Project measure / variable:   Auwerx1   protein_HFD

ID, description, units MPD:111369   protein_HFD   total blood protein amount   [g/L]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   52 strains     sex: m     age: 29wks
Procedure metabolic panel
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  STRAIN COMPARISON PLOT
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Auwerx1 - total blood protein amount HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested52 strains
Mean of the strain means53.94   g/L
Median of the strain means53.12   g/L
SD of the strain means± 4.3354
Coefficient of variation (CV)0.0804
Min–max range of strain means45.65   –   64.32   g/L
Mean sample size per strain4.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 51 4023.4505 78.8912 10.0471 < 0.0001
Residuals 164 1287.751 7.8521


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 52.34 3.2316   5 1.4452 0.0617 49.1, 57.5 -0.37
BXD100 m 50.22 5.3667   5 2.4001 0.1069 41.4, 55.4 -0.86
BXD101 m 52.72 3.9093   4 1.9546 0.0741 48.4, 57.9 -0.28
BXD16 m 54.96 5.0003   5 2.2362 0.091 47.6, 59.9 0.23
BXD27 m 54.85 3.0827   4 1.5414 0.0562 52.5, 59.3 0.21
BXD32 m 55.5 4.9366   3 2.8501 0.0889 52.6, 61.2 0.36
BXD34 m 51.32 2.062   5 0.92217 0.0402 48.3, 54.1 -0.61
BXD39 m 54.85 2.0567   4 1.0283 0.0375 53.3, 57.8 0.21
BXD40 m 45.65 3.9509   4 1.9755 0.0865 40.9, 49.1 -1.91
BXD43 m 50.8 1.253   3 0.72342 0.0247 49.6, 52.1 -0.73
BXD44 m 54.32 1.9614   5 0.87715 0.0361 51.9, 57.2 0.09
BXD45 m 51.4 1.2832   4 0.64161 0.025 50.2, 52.7 -0.59
BXD48 m 50.0 1.7819   5 0.79687 0.0356 48.1, 52.1 -0.91
BXD48a m 53.0 5.3842   3 3.1086 0.1016 47.3, 58.0 -0.22
BXD49 m 57.0 4.2056   4 2.1028 0.0738 52.8, 61.1 0.71
BXD50 m 54.34 1.4029   5 0.62738 0.0258 52.5, 56.1 0.09
BXD51 m 54.85 0.52599   4 0.263 0.0096 54.4, 55.6 0.21
BXD53 m 59.67 1.7156   3 0.99051 0.0288 58.1, 61.5 1.32
BXD55 m 60.2 1.7205   4 0.86023 0.0286 58.2, 62.4 1.44
BXD56 m 52.7 1.8385   2   1.3 0.0349 51.4, 54.0 -0.29
BXD6 m 52.36 0.9685   5 0.43313 0.0185 51.3, 53.5 -0.37
BXD60 m 63.93 3.1415   4 1.5708 0.0491 60.9, 68.3 2.3
BXD61 m 49.94 2.1431   5 0.95844 0.0429 47.3, 52.8 -0.92
BXD62 m 56.7 4.1191   4 2.0595 0.0726 50.6, 59.5 0.64
BXD63 m 57.25 0.6364   2   0.45 0.0111 56.8, 57.7 0.76
BXD64 m 50.27 2.5078   4 1.2539 0.0499 47.2, 52.9 -0.85
BXD65 m 56.55 1.4844   4 0.74218 0.0262 54.4, 57.8 0.6
BXD65a m 58.45 2.4637   4 1.2319 0.0422 55.4, 60.5 1.04
BXD66 m 61.53 3.6207   4 1.8103 0.0588 58.3, 66.7 1.75
BXD67 m 51.38 1.8873   5 0.84404 0.0367 50.0, 54.6 -0.59
BXD68 m 47.675 2.5915   4 1.2957 0.0544 45.4, 51.4 -1.45
BXD69 m 46.68 1.13   5 0.50537 0.0242 45.3, 48.4 -1.68
BXD70 m 62.8 1.2288   3 0.70946 0.0196 61.9, 64.2 2.04
BXD71 m 53.5 1.0149   3 0.58595 0.019 52.6, 54.6 -0.1
BXD73 m 50.65 2.3231   4 1.1615 0.0459 47.5, 52.5 -0.76
BXD73a m 49.24 2.5185   5 1.1263 0.0511 45.9, 52.4 -1.08
BXD73b m 55.38 3.0153   5 1.3485 0.0544 51.4, 58.3 0.33
BXD75 m 52.96 2.7364   5 1.2238 0.0517 49.4, 57.1 -0.23
BXD77 m 49.38 1.7584   5 0.78638 0.0356 47.0, 51.9 -1.05
BXD79 m 49.58 3.5633   5 1.5935 0.0719 45.0, 54.8 -1.01
BXD81 m 53.03 1.5948   3 0.92075 0.0301 51.2, 54.1 -0.21
BXD83 m 49.433 3.371   3 1.9462 0.0682 46.3, 53.0 -1.04
BXD84 m 49.8 1.6703   3 0.96437 0.0335 48.0, 51.3 -0.96
BXD85 m 51.12 3.1192   4 1.5596 0.061 48.8, 55.7 -0.65
BXD87 m 53.22 2.5193   5 1.1267 0.0473 50.5, 57.3 -0.17
BXD89 m 51.38 2.5721   4 1.2861 0.0501 47.6, 53.3 -0.59
BXD90 m 55.38 1.7727   4 0.88635 0.032 53.6, 57.7 0.33
BXD95 m 55.6 2.2539   4 1.1269 0.0405 53.1, 57.7 0.38
BXD98 m 61.38 2.692   5 1.2039 0.0439 58.7, 65.1 1.72
BXD99 m 53.74 2.6035   5 1.1643 0.0484 49.8, 56.2 -0.05
C57BL/6J m 64.32 1.5466   5 0.69166 0.024 62.2, 66.3 2.39
DBA/2J m 59.76 3.7833   5 1.6919 0.0633 56.0, 65.4 1.34


