Project measure / variable:   Graham3   ics_CD4_pos_IL17_pos

ID, description, units MPD:113843   ics_CD4_pos_IL17_pos   percentage of splenic CD4+ T cells that are IL-17+ by intracellular cytokine staining following stimulation with anti-CD3 and anti-CD28   [%]  
Data set, strains Graham3   CC RIX   102 strains     sex: m     age: 8-10wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Graham3 - percentage of splenic CD4+ T cells that are IL-17+ by intracellular cytokine staining following stimulation with anti-CD3 and anti-CD28



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested102 strains
Mean of the strain means0.71304   %
Median of the strain means0.36283   %
SD of the strain means± 1.004
Coefficient of variation (CV)1.4081
Min–max range of strain means0.02917   –   5.6983   %
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 101 541.983 5.3662 3.2341 < 0.0001
Residuals 358 594.0065 1.6592


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 055) m 0.03413 0.0097619   6 0.00398528 0.286 0.0256, 0.0507 -0.68
RIX:CC(001 x 074) m 0.05587 0.05703   3 0.03293 1.0209 -0.65
RIX:CC(002 x 011) m 1.3002 0.95407   5 0.42667 0.7338 0.528, 2.85 0.58
RIX:CC(002 x 021) m 0.42433 0.42281   6 0.17261 0.9964 -0.29
RIX:CC(003 x 051) m 3.165 3.1276   6 1.2768 0.9882 0.409, 7.39 2.44
RIX:CC(003 x 062) m 1.515 2.1102   6 0.86147 1.3928 0.128, 5.6 0.8
RIX:CC(004 x 011) m 0.7135 0.42963   6 0.17539 0.6021 0.214, 1.25 0.0
RIX:CC(004 x 012) m 0.71073 0.77916   6 0.31809 1.0963 0.0146, 1.9 0.0
RIX:CC(005 x 001) m 0.31382 0.24201   6 0.0988 0.7712 0.0249, 0.651 -0.4
RIX:CC(005 x 038) m 0.37967 0.15526   3 0.08964 0.4089 0.234, 0.543 -0.33
RIX:CC(005 x 040) m 4.4345 4.7124   6 1.9238 1.0627 0.907, 12.9 3.71
RIX:CC(006 x 007) m 0.0812 0.04645   6 0.01896 0.572 0.0151, 0.157 -0.63
RIX:CC(006 x 039) m 0.20283 0.18025   3 0.10407 0.8887 0.0465, 0.4 -0.51
RIX:CC(007 x 070) m 0.07713 0.02221   3 0.01282 0.288 0.0545, 0.0989 -0.63
RIX:CC(008 x 009) m 0.21233 0.103   3 0.05947 0.4851 0.104, 0.309 -0.5
RIX:CC(008 x 010) m 0.441 0.46457   3 0.26822 1.0534 -0.27
RIX:CC(008 x 018) m 0.54533 0.17158   3 0.09906 0.3146 0.409, 0.738 -0.17
RIX:CC(009 x 040) m 1.5285 0.79606   6 0.32499 0.5208 0.471, 2.77 0.81
RIX:CC(010 x 015) m 0.2136 0.33638   6 0.13733 1.5748 0.068, 0.9 -0.5
RIX:CC(010 x 060) m 0.19913 0.13033   3 0.07525 0.6545 0.0914, 0.344 -0.51
RIX:CC(011 x 032) m 0.36733 0.15307   3 0.08837 0.4167 0.217, 0.523 -0.34
RIX:CC(011 x 042) m 0.434 0.21274   6 0.08685 0.4902 0.112, 0.691 -0.28
RIX:CC(012 x 032) m 0.59583 0.63366   6 0.25869 1.0635 0.012, 1.61 -0.12
