52 3.09
NZW/LacJ f 3.69 0.287   9 0.0958 0.0779 3.34, 4.16 1.4
NZW/LacJ m 3.4 0.274   8 0.0969 0.0808 3.12, 3.82 0.71
P/J m 2.54 0.0757   3 0.0437 0.0298 2.45, 2.59 -1.29
PL/J f 2.48 0.14   4 0.0699 0.0565 2.34, 2.66 -0.63
PL/J m 2.79 0.222   8 0.0786 0.0797 2.35, 3.08 -0.71
PWD/PhJ f 1.93 0.134   9 0.0445 0.0691 1.78, 2.2 -1.55
PWD/PhJ m 2.3 0.248   9 0.0825 0.108 2.06, 2.85 -1.84
RIIIS/J f 2.8 0.34   8 0.12 0.121 2.19, 3.29 -0.1
RIIIS/J m 3.34 0.374   8 0.132 0.112 2.84, 3.86 0.57
SJL/J f 2.84 0.173   8 0.0612 0.0609 2.61, 3.08 -0.03
SM/J f 2.87 0.316   8 0.112 0.11 2.43, 3.24 0.02
SM/J m 3.06 0.379   8 0.134 0.124 2.56, 3.64 -0.08
SWR/J f 2.6 0.0878   8 0.031 0.0337 2.42, 2.7 -0.43
SWR/J m 3.02 0.125   7 0.0472 0.0414 2.85, 3.16 -0.17
WSB/EiJ f 2.22 0.199   7 0.0751 0.0896 1.94, 2.43 -1.07
WSB/EiJ m 2.53 0.119   4 0.0595 0.047 2.4, 2.69 -1.31


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 2.6588 0.1186 2.892 2.4255
129S1/SvImJ m 3.28 0.1186 3.5132 3.0468
A/J f 2.9025 0.1186 3.1357 2.6693
A/J m 2.9567 0.1936 3.3375 2.5758
BALB/cByJ f 2.7175 0.1186 2.9507 2.4843
BALB/cByJ m 2.9571 0.1268 3.2064 2.7078
BTBR T+ Itpr3tf/J f 3.2114 0.1268 3.4607 2.9621
BTBR T+ Itpr3tf/J m 3.3237 0.1186 3.557 3.0905
BUB/BnJ f 2.72 0.1268 2.9693 2.4707
BUB/BnJ m 3.0788 0.1186 3.312 2.8455
C3H/HeJ f 2.4629 0.1268 2.7122 2.2136
C3H/HeJ m 3.0643 0.1268 3.3136 2.815
C57BL/10J f 2.6637 0.1186 2.897 2.4305
C57BL/10J m 3.025 0.1369 3.2943 2.7557
C57BL/6J f 2.795 0.1186 3.0282 2.5618
C57BL/6J m 3.3025 0.1186 3.5357 3.0693
C57BLKS/J f 2.5862 0.1186 2.8195 2.353
C57BLKS/J m 2.8375 0.1186 3.0707 2.6043
C57BR/cdJ f 2.6071 0.1268 2.8564 2.3578
C57BR/cdJ m 3.0967 0.1936 3.4775 2.7158
C57L/J f 2.8 0.1186 3.0332 2.5668
C57L/J m 3.5688 0.1186 3.802 3.3355
CBA/J f 3.3538 0.1186 3.587 3.1205
CBA/J m 3.6313 0.1186 3.8645 3.398
DBA/2J f 2.8262 0.1186 3.0595 2.593
DBA/2J m 2.83 0.1118 3.0499 2.6101
FVB/NJ f 2.7614 0.1268 3.0107 2.5121
FVB/NJ m 2.9378 0.1118 3.1576 2.7179
KK/HlJ f 2.9975 0.1186 3.2307 2.7643
KK/HlJ m 3.0789 0.1118 3.2988 2.859
LP/J f 2.4288 0.1186 2.662 2.1955
LP/J m 2.707 0.106 2.9156 2.4984
MRL/MpJ f 2.818 0.15 3.113 2.523
MRL/MpJ m 2.59 0.1936 2.9708 2.2092
NOD.B10Sn-H2b/J f 2.7937 0.1186 3.027 2.5605
NOD.B10Sn-H2b/J m 3.205 0.1186 3.4382 2.9718
NON/ShiLtJ f 3.02 0.1118 3.2399 2.8001
NON/ShiLtJ m 3.7875 0.1186 4.0207 3.5543
NZO/HlLtJ f 5.4557 0.1268 5.705 5.2064
NZO/HlLtJ m 4.4275 0.1677 4.7573 4.0977
NZW/LacJ f 3.6856 0.1118 3.9054 3.4657
NZW/LacJ m 3.395 0.1186 3.6282 3.1618
PL/J f 2.475 0.1677 2.8048 2.1452
PL/J m 2.7862 0.1186 3.0195 2.553
PWD/PhJ f 1.9333 0.1118 2.1532 1.7135
PWD/PhJ m 2.3 0.1118 2.5199 2.0801
RIIIS/J f 2.7987 0.1186 3.032 2.5655
RIIIS/J m 3.3413 0.1186 3.5745 3.108
SM/J f 2.8713 0.1186 3.1045 2.638
SM/J m 3.0625 0.1186 3.2957 2.8293
SWR/J f 2.6025 0.1186 2.8357 2.3693
SWR/J m 3.0171 0.1268 3.2664 2.7678
WSB/EiJ f 2.2171 0.1268 2.4664 1.9678
WSB/EiJ m 2.535 0.1677 2.8648 2.2052


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 2.9694 0.0838 3.1343 2.8045
A/J both 2.9296 0.1135 3.1529 2.7063
BALB/cByJ both 2.8373 0.0868 3.008 2.6666
BTBR T+ Itpr3tf/J both 3.2676 0.0868 3.4383 3.0969
BUB/BnJ both 2.8994 0.0868 3.0701 2.7287
C3H/HeJ both 2.7636 0.0896 2.9399 2.5873
C57BL/10J both 2.8444 0.0906 3.0225 2.6663
C57BL/6J both 3.0488 0.0838 3.2136 2.8839
C57BLKS/J both 2.7119 0.0838 2.8768 2.547
C57BR/cdJ both 2.8519 0.1157 3.0795 2.6243
C57L/J both 3.1844 0.0838 3.3493 3.0195
CBA/J both 3.4925 0.0838 3.6574 3.3276
DBA/2J both 2.8281 0.0815 2.9884 2.6679
FVB/NJ both 2.8496 0.0845 3.0158 2.6834
KK/HlJ both 3.0382 0.0815 3.1984 2.8779
LP/J both 2.5679 0.0795 2.7243 2.4114
MRL/MpJ both 2.704 0.1225 2.9449 2.4631
NOD.B10Sn-H2b/J both 2.9994 0.0838 3.1643 2.8345
NON/ShiLtJ both 3.4037 0.0815 3.564 3.2435
NZO/HlLtJ both 4.9416 0.1051 5.1483 4.7349
NZW/LacJ both 3.5403 0.0815 3.7005 3.38
PL/J both 2.6306 0.1027 2.8326 2.4287
PWD/PhJ both 2.1167 0.079 2.2721 1.9612
RIIIS/J both 3.07 0.0838 3.2349 2.9051
SM/J both 2.9669 0.0838 3.1318 2.802
SWR/J both 2.8098 0.0868 2.9805 2.6391
WSB/EiJ both 2.3761 0.1051 2.5828 2.1694




  GWAS USING LINEAR MIXED MODELS