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 52.34 1.253167207 54.8144219796 49.8655780204
BXD100 m 50.22 1.253167207 52.6944219796 47.7455780204
BXD101 m 52.725 1.401083531 55.4914878757 49.9585121243
BXD16 m 54.96 1.253167207 57.4344219796 52.4855780204
BXD27 m 54.85 1.401083531 57.6164878757 52.0835121243
BXD32 m 55.5 1.6178319076 58.6944650395 52.3055349605
BXD34 m 51.32 1.253167207 53.7944219796 48.8455780204
BXD39 m 54.85 1.401083531 57.6164878757 52.0835121243
BXD40 m 45.65 1.401083531 48.4164878757 42.8835121243
BXD43 m 50.8 1.6178319076 53.9944650395 47.6055349605
BXD44 m 54.32 1.253167207 56.7944219796 51.8455780204
BXD45 m 51.4 1.401083531 54.1664878757 48.6335121243
BXD48 m 50.0 1.253167207 52.4744219796 47.5255780204
BXD48a m 53.0 1.6178319076 56.1944650395 49.8055349605
BXD49 m 57.0 1.401083531 59.7664878757 54.2335121243
BXD50 m 54.34 1.253167207 56.8144219796 51.8655780204
BXD51 m 54.85 1.401083531 57.6164878757 52.0835121243
BXD53 m 59.6666666667 1.6178319076 62.8611317062 56.4722016272
BXD55 m 60.2 1.401083531 62.9664878757 57.4335121243
BXD56 m 52.7 1.9814313316 56.612404674 48.787595326
BXD6 m 52.36 1.253167207 54.8344219796 49.8855780204
BXD60 m 63.925 1.401083531 66.6914878757 61.1585121243
BXD61 m 49.94 1.253167207 52.4144219796 47.4655780204
BXD62 m 56.7 1.401083531 59.4664878757 53.9335121243
BXD63 m 57.25 1.9814313316 61.162404674 53.337595326
BXD64 m 50.275 1.401083531 53.0414878757 47.5085121243
BXD65 m 56.55 1.401083531 59.3164878757 53.7835121243
BXD65a m 58.45 1.401083531 61.2164878757 55.6835121243
BXD66 m 61.525 1.401083531 64.2914878757 58.7585121243
BXD67 m 51.38 1.253167207 53.8544219796 48.9055780204
BXD68 m 47.675 1.401083531 50.4414878757 44.9085121243
BXD69 m 46.68 1.253167207 49.1544219796 44.2055780204
BXD70 m 62.8 1.6178319076 65.9944650395 59.6055349605
BXD71 m 53.5 1.6178319076 56.6944650395 50.3055349605
BXD73 m 50.65 1.401083531 53.4164878757 47.8835121243
BXD73a m 49.24 1.253167207 51.7144219796 46.7655780204
BXD73b m 55.38 1.253167207 57.8544219796 52.9055780204
BXD75 m 52.96 1.253167207 55.4344219796 50.4855780204
BXD77 m 49.38 1.253167207 51.8544219796 46.9055780204
BXD79 m 49.58 1.253167207 52.0544219796 47.1055780204
BXD81 m 53.0333333333 1.6178319076 56.2277983728 49.8388682938
BXD83 m 49.4333333333 1.6178319076 52.6277983728 46.2388682938
BXD84 m 49.8 1.6178319076 52.9944650395 46.6055349605
BXD85 m 51.125 1.401083531 53.8914878757 48.3585121243
BXD87 m 53.22 1.253167207 55.6944219796 50.7455780204
BXD89 m 51.375 1.401083531 54.1414878757 48.6085121243
BXD90 m 55.375 1.401083531 58.1414878757 52.6085121243
BXD95 m 55.6 1.401083531 58.3664878757 52.8335121243
BXD98 m 61.38 1.253167207 63.8544219796 58.9055780204
BXD99 m 53.74 1.253167207 56.2144219796 51.2655780204
C57BL/6J m 64.32 1.253167207 66.7944219796 61.8455780204
DBA/2J m 59.76 1.253167207 62.2344219796 57.2855780204




  GWAS USING LINEAR MIXED MODELS