RIX:CC(012 x 038) m 0.29693 0.29264   3 0.16896 0.9855 0.0728, 0.628 -0.41
RIX:CC(013 x 041) m 0.26382 0.14393   9 0.04798 0.5456 0.0784, 0.476 -0.45
RIX:CC(014 x 059) m 0.10275 0.04175   6 0.01705 0.4063 0.0593, 0.182 -0.61
RIX:CC(015 x 018) m 2.5427 3.9199   6 1.6003 1.5417 0.216, 10.4 1.82
RIX:CC(015 x 059) m 0.21327 0.32804   3 0.18939 1.5381 -0.5
RIX:CC(016 x 038) m 4.152 4.6703   6 1.9066 1.1248 0.0161, 10.5 3.43
RIX:CC(017 x 004) m 0.31167 0.26604   6 0.10861 0.8536 0.157, 0.85 -0.4
RIX:CC(017 x 041) m 1.1283 1.1666   6 0.47626 1.0339 0.202, 3.2 0.41
RIX:CC(018 x 009) m 0.4526 0.40417   3 0.23335 0.893 0.0948, 0.891 -0.26
RIX:CC(018 x 065) m 1.1893 0.62058   3 0.35829 0.5218 0.478, 1.62 0.47
RIX:CC(019 x 002) m 0.67184 0.61423   11 0.1852 0.9143 0.011, 1.78 -0.04
RIX:CC(019 x 004) m 0.86217 0.70997   6 0.28985 0.8235 0.101, 1.91 0.15
RIX:CC(019 x 027) m 0.21733 0.07565   3 0.04367 0.3481 0.131, 0.272 -0.49
RIX:CC(021 x 023) m 0.37867 0.09569   3 0.05525 0.2527 0.295, 0.483 -0.33
RIX:CC(022 x 024) m 1.472 1.2613   3 0.7282 0.8568 0.396, 2.86 0.76
RIX:CC(022 x 044) m 0.22643 0.24193   3 0.13968 1.0684 0.0603, 0.504 -0.48
RIX:CC(023 x 025) m 2.6773 1.3339   6 0.54457 0.4982 0.514, 4.6 1.96
RIX:CC(024 x 023) m 0.116 0.07418   6 0.03028 0.6394 0.0552, 0.255 -0.59
RIX:CC(024 x 052) m 0.04867 0.02414   3 0.01394 0.4961 0.0287, 0.0755 -0.66
RIX:CC(025 x 028) m 0.41 0.20489   6 0.08364 0.4997 0.137, 0.703 -0.3
RIX:CC(026 x 034) m 0.24467 0.08255   6 0.0337 0.3374 0.117, 0.367 -0.47
RIX:CC(027 x 036) m 0.33567 0.20698   3 0.1195 0.6166 0.201, 0.574 -0.38
RIX:CC(027 x 045) m 3.6867 0.6787   3 0.39185 0.1841 3.1, 4.43 2.96
RIX:CC(029 x 027) m 0.87317 0.61527   6 0.25118 0.7046 0.367, 2.04 0.16
RIX:CC(029 x 071) m 0.761 0.10022   3 0.05786 0.1317 0.653, 0.851 0.05
RIX:CC(030 x 023) m 1.52 0.62482   3 0.36074 0.4111 0.8, 1.92 0.8
RIX:CC(030 x 061) m 3.3383 2.0936   6 0.85469 0.6271 1.06, 6.27 2.61
RIX:CC(032 x 013) m 1.0728 0.58383   6 0.23835 0.5442 0.288, 1.83 0.36
RIX:CC(032 x 017) m 0.04787 0.02692   6 0.01099 0.5623 0.0118, 0.0945 -0.66
RIX:CC(033 x 046) m 0.2937 0.50477   6 0.20607 1.7186 -0.42
RIX:CC(035 x 020) m 0.19933 0.07868   3 0.04543 0.3947 0.113, 0.267 -0.51
RIX:CC(035 x 071) m 0.12567 0.02479   3 0.01431 0.1972 0.108, 0.154 -0.59
RIX:CC(036 x 051) m 0.41133 0.15286   3 0.08825 0.3716 0.287, 0.582 -0.3
RIX:CC(037 x 046) m 0.1637 0.1077   3 0.06218 0.6579 0.0981, 0.288 -0.55
RIX:CC(037 x 057) m 0.1436 0.10639   6 0.04343 0.7409 -0.57
RIX:CC(038 x 013) m 0.44838 0.42714   6 0.17438 0.9526 0.0235, 1.16 -0.26
RIX:CC(039 x 020) m 0.35833 0.15595   3 0.09004 0.4352 0.187, 0.492 -0.35
RIX:CC(040 x 003) m 1.5467 1.4441   6 0.58956 0.9337 0.11, 3.65 0.83
RIX:CC(040 x 015) m 0.0967 0.0595   3 0.03435 0.6153 0.0331, 0.151 -0.61
RIX:CC(041 x 012) m 0.21307 0.15612   6 0.06373 0.7327 0.0834, 0.512 -0.5
RIX:CC(041 x 016) m 0.33183 0.09651   6 0.0394 0.2908 0.236, 0.501 -0.38
RIX:CC(042 x 017) m 0.622 0.0956   3 0.05519 0.1537 0.524, 0.715 -0.09
RIX:CC(042 x 019) m 5.6983 4.5163   6 1.8438 0.7926 4.97
RIX:CC(043 x 033) m 0.08433 0.07308   3 0.04219 0.8665 -0.63
RIX:CC(043 x 037) m 0.06728 0.04852   6 0.01981 0.7211 0.0144, 0.137 -0.64
RIX:CC(044 x 060) m 0.18923 0.12013   3 0.06936 0.6348 0.0967, 0.325 -0.52
RIX:CC(045 x 044) m 1.1578 0.61046   6 0.24922 0.5272 0.624, 2.1 0.44
RIX:CC(046 x 068) m 0.44037 0.53945   6 0.22023 1.225 0.0514, 1.37 -0.27
RIX:CC(049 x 036) m 0.03097 0.00739347   3 0.00426862 0.2388 0.0256, 0.0394 -0.68
RIX:CC(051 x 005) m 0.52189 0.55136   7 0.20839 1.0565 0.035, 1.5 -0.19
RIX:CC(051 x 009) m 0.5239 0.41433   6 0.16915 0.7909 0.0884, 1.05 -0.19
RIX:CC(052 x 007) m 0.0587 0.04414   3 0.02548 0.7519 0.0171, 0.105 -0.65
RIX:CC(052 x 014) m 0.1482 0.23047   5 0.10307 1.5551 0.0347, 0.56 -0.56
RIX:CC(055 x 006) m 0.02917 0.01885   3 0.01088 0.6464 0.0105, 0.0482 -0.68
RIX:CC(055 x 028) m 0.866 0.56011   3 0.32338 0.6468 0.383, 1.48 0.15
RIX:CC(056 x 033) m 0.16577 0.13255   3 0.07653 0.7996 0.0493, 0.31 -0.55
RIX:CC(057 x 052) m 0.23893 0.29377   6 0.11993 1.2295 -0.47
RIX:CC(058 x 022) m 0.16067 0.04165   3 0.02404 0.2592 0.113, 0.19 -0.55
RIX:CC(059 x 065) m 1.3378 1.0251   6 0.41849 0.7662 0.281, 2.62 0.62
RIX:CC(060 x 006) m 0.2975 0.16332   6 0.06667 0.549 0.136, 0.579 -0.41
RIX:CC(060 x 037) m 0.10473 0.04882   3 0.02819 0.4661 0.0736, 0.161 -0.61
RIX:CC(061 x 025) m 0.09297 0.02746   3 0.01586 0.2954 0.0718, 0.124 -0.62
RIX:CC(061 x 026) m 0.84067 0.93698   6 0.38252 1.1146 0.156, 2.13 0.13
RIX:CC(061 x 039) m 0.3175 0.11469   6 0.04682 0.3612 0.186, 0.432 -0.39
RIX:CC(062 x 046) m 0.12383 0.04382   3 0.0253 0.3539 0.0815, 0.169 -0.59
RIX:CC(062 x 072) m 0.449 0.50471   3 0.29139 1.1241 0.119, 1.03 -0.26
RIX:CC(063 x 001) m 0.11713 0.0565   3 0.03262 0.4823 0.0544, 0.164 -0.59
RIX:CC(063 x 002) m 0.424 0.06664   3 0.03848 0.1572 0.355, 0.488 -0.29
RIX:CC(065 x 010) m 1.5207 2.0518   6 0.83766 1.3493 0.8
RIX:CC(065 x 072) m 0.447 0.38944   3 0.22484 0.8712 -0.26
RIX:CC(068 x 035) m 0.368 0.05032   3 0.02905 0.1367 0.336, 0.426 -0.34
RIX:CC(068 x 043) m 0.22333 0.09286   3 0.05361 0.4158 0.143, 0.325 -0.49
RIX:CC(070 x 003) m 0.14937 0.11955   3 0.06902 0.8004 0.0181, 0.252 -0.56
RIX:CC(072 x 063) m 0.79667 0.69082   3 0.39885 0.8671 0.08
RIX:CC(072 x 075) m 0.808 0.0945   3 0.05456 0.117 0.699, 0.867 0.09
RIX:CC(074 x 058) m 0.17133 0.04598   3 0.02655 0.2684 0.122, 0.213 -0.54
RIX:CC(074 x 062) m 0.12297 0.03032   3 0.01751 0.2466 0.0889, 0.147 -0.59
RIX:CC(075 x 021) m 0.12453 0.0649   3 0.03747 0.5212 0.0496, 0.163 -0.59
RIX:CC(075 x 035) m 0.99867 0.4429   3 0.25571 0.4435 0.735, 1.51 0.28


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 055) m 0.0341333333 0.5258700568 1.0683159703 -1.0000493036
RIX:CC(001 x 074) m 0.0558666667 0.7436925664 1.5184217778 -1.4066884445
RIX:CC(002 x 011) m 1.3002 0.5760617848 2.4330903177 0.1673096823
RIX:CC(002 x 021) m 0.4243333333 0.5258700568 1.4585159703 -0.6098493036
RIX:CC(003 x 051) m 3.165 0.5258700568 4.199182637 2.130817363
RIX:CC(003 x 062) m 1.515 0.5258700568 2.549182637 0.480817363
RIX:CC(004 x 011) m 0.7135 0.5258700568 1.747682637 -0.320682637
RIX:CC(004 x 012) m 0.7107333333 0.5258700568 1.7449159703 -0.3234493036
RIX:CC(005 x 001) m 0.3138166667 0.5258700568 1.3479993036 -0.7203659703
RIX:CC(005 x 038) m 0.3796666667 0.7436925664 1.8422217778 -1.0828884445
RIX:CC(005 x 040) m 4.4345 0.5258700568 5.468682637 3.400317363
RIX:CC(006 x 007) m 0.0812 0.5258700568 1.115382637 -0.952982637
RIX:CC(006 x 039) m 0.2028333333 0.7436925664 1.6653884445 -1.2597217778
RIX:CC(007 x 070) m 0.0771333333 0.7436925664 1.5396884445 -1.3854217778
RIX:CC(008 x 009) m 0.2123333333 0.7436925664 1.6748884445 -1.2502217778
RIX:CC(008 x 010) m 0.441 0.7436925664 1.9035551112 -1.0215551112
RIX:CC(008 x 018) m 0.5453333333 0.7436925664 2.0078884445 -0.9172217778
RIX:CC(009 x 040) m 1.5285 0.5258700568 2.562682637 0.494317363
RIX:CC(010 x 015) m 0.2136 0.5258700568 1.247782637 -0.820582637
RIX:CC(010 x 060) m 0.1991333333 0.7436925664 1.6616884445 -1.2634217778
RIX:CC(011 x 032) m 0.3673333333 0.7436925664 1.8298884445 -1.0952217778
RIX:CC(011 x 042) m 0.434 0.5258700568 1.468182637 -0.600182637
RIX:CC(012 x 032) m 0.5958333333 0.5258700568 1.6300159703 -0.4383493036
RIX:CC(012 x 038) m 0.2969333333 0.7436925664 1.7594884445 -1.1656217778
RIX:CC(013 x 041) m 0.2638222222 0.4293711034 1.1082288094 -0.5805843649
RIX:CC(014 x 059) m 0.10275 0.5258700568 1.136932637 -0.931432637
RIX:CC(015 x 018) m 2.5426666667 0.5258700568 3.5768493036 1.5084840297
RIX:CC(015 x 059) m 0.2132666667 0.7436925664 1.6758217778 -1.2492884445
RIX:CC(016 x 038) m 4.15195 0.5258700568 5.186132637 3.117767363
RIX:CC(017 x 004) m 0.3116666667 0.5258700568 1.3458493036 -0.7225159703
