Project measure / variable:   Jaxpheno2   pct_liver16

ID, description, units MPD:22723   pct_liver16   liver weight as percentage of body weight   [%]  at age 16wks  
Data set, strains Jaxpheno2   inbred   9 strains     sex: both     age: 16wks
Procedure organ weights
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Jaxpheno2 - liver weight as percentage of body weight at age 16wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means4.98   % 4.87   %
Median of the strain means4.91   % 4.86   %
SD of the strain means± 0.509 ± 0.342
Coefficient of variation (CV)0.102 0.0702
Min–max range of strain means3.97   –   5.74   % 4.56   –   5.71   %
Mean sample size per strain7.1   mice 7.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.6396 0.6396 1.4442 0.2318
strain 8 16.8135 2.1017 4.7455 < 0.0001
sex:strain 8 6.9801 0.8725 1.9701 0.0558
Residuals 121 53.5883 0.4429


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6D2F1/J f 4.89 0.107   4 0.0534 0.0218 4.74, 4.98 -0.19
B6D2F1/J m 4.59 0.326   5 0.146 0.071 4.33, 5.15 -0.83
BALB/cByJ f 5.74 0.434   10 0.137 0.0756 4.8, 6.38 1.48
BALB/cByJ m 4.87 1.54   10 0.487 0.316 0.55, 5.7 -0.01
C3H/HeJ f 3.97 1.96   5 0.875 0.493 0.5, 5.1 -1.99
C3H/HeJ m 4.96 0.276   5 0.123 0.0557 4.64, 5.34 0.25
C57BL/6J f 4.71 0.316   15 0.0816 0.067 4.41, 5.6 -0.54
C57BL/6J m 4.73 0.335   15 0.0864 0.0707 4.24, 5.39 -0.42
CBA/J f 4.91 0.484   10 0.153 0.0987 4.01, 6.0 -0.15
CBA/J m 4.7 0.368   10 0.116 0.0783 4.09, 5.5 -0.51
DBA/2J f 5.03 0.329   5 0.147 0.0655 4.5, 5.31 0.09
DBA/2J m 4.56 0.314   5 0.14 0.0689 4.09, 4.84 -0.92
FVB/NJ f 5.2 0.249   5 0.111 0.0478 4.91, 5.55 0.42
FVB/NJ m 4.86 0.503   5 0.225 0.104 4.33, 5.58 -0.04
NOD.CB17-Prkdcscid/J f 4.86 0.17   5 0.0759 0.0349 4.58, 5.02 -0.24
NOD.CB17-Prkdcscid/J m 4.89 0.21   5 0.0938 0.0429 4.76, 5.25 0.05
NOD/ShiLtJ f 5.55 0.711   10 0.225 0.128 4.66, 6.74 1.11
NOD/ShiLtJ m 5.71 0.369   10 0.117 0.0646 5.15, 6.52 2.44


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6D2F1/J f 4.89 0.3327 5.5488 4.2312
B6D2F1/J m 4.586 0.2976 5.1752 3.9968
BALB/cByJ f 5.739 0.2104 6.1556 5.3224
BALB/cByJ m 4.873 0.2104 5.2896 4.4564
C3H/HeJ f 3.97 0.2976 4.5592 3.3808
C3H/HeJ m 4.956 0.2976 5.5452 4.3668
C57BL/6J f 4.7147 0.1718 5.0548 4.3745
C57BL/6J m 4.7347 0.1718 5.0748 4.3945
CBA/J f 4.91 0.2104 5.3266 4.4934
CBA/J m 4.701 0.2104 5.1176 4.2844
DBA/2J f 5.026 0.2976 5.6152 4.4368
DBA/2J m 4.558 0.2976 5.1472 3.9688
FVB/NJ f 5.204 0.2976 5.7932 4.6148
FVB/NJ m 4.856 0.2976 5.4452 4.2668
NOD.CB17-Prkdcscid/J f 4.858 0.2976 5.4472 4.2688
NOD.CB17-Prkdcscid/J m 4.894 0.2976 5.4832 4.3048
NOD/ShiLtJ f 5.549 0.2104 5.9656 5.1324
NOD/ShiLtJ m 5.708 0.2104 6.1246 5.2914


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6D2F1/J both 4.738 0.2232 5.1799 4.2961
BALB/cByJ both 5.306 0.1488 5.6006 5.0114
C3H/HeJ both 4.463 0.2104 4.8796 4.0464
C57BL/6J both 4.7247 0.1215 4.9652 4.4841
CBA/J both 4.8055 0.1488 5.1001 4.5109
DBA/2J both 4.792 0.2104 5.2086 4.3754
FVB/NJ both 5.03 0.2104 5.4466 4.6134
NOD.CB17-Prkdcscid/J both 4.876 0.2104 5.2926 4.4594
NOD/ShiLtJ both 5.6285 0.1488 5.9231 5.3339




  GWAS USING LINEAR MIXED MODELS