Project measure / variable:   Jaxpheno4   MCHC8

ID, description, units MPD:22984   MCHC8   mean RBC hemoglobin concentration (MCHC)   [g/dL]  at age age 8wks  
Data set, strains Jaxpheno4   inbred   11 strains     sex: both     age: 8wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Jaxpheno4 - mean RBC hemoglobin concentration (MCHC) at age age 8wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains11 strains
Mean of the strain means33.6   g/dL 33.0   g/dL
Median of the strain means33.2   g/dL 32.5   g/dL
SD of the strain means± 1.01 ± 1.34
Coefficient of variation (CV)0.0300 0.0405
Min–max range of strain means32.2   –   35.4   g/dL 31.2   –   35.5   g/dL
Mean sample size per strain17.0   mice 17.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 43.887 43.887 37.3269 < 0.0001
strain 10 474.0885 47.4088 40.3223 < 0.0001
sex:strain 10 106.0931 10.6093 9.0235 < 0.0001
Residuals 386 453.8385 1.1757


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.129P2-Apoetm1Unc/J f 33.0 0.476   10 0.15 0.0144 31.8, 33.4 -0.59
B6.129P2-Apoetm1Unc/J m 32.2 0.267   10 0.0843 0.00828 31.7, 32.6 -0.59
B6D2F1/J f 32.7 0.41   10 0.13 0.0126 32.1, 33.3 -0.89
B6D2F1/J m 32.7 1.27   12 0.366 0.0388 31.6, 36.3 -0.22
BALB/cByJ f 34.4 0.412   21 0.0898 0.012 33.5, 35.0 0.8
BALB/cByJ m 35.4 0.696   20 0.156 0.0197 33.4, 36.6 1.8
BALB/cJ f 35.4 0.508   22 0.108 0.0144 34.0, 36.2 1.8
BALB/cJ m 35.5 1.35   21 0.295 0.0381 31.1, 36.9 1.88
C3H/HeJ f 34.5 0.553   13 0.153 0.016 33.6, 35.4 0.9
C3H/HeJ m 33.6 0.359   11 0.108 0.0107 32.8, 34.0 0.46
C57BL/6J f 33.2 1.34   42 0.206 0.0403 32.0, 38.5 -0.39
C57BL/6J m 31.2 1.62   34 0.277 0.0518 25.2, 37.7 -1.34
CBA/J f 32.2 1.17   21 0.256 0.0364 29.0, 33.5 -1.38
CBA/J m 32.4 0.868   23 0.181 0.0268 29.6, 33.4 -0.44
DBA/2J f 32.6 0.811   23 0.169 0.0249 30.4, 33.9 -0.98
DBA/2J m 32.7 0.603   20 0.135 0.0184 31.5, 34.1 -0.22
FVB/NJ f 34.5 0.505   11 0.152 0.0146 33.5, 35.3 0.9
FVB/NJ m 32.3 2.21   14 0.592 0.0686 26.1, 33.9 -0.52
NOD.CB17-Prkdcscid/J f 33.1 0.288   11 0.0867 0.00868 32.6, 33.5 -0.49
NOD.CB17-Prkdcscid/J m 32.5 0.436   12 0.126 0.0134 31.7, 33.1 -0.37
NOD/ShiLtJ f 33.9 1.01   21 0.22 0.0297 32.7, 35.5 0.31
NOD/ShiLtJ m 32.4 1.52   26 0.298 0.0469 26.4, 34.4 -0.44


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J f 32.98 0.3429 33.6542 32.3058
B6.129P2-Apoetm1Unc/J m 32.2 0.3429 32.8742 31.5258
B6D2F1/J f 32.68 0.3429 33.3542 32.0058
B6D2F1/J m 32.7 0.313 33.3154 32.0846
BALB/cByJ f 34.4048 0.2366 34.87 33.9395
BALB/cByJ m 35.385 0.2425 35.8617 34.9083
BALB/cJ f 35.3727 0.2312 35.8273 34.9182
BALB/cJ m 35.4667 0.2366 35.9319 35.0014
C3H/HeJ f 34.5077 0.3007 35.099 33.9164
C3H/HeJ m 33.5909 0.3269 34.2337 32.9481
C57BL/6J f 33.1524 0.1673 33.4813 32.8234
C57BL/6J m 31.2118 0.186 31.5774 30.8461
CBA/J f 32.219 0.2366 32.6843 31.7538
CBA/J m 32.413 0.2261 32.8576 31.9685
DBA/2J f 32.6087 0.2261 33.0532 32.1642
DBA/2J m 32.725 0.2425 33.2017 32.2483
FVB/NJ f 34.5364 0.3269 35.1792 33.8936
FVB/NJ m 32.3 0.2898 32.8698 31.7302
NOD.CB17-Prkdcscid/J f 33.1455 0.3269 33.7882 32.5027
NOD.CB17-Prkdcscid/J m 32.4583 0.313 33.0738 31.8429
NOD/ShiLtJ f 33.9333 0.2366 34.3986 33.4681
NOD/ShiLtJ m 32.4 0.2127 32.8181 31.9819


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J both 32.59 0.2425 33.0667 32.1133
B6D2F1/J both 32.69 0.2321 33.1464 32.2336
BALB/cByJ both 34.8949 0.1694 35.2279 34.5618
BALB/cJ both 35.4197 0.1654 35.7449 35.0945
C3H/HeJ both 34.0493 0.2221 34.486 33.6126
C57BL/6J both 32.1821 0.1251 32.428 31.9362
CBA/J both 32.316 0.1636 32.6378 31.9943
DBA/2J both 32.6668 0.1658 32.9928 32.3409
FVB/NJ both 33.4182 0.2184 33.8477 32.9887
NOD.CB17-Prkdcscid/J both 32.8019 0.2263 33.2468 32.3569
NOD/ShiLtJ both 33.1667 0.1591 33.4794 32.8539




  GWAS USING LINEAR MIXED MODELS