Project measure / variable:   Jaxpheno5   bw11

ID, description, units MPD:23009   bw11   body weight   [g]  at age 11 wks  
Data set, strains Jaxpheno5   inbred   10 strains     sex: both     age: 11wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Jaxpheno5 - body weight at age 11 wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means21.8   g 27.4   g
Median of the strain means21.8   g 27.1   g
SD of the strain means± 1.18 ± 1.71
Coefficient of variation (CV)0.0543 0.0624
Min–max range of strain means20.1   –   24.4   g 24.9   –   31.3   g
Mean sample size per strain89.0   mice 92.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 5985.8858 5985.8858 2006.9375 < 0.0001
strain 6 479.4397 79.9066 26.791 < 0.0001
sex:strain 6 168.7409 28.1235 9.4292 < 0.0001
Residuals 706 2105.7135 2.9826


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 21.6 1.5   157 0.12 0.069 -0.14
A/J m 24.9 2.5   172 0.191 0.1 -1.45
B6D2F1/J f 22.0 2.21   31 0.396 0.101 17.2, 26.5 0.2
B6D2F1/J m 28.4 1.98   28 0.375 0.0698 24.7, 33.7 0.6
B6.SJL-Ptprca Pepcb/BoyJ f 21.5 1.9   103 0.187 0.088 -0.22
B6.SJL-Ptprca Pepcb/BoyJ m 27.9 2.0   114 0.187 0.072 0.3
BALB/cByJ f 22.2 1.41   58 0.186 0.0636 19.6, 25.9 0.37
BALB/cByJ m 26.7 1.54   59 0.201 0.0577 22.7, 30.2 -0.4
C57BL/6J f 20.1 1.6   108 0.154 0.0796 15.3, 25.2 -1.41
C57BL/6J m 27.0 1.57   104 0.154 0.0581 23.2, 31.7 -0.22
CBA/J f 22.1 2.15   56 0.287 0.0974 16.4, 27.1 0.29
CBA/J m 26.9 1.76   66 0.216 0.0654 21.6, 31.1 -0.28
DBA/2J f 20.5 1.6   30 0.292 0.078 15.4, 22.6 -1.07
DBA/2J m 25.8 1.89   30 0.345 0.0733 21.4, 30.4 -0.92
NOD.CB17-Prkdcscid/J f 21.0 1.2   80 0.134 0.057 -0.64
NOD.CB17-Prkdcscid/J m 27.7 1.8   77 0.205 0.065 0.19
NOD.Cg-Prkdcscid Il2rgtm1Wjl/SzJ f 24.4 1.7   197 0.121 0.07 2.24
NOD.Cg-Prkdcscid Il2rgtm1Wjl/SzJ m 31.3 2.1   200 0.148 0.067 2.29
NOD/ShiLtJ f 22.2 1.7   119 0.156 0.077 0.37
NOD/ShiLtJ m 27.2 1.6   115 0.149 0.059 -0.11


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6D2F1/J f 21.9580645161 0.3101818934 22.5670538747 21.3490751576
B6D2F1/J m 28.4107142857 0.3263760439 29.0514981027 27.7699304687
BALB/cByJ f 22.2448275862 0.2267687953 22.6900495224 21.79960565
BALB/cByJ m 26.7169491525 0.224838813 27.158381897 26.2755164081
C57BL/6J f 20.0925925926 0.1661825474 20.4188637421 19.7663214431
C57BL/6J m 27.0105769231 0.1693482137 27.3430633196 26.6780905265
CBA/J f 22.0571428571 0.2307827139 22.5102454394 21.6040402749
CBA/J m 26.8515151515 0.2125814289 27.2688826083 26.4341476947
DBA/2J f 20.4833333333 0.3153092142 21.1023893137 19.864277353
DBA/2J m 25.7533333333 0.3153092142 26.3723893137 25.134277353
NOD.CB17-Prkdcscid/J f 22.255 0.386173343 23.013185637 21.496814363
NOD.CB17-Prkdcscid/J m 29.03 0.386173343 29.788185637 28.271814363
NOD/ShiLtJ f 22.5292307692 0.2142104292 22.9497964909 22.1086650476
NOD/ShiLtJ m 28.46 0.2574488954 28.9654570913 27.9545429087


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6D2F1/J both 25.1843894009 0.2251300341 25.6263939085 24.7423848933
BALB/cByJ both 24.4808883694 0.1596688592 24.7943710006 24.1674057381
C57BL/6J both 23.5515847578 0.118633318 23.7845010877 23.318668428
CBA/J both 24.4543290043 0.1568849299 24.7623458643 24.1463121444
DBA/2J both 23.1183333333 0.2229572836 23.556072015 22.6805946517
NOD.CB17-Prkdcscid/J both 25.6425 0.2730657896 26.1786182053 25.1063817947
NOD/ShiLtJ both 25.4946153846 0.1674559955 25.8233867327 25.1658440365




  GWAS USING LINEAR MIXED MODELS