RIX:CC(017 x 041) m 1.1283333333 0.5258700568 2.1625159703 0.0941506964
RIX:CC(018 x 009) m 0.4526 0.7436925664 1.9151551112 -1.0099551112
RIX:CC(018 x 065) m 1.1893333333 0.7436925664 2.6518884445 -0.2732217778
RIX:CC(019 x 002) m 0.6718363636 0.3883807761 1.43563086 -0.0919581327
RIX:CC(019 x 004) m 0.8621666667 0.5258700568 1.8963493036 -0.1720159703
RIX:CC(019 x 027) m 0.2173333333 0.7436925664 1.6798884445 -1.2452217778
RIX:CC(021 x 023) m 0.3786666667 0.7436925664 1.8412217778 -1.0838884445
RIX:CC(022 x 024) m 1.472 0.7436925664 2.9345551112 0.0094448888
RIX:CC(022 x 044) m 0.2264333333 0.7436925664 1.6889884445 -1.2361217778
RIX:CC(023 x 025) m 2.6773333333 0.5258700568 3.7115159703 1.6431506964
RIX:CC(024 x 023) m 0.116 0.5258700568 1.150182637 -0.918182637
RIX:CC(024 x 052) m 0.0486666667 0.7436925664 1.5112217778 -1.4138884445
RIX:CC(025 x 028) m 0.41 0.5258700568 1.444182637 -0.624182637
RIX:CC(026 x 034) m 0.2446666667 0.5258700568 1.2788493036 -0.7895159703
RIX:CC(027 x 036) m 0.3356666667 0.7436925664 1.7982217778 -1.1268884445
RIX:CC(027 x 045) m 3.6866666667 0.7436925664 5.1492217778 2.2241115555
RIX:CC(029 x 027) m 0.8731666667 0.5258700568 1.9073493036 -0.1610159703
RIX:CC(029 x 071) m 0.761 0.7436925664 2.2235551112 -0.7015551112
RIX:CC(030 x 023) m 1.52 0.7436925664 2.9825551112 0.0574448888
RIX:CC(030 x 061) m 3.3383333333 0.5258700568 4.3725159703 2.3041506964
RIX:CC(032 x 013) m 1.0728333333 0.5258700568 2.1070159703 0.0386506964
RIX:CC(032 x 017) m 0.0478666667 0.5258700568 1.0820493036 -0.9863159703
RIX:CC(033 x 046) m 0.2937 0.5258700568 1.327882637 -0.740482637
RIX:CC(035 x 020) m 0.1993333333 0.7436925664 1.6618884445 -1.2632217778
RIX:CC(035 x 071) m 0.1256666667 0.7436925664 1.5882217778 -1.3368884445
RIX:CC(036 x 051) m 0.4113333333 0.7436925664 1.8738884445 -1.0512217778
RIX:CC(037 x 046) m 0.1637 0.7436925664 1.6262551112 -1.2988551112
RIX:CC(037 x 057) m 0.1436 0.5258700568 1.177782637 -0.890582637
RIX:CC(038 x 013) m 0.4483833333 0.5258700568 1.4825659703 -0.5857993036
RIX:CC(039 x 020) m 0.3583333333 0.7436925664 1.8208884445 -1.1042217778
RIX:CC(040 x 003) m 1.5466666667 0.5258700568 2.5808493036 0.5124840297
RIX:CC(040 x 015) m 0.0967 0.7436925664 1.5592551112 -1.3658551112
RIX:CC(041 x 012) m 0.2130666667 0.5258700568 1.2472493036 -0.8211159703
RIX:CC(041 x 016) m 0.3318333333 0.5258700568 1.3660159703 -0.7023493036
RIX:CC(042 x 017) m 0.622 0.7436925664 2.0845551112 -0.8405551112
RIX:CC(042 x 019) m 5.6983333333 0.5258700568 6.7325159703 4.6641506964
