Project measure / variable:   Bennett4   X_ave_HFHS

ID, description, units MPD:114870   X_ave_HFHS   activity on x-axis total (beam breaks), average for day and night   [n]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
Ontology mappings

  STRAIN COMPARISON PLOT
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Bennett4 - activity on x-axis total (beam breaks), average for day and night HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means957.4   n
Median of the strain means799.2   n
SD of the strain means± 415.6
Coefficient of variation (CV)0.4341
Min–max range of strain means614.2   –   2395.0   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 15663217.0012 745867.4762 1.9804 0.0165
Residuals 76 28624063.0602 376632.4087


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 717.7 101.4   5 45.347 0.1413 599.1, 802.6 -0.58
CC002/Unc f 677.4 157.0   5 70.2 0.2317 472.5, 837.8 -0.67
CC004/TauUnc f 1622.0 514.0   5 229.9 0.317 999.4, 2336.0 1.6
CC006/TauUnc f 857.8 479.6   4 239.8 0.5592 156.3, 1233.0 -0.24
CC008/GeniUnc f 781.8 300.1   4 150.1 0.3839 385.3, 1059.0 -0.42
CC011/Unc f 882.1 253.4   5 113.3 0.2873 630.2, 1274.0 -0.18
CC012/GeniUnc f 627.3 123.0   4 61.5 0.1961 514.0, 794.9 -0.79
CC019/TauUnc f 752.6 100.4   5 44.892 0.1334 591.1, 844.5 -0.49
CC024/GeniUnc f 1133.0 93.34   2   66.0 0.0824 1067.0, 1199.0 0.42
CC027/GeniUnc f 1539.0 247.5   5 110.7 0.1608 1239.0, 1854.0 1.4
CC028/GeniUnc f 678.1 234.7   4 117.4 0.3462 391.1, 962.6 -0.67
CC030/GeniUnc f 764.0 99.29   5 44.402 0.13 631.0, 865.1 -0.47
CC032/GeniUnc f 944.8 176.3   5 78.84 0.1866 713.7, 1199.0 -0.03
CC035/Unc f 731.8 283.8   5 126.9 0.3878 360.7, 1134.0 -0.54
CC036/Unc f 994.9 235.1   5 105.2 0.2363 647.3, 1299.0 0.09
CC037/TauUnc f 816.7 449.0   5 200.8 0.5499 288.5, 1226.0 -0.34
CC040/TauUnc f 982.1 267.7   4 133.8 0.2726 595.4, 1212.0 0.06
CC041/TauUnc f 614.2 300.9   5 134.6 0.4899 240.6, 928.0 -0.83
CC045/GeniUnc f 2395.0 2760.0   4 1380.0 1.1526 841.0, 6531.0 3.46
CC059/TauUnc f 699.5 341.8   5 152.9 0.4886 219.9, 997.4 -0.62
CC063/Unc f 779.7 290.6   3 167.8 0.3727 494.1, 1075.0 -0.43
CC071/TauUnc f 1071.0 200.9   4 100.5 0.1876 830.8, 1321.0 0.27


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 717.66 274.4567028463 1264.2878975924 171.0321024076
CC002/Unc f 677.36 274.4567028463 1223.9878975924 130.7321024076
CC004/TauUnc f 1621.68 274.4567028463 2168.3078975924 1075.0521024076
CC006/TauUnc f 857.75 306.8519222224 1468.8985687072 246.6014312928
CC008/GeniUnc f 781.825 306.8519222224 1392.9735687072 170.6764312928
CC011/Unc f 882.1 274.4567028463 1428.7278975924 335.4721024076
CC012/GeniUnc f 627.3 306.8519222224 1238.4485687072 16.1514312928
CC019/TauUnc f 752.62 274.4567028463 1299.2478975924 205.9921024076
CC024/GeniUnc f 1133.0 433.9541500472 1997.2945944907 268.7054055093
CC027/GeniUnc f 1539.2 274.4567028463 2085.8278975924 992.5721024076
CC028/GeniUnc f 678.15 306.8519222224 1289.2985687072 67.0014312928
CC030/GeniUnc f 763.98 274.4567028463 1310.6078975924 217.3521024076
CC032/GeniUnc f 944.84 274.4567028463 1491.4678975924 398.2121024076
CC035/Unc f 731.78 274.4567028463 1278.4078975924 185.1521024076
CC036/Unc f 994.94 274.4567028463 1541.5678975924 448.3121024076
CC037/TauUnc f 816.66 274.4567028463 1363.2878975924 270.0321024076
CC040/TauUnc f 982.1 306.8519222224 1593.2485687072 370.9514312928
CC041/TauUnc f 614.24 274.4567028463 1160.8678975924 67.6121024076
CC045/GeniUnc f 2394.75 306.8519222224 3005.8985687072 1783.6014312928
CC059/TauUnc f 699.54 274.4567028463 1246.1678975924 152.9121024076
CC063/Unc f 779.7333333333 354.3220797929 1485.4269146493 74.0397520174
CC071/TauUnc f 1070.7 306.8519222224 1681.8485687072 459.5514312928




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA