Project measure / variable:   Jaxpheno4   pct_EOS16

ID, description, units MPD:22937   pct_EOS16   eosinophil differential (EOS; percentage of total WBC)   [%]  at age 16wks  
Data set, strains Jaxpheno4   inbred   9 strains     sex: both     age: 16wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Jaxpheno4 - eosinophil differential (EOS; percentage of total WBC) at age 16wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means4.52   % 3.25   %
Median of the strain means3.20   % 2.88   %
SD of the strain means± 4.30 ± 1.82
Coefficient of variation (CV)0.952 0.560
Min–max range of strain means2.07   –   15.9   % 1.65   –   7.67   %
Mean sample size per strain15.7   mice 15.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 73.2614 73.2614 13.2803 0.0003
strain 8 1577.9697 197.2462 35.7553 < 0.0001
sex:strain 8 331.5297 41.4412 7.5121 < 0.0001
Residuals 286 1577.7365 5.5166


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6D2F1/J f 3.14 1.18   16 0.295 0.375 1.4, 6.5 -0.32
B6D2F1/J m 1.72 1.19   10 0.377 0.693 0.6, 4.7 -0.84
BALB/cByJ f 2.69 0.981   21 0.214 0.365 1.1, 4.8 -0.43
BALB/cByJ m 3.04 1.16   22 0.247 0.382 1.2, 5.8 -0.12
C3H/HeJ f 3.2 0.641   10 0.203 0.2 2.0, 4.3 -0.31
C3H/HeJ m 3.96 2.08   11 0.626 0.524 1.8, 8.2 0.39
C57BL/6J f 3.25 2.2   35 0.371 0.676 0.8, 9.7 -0.29
C57BL/6J m 1.65 0.917   30 0.167 0.555 0.6, 4.6 -0.88
CBA/J f 2.07 0.587   22 0.125 0.284 1.3, 3.6 -0.57
CBA/J m 2.33 0.607   23 0.127 0.26 0.8, 3.4 -0.51
DBA/2J f 2.84 0.724   11 0.218 0.255 1.6, 4.0 -0.39
DBA/2J m 2.56 0.792   11 0.239 0.309 1.6, 4.4 -0.38
FVB/NJ f 3.62 1.58   10 0.499 0.436 1.9, 7.0 -0.21
FVB/NJ m 3.45 2.88   11 0.869 0.834 1.0, 11.5 0.11
NOD.CB17-Prkdcscid/J f 15.9 9.01   10 2.85 0.566 7.2, 33.6 2.65
NOD.CB17-Prkdcscid/J m 7.67 3.5   10 1.11 0.457 3.9, 14.0 2.43
NOD/ShiLtJ f 3.96 3.69   20 0.824 0.929 1.6, 18.0 -0.13
NOD/ShiLtJ m 2.88 1.2   21 0.262 0.417 1.2, 5.8 -0.2


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6D2F1/J f 3.1437 0.5872 4.2995 1.988
B6D2F1/J m 1.72 0.7427 3.1819 0.2581
BALB/cByJ f 2.6857 0.5125 3.6945 1.6769
BALB/cByJ m 3.0364 0.5008 4.022 2.0507
C3H/HeJ f 3.2 0.7427 4.6619 1.7381
C3H/HeJ m 3.9636 0.7082 5.3575 2.5697
C57BL/6J f 3.2486 0.397 4.03 2.4671
C57BL/6J m 1.6533 0.4288 2.4974 0.8093
CBA/J f 2.0682 0.5008 3.0538 1.0826
CBA/J m 2.3348 0.4897 3.2987 1.3708
DBA/2J f 2.8364 0.7082 4.2303 1.4425
DBA/2J m 2.5636 0.7082 3.9575 1.1697
FVB/NJ f 3.62 0.7427 5.0819 2.1581
FVB/NJ m 3.4545 0.7082 4.8484 2.0607
NOD.CB17-Prkdcscid/J f 15.94 0.7427 17.4019 14.4781
NOD.CB17-Prkdcscid/J m 7.67 0.7427 9.1319 6.2081
NOD/ShiLtJ f 3.965 0.5252 4.9987 2.9313
NOD/ShiLtJ m 2.881 0.5125 3.8898 1.8721


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6D2F1/J both 2.4319 0.4734 3.3637 1.5001
BALB/cByJ both 2.861 0.3583 3.5662 2.1558
C3H/HeJ both 3.5818 0.5131 4.5918 2.5719
C57BL/6J both 2.451 0.2922 3.0261 1.8758
CBA/J both 2.2015 0.3502 2.8908 1.5122
DBA/2J both 2.7 0.5008 3.6856 1.7144
FVB/NJ both 3.5373 0.5131 4.5472 2.5273
NOD.CB17-Prkdcscid/J both 11.805 0.5252 12.8387 10.7713
NOD/ShiLtJ both 3.423 0.3669 4.1452 2.7008




  GWAS USING LINEAR MIXED MODELS