RIX:CC(043 x 033) m 0.0843333333 0.7436925664 1.5468884445 -1.3782217778
RIX:CC(043 x 037) m 0.0672833333 0.5258700568 1.1014659703 -0.9668993036
RIX:CC(044 x 060) m 0.1892333333 0.7436925664 1.6517884445 -1.2733217778
RIX:CC(045 x 044) m 1.1578333333 0.5258700568 2.1920159703 0.1236506964
RIX:CC(046 x 068) m 0.4403666667 0.5258700568 1.4745493036 -0.5938159703
RIX:CC(049 x 036) m 0.0309666667 0.7436925664 1.4935217778 -1.4315884445
RIX:CC(051 x 005) m 0.5218857143 0.4868610684 1.4793527864 -0.4355813579
RIX:CC(051 x 009) m 0.5239 0.5258700568 1.558082637 -0.510282637
RIX:CC(052 x 007) m 0.0587 0.7436925664 1.5212551112 -1.4038551112
RIX:CC(052 x 014) m 0.1482 0.5760617848 1.2810903177 -0.9846903177
RIX:CC(055 x 006) m 0.0291666667 0.7436925664 1.4917217778 -1.4333884445
RIX:CC(055 x 028) m 0.866 0.7436925664 2.3285551112 -0.5965551112
RIX:CC(056 x 033) m 0.1657666667 0.7436925664 1.6283217778 -1.2967884445
RIX:CC(057 x 052) m 0.2389333333 0.5258700568 1.2731159703 -0.7952493036
RIX:CC(058 x 022) m 0.1606666667 0.7436925664 1.6232217778 -1.3018884445
RIX:CC(059 x 065) m 1.3378333333 0.5258700568 2.3720159703 0.3036506964
RIX:CC(060 x 006) m 0.2975 0.5258700568 1.331682637 -0.736682637
RIX:CC(060 x 037) m 0.1047333333 0.7436925664 1.5672884445 -1.3578217778
RIX:CC(061 x 025) m 0.0929666667 0.7436925664 1.5555217778 -1.3695884445
RIX:CC(061 x 026) m 0.8406666667 0.5258700568 1.8748493036 -0.1935159703
RIX:CC(061 x 039) m 0.3175 0.5258700568 1.351682637 -0.716682637
RIX:CC(062 x 046) m 0.1238333333 0.7436925664 1.5863884445 -1.3387217778
RIX:CC(062 x 072) m 0.449 0.7436925664 1.9115551112 -1.0135551112
RIX:CC(063 x 001) m 0.1171333333 0.7436925664 1.5796884445 -1.3454217778
RIX:CC(063 x 002) m 0.424 0.7436925664 1.8865551112 -1.0385551112
RIX:CC(065 x 010) m 1.5206666667 0.5258700568 2.5548493036 0.4864840297
RIX:CC(065 x 072) m 0.447 0.7436925664 1.9095551112 -1.0155551112
RIX:CC(068 x 035) m 0.368 0.7436925664 1.8305551112 -1.0945551112
RIX:CC(068 x 043) m 0.2233333333 0.7436925664 1.6858884445 -1.2392217778
RIX:CC(070 x 003) m 0.1493666667 0.7436925664 1.6119217778 -1.3131884445
RIX:CC(072 x 063) m 0.7966666667 0.7436925664 2.2592217778 -0.6658884445
RIX:CC(072 x 075) m 0.808 0.7436925664 2.2705551112 -0.6545551112
RIX:CC(074 x 058) m 0.1713333333 0.7436925664 1.6338884445 -1.2912217778
RIX:CC(074 x 062) m 0.1229666667 0.7436925664 1.5855217778 -1.3395884445
RIX:CC(075 x 021) m 0.1245333333 0.7436925664 1.5870884445 -1.3380217778
RIX:CC(075 x 035) m 0.9986666667 0.7436925664 2.4612217778 -0.4638884445




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA