Project measure / variable:   Crabbe5   dist_EtOH_D3

ID, description, units MPD:19605   dist_EtOH_D3   distance traveled, 1.6mm rod, 6mm space   [cm]  day3 ethanol  
ethanol study
Data set, strains Crabbe5   inbred   8 strains     sex: both     age: 8-10wks
Procedure parallel rod floor test
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  STRAIN COMPARISON PLOT
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Crabbe5 - distance traveled, 1.6mm rod, 6mm space day3 ethanol



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested7 strains8 strains
Mean of the strain means1145   cm 1208   cm
Median of the strain means979   cm 1161   cm
SD of the strain means± 520 ± 557
Coefficient of variation (CV)0.454 0.462
Min–max range of strain means425   –   1761   cm 505   –   1931   cm
Mean sample size per strain5.6   mice 5.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 216460.0128 216460.0128 0.5226 0.4724
strain 6 16333926.6586 2722321.1098 6.5722 < 0.0001
sex:strain 6 1227878.5902 204646.4317 0.4941 0.8105
Residuals 64 26509924.0333 414217.563


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 425.0 86.1   6 35.2 0.202 278.0, 509.0 -1.39
129S1/SvImJ m 512.0 233.0   6 95.2 0.456 211.0, 802.0 -1.25
A/J f 725.0 294.0   6 120.0 0.406 439.0, 1287.0 -0.81
A/J m 505.0 215.0   6 88.0 0.427 227.0, 824.0 -1.26
BALB/cByJ f 979.0 257.0   3 149.0 0.263 695.0, 1197.0 -0.32
BALB/cByJ m 1288.0 1223.0   6 499.0 0.949 581.0, 3773.0 0.14
BTBR T+ Itpr3tf/J f 1674.0 697.0   6 285.0 0.417 855.0, 2750.0 1.02
BTBR T+ Itpr3tf/J m 1535.0 1068.0   5 478.0 0.696 450.0, 3270.0 0.59
C3H/HeJ f 1562.0 399.0   6 163.0 0.255 1170.0, 2097.0 0.8
C3H/HeJ m 1034.0 451.0   6 184.0 0.436 530.0, 1619.0 -0.31
C57BL/6J f 892.0 591.0   6 241.0 0.663 336.0, 1980.0 -0.49
C57BL/6J m 963.0 531.0   6 217.0 0.552 525.0, 1994.0 -0.44
DBA/2J f 1761.0 1064.0   6 435.0 0.604 509.0, 3634.0 1.18
DBA/2J m 1894.0 313.0   4 156.0 0.165 1476.0, 2190.0 1.23
FVB/NJ m 1931.0 1042.0   6 426.0 0.54 403.0, 3382.0 1.3


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 425.3333 262.7475 950.2319 0.0
129S1/SvImJ m 512.0 262.7475 1036.8985 0.0
A/J f 724.8333 262.7475 1249.7319 199.9348
A/J m 504.6667 262.7475 1029.5652 0.0
BALB/cByJ f 979.0 371.5811 1721.3186 236.6814
BALB/cByJ m 1288.3333 262.7475 1813.2319 763.4348
BTBR T+ Itpr3tf/J f 1674.1667 262.7475 2199.0652 1149.2681
BTBR T+ Itpr3tf/J m 1534.6 287.8255 2109.5975 959.6025
C3H/HeJ f 1562.0 262.7475 2086.8985 1037.1015
C3H/HeJ m 1034.5 262.7475 1559.3985 509.6015
C57BL/6J f 891.5 262.7475 1416.3985 366.6015
C57BL/6J m 962.6667 262.7475 1487.5652 437.7681
DBA/2J f 1761.1667 262.7475 2286.0652 1236.2681
DBA/2J m 1894.0 321.7987 2536.8668 1251.1332


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 468.6667 185.7906 839.826 97.5074
A/J both 614.75 185.7906 985.9093 243.5907
BALB/cByJ both 1133.6667 227.546 1588.2421 679.0912
BTBR T+ Itpr3tf/J both 1604.3833 194.8588 1993.6585 1215.1082
C3H/HeJ both 1298.25 185.7906 1669.4093 927.0907
C57BL/6J both 927.0833 185.7906 1298.2426 555.924
DBA/2J both 1827.5833 207.7202 2242.552 1412.6146




  GWAS USING LINEAR MIXED MODELS