Project measure / variable:   Auwerx1   temp_t3_HFD

ID, description, units MPD:111289   temp_t3_HFD   body temperature (rectal) in cold (4°C) room, 3h exposed to cold   [°C]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   56 strains     sex: m     age: 21wks
Procