Project measure / variable:   Jaxpheno3   ALB16

ID, description, units MPD:22811   ALB16   albumin (plasma Alb)   [g/dL]  at age 16wks  
Data set, strains Jaxpheno3   inbred   8 strains     sex: both     age: 16wks
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  STRAIN COMPARISON PLOT
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Jaxpheno3 - albumin (plasma Alb) at age 16wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means3.43   g/dL 3.36   g/dL
Median of the strain means3.42   g/dL 3.55   g/dL
SD of the strain means± 0.530 ± 0.467
Coefficient of variation (CV)0.155 0.139
Min–max range of strain means2.77   –   4.22   g/dL 2.70   –   3.94   g/dL
Mean sample size per strain15.9   mice 16.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0303 0.0303 0.5507 0.4588
strain 7 58.8495 8.4071 152.8169 < 0.0001
sex:strain 7 6.5915 0.9416 17.1163 < 0.0001
Residuals 242 13.3134 0.055


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6D2F1/J f 3.78 0.181   10 0.0573 0.048 3.5, 4.0 0.66
B6D2F1/J m 3.59 0.277   10 0.0875 0.0771 3.3, 4.3 0.5
BALB/cByJ f 2.77 0.122   20 0.0272 0.044 2.5, 3.0 -1.24
BALB/cByJ m 2.7 0.112   20 0.0251 0.0416 2.4, 2.9 -1.41
C3H/HeJ f 3.02 0.0919   10 0.0291 0.0304 2.9, 3.1 -0.77
C3H/HeJ m 2.92 0.0422   10 0.0133 0.0144 2.9, 3.0 -0.94
C57BL/6J f 4.22 0.243   30 0.0444 0.0576 3.6, 4.7 1.49
C57BL/6J m 3.94 0.208   30 0.0379 0.0527 3.4, 4.3 1.25
CBA/J f 3.85 0.0972   10 0.0307 0.0252 3.7, 4.0 0.79
CBA/J m 3.51 0.257   20 0.0575 0.0733 3.1, 3.9 0.32
DBA/2J f 2.95 0.127   10 0.0401 0.043 2.7, 3.1 -0.91
DBA/2J m 2.84 0.0699   10 0.0221 0.0246 2.8, 3.0 -1.11
NOD.CB17-Prkdcscid/J f 3.75 0.0707   10 0.0224 0.0189 3.6, 3.8 0.6
NOD.CB17-Prkdcscid/J m 3.66 0.0843   10 0.0267 0.023 3.5, 3.8 0.65
NOD/ShiLtJ f 3.1 0.5   27 0.0963 0.161 2.0, 4.0 -0.62
NOD/ShiLtJ m 3.71 0.173   21 0.0377 0.0466 3.4, 4.0 0.75


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6D2F1/J f 3.78 0.0742 3.9261 3.6339
B6D2F1/J m 3.59 0.0742 3.7361 3.4439
BALB/cByJ f 2.77 0.0524 2.8733 2.6667
BALB/cByJ m 2.7 0.0524 2.8033 2.5967
C3H/HeJ f 3.02 0.0742 3.1661 2.8739
C3H/HeJ m 2.92 0.0742 3.0661 2.7739
C57BL/6J f 4.2233 0.0428 4.3077 4.139
C57BL/6J m 3.94 0.0428 4.0244 3.8556
CBA/J f 3.85 0.0742 3.9961 3.7039
CBA/J m 3.51 0.0524 3.6133 3.4067
DBA/2J f 2.95 0.0742 3.0961 2.8039
DBA/2J m 2.84 0.0742 2.9861 2.6939
NOD.CB17-Prkdcscid/J f 3.75 0.0742 3.8961 3.6039
NOD.CB17-Prkdcscid/J m 3.66 0.0742 3.8061 3.5139
NOD/ShiLtJ f 3.1037 0.0451 3.1926 3.0148
NOD/ShiLtJ m 3.7095 0.0512 3.8103 3.6087


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6D2F1/J both 3.685 0.0524 3.7883 3.5817
BALB/cByJ both 2.735 0.0371 2.8081 2.6619
C3H/HeJ both 2.97 0.0524 3.0733 2.8667
C57BL/6J both 4.0817 0.0303 4.1413 4.022
CBA/J both 3.68 0.0454 3.7695 3.5905
DBA/2J both 2.895 0.0524 2.9983 2.7917
NOD.CB17-Prkdcscid/J both 3.705 0.0524 3.8083 3.6017
NOD/ShiLtJ both 3.4066 0.0341 3.4738 3.3394




  GWAS USING LINEAR MIXED MODELS