Project measure / variable:   Bennett4   CRE_base_HFHS

ID, description, units MPD:114742   CRE_base_HFHS   plasma creatinine amount, baseline   [µmol/L]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 8-11wks
Procedure metabolic panel
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  STRAIN COMPARISON PLOT
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Bennett4 - plasma creatinine amount, baseline HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means24.087   µmol/L
Median of the strain means23.352   µmol/L
SD of the strain means± 5.7924
Coefficient of variation (CV)0.2405
Min–max range of strain means14.55   –   38.183   µmol/L
Mean sample size per strain4.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 3010.2393 143.3447 1.0396 0.429
Residuals 79 10893.242 137.8891


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 36.15 10.978   5 4.9094 0.3037 22.8, 51.45 2.08
CC002/Unc f 23.23 8.4686   5 3.7873 0.3646 14.4, 35.85 -0.15
CC004/TauUnc f 26.9 10.768   5 4.8154 0.4003 15.6, 44.7 0.49
CC006/TauUnc f 23.475 8.557   4 4.2785 0.3645 12.6, 32.4 -0.11
CC008/GeniUnc f 27.25 7.7608   4 3.8804 0.2848 16.5, 33.6 0.55
CC011/Unc f 31.47 9.5462   5 4.2692 0.3033 19.2, 45.3 1.27
CC012/GeniUnc f 18.54 8.701   5 3.8912 0.4693 10.8, 33.3 -0.96
CC019/TauUnc f 20.49 7.0545   5 3.1549 0.3443 14.4, 29.25 -0.62
CC024/GeniUnc f 22.125 9.8641   2   6.975 0.4458 15.15, 29.1 -0.34
CC027/GeniUnc f 26.68 12.949   5 5.7911 0.4854 10.2, 43.4 0.45
CC028/GeniUnc f 14.55 8.2759   4 4.1379 0.5688 9.3, 26.7 -1.65
CC030/GeniUnc f 18.03 6.928   5 3.0983 0.3842 9.0, 27.45 -1.05
CC032/GeniUnc f 19.26 8.5306   5 3.815 0.4429 9.45, 33.0 -0.83
CC035/Unc f 20.58 18.048   5 8.0714 0.877 6.9, 51.6 -0.61
CC036/Unc f 29.004 12.058   5 5.3927 0.4158 15.45, 47.1 0.85
CC037/TauUnc f 22.892 6.9818   5 3.1223 0.305 12.9, 30.31 -0.21
CC040/TauUnc f 23.58 17.126   5 7.6589 0.7263 7.5, 43.5 -0.09
CC041/TauUnc f 24.09 14.503   5 6.4861 0.602 9.15, 48.3 0.0
CC045/GeniUnc f 24.338 18.551   4 9.2754 0.7622 11.4, 51.0 0.04
CC059/TauUnc f 20.58 10.219   5 4.5701 0.4965 14.4, 38.7 -0.61
CC063/Unc f 38.183 20.963   3 12.103 0.549 24.9, 62.35 2.43
CC071/TauUnc f 18.51 11.336   5 5.0698 0.6125 11.1, 38.1 -0.96


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 36.15 5.2514595996 46.602768864 25.697231136
CC002/Unc f 23.23 5.2514595996 33.682768864 12.777231136
CC004/TauUnc f 26.9 5.2514595996 37.352768864 16.447231136
CC006/TauUnc f 23.475 5.8713103229 35.1615508665 11.7884491335
CC008/GeniUnc f 27.25 5.8713103229 38.9365508665 15.5634491335
CC011/Unc f 31.47 5.2514595996 41.922768864 21.017231136
CC012/GeniUnc f 18.54 5.2514595996 28.992768864 8.087231136
CC019/TauUnc f 20.49 5.2514595996 30.942768864 10.037231136
CC024/GeniUnc f 22.125 8.3032866875 38.6522787328 5.5977212672
CC027/GeniUnc f 26.68 5.2514595996 37.132768864 16.227231136
CC028/GeniUnc f 14.55 5.8713103229 26.2365508665 2.8634491335
CC030/GeniUnc f 18.03 5.2514595996 28.482768864 7.577231136
CC032/GeniUnc f 19.26 5.2514595996 29.712768864 8.807231136
CC035/Unc f 20.58 5.2514595996 31.032768864 10.127231136
CC036/Unc f 29.0036 5.2514595996 39.456368864 18.550831136
CC037/TauUnc f 22.892 5.2514595996 33.344768864 12.439231136
CC040/TauUnc f 23.58 5.2514595996 34.032768864 13.127231136
CC041/TauUnc f 24.09 5.2514595996 34.542768864 13.637231136
CC045/GeniUnc f 24.3375 5.8713103229 36.0240508665 12.6509491335
CC059/TauUnc f 20.58 5.2514595996 31.032768864 10.127231136
CC063/Unc f 38.1833333333 6.7796051908 51.6777999107 24.6888667559
CC071/TauUnc f 18.51 5.2514595996 28.962768864 8.057231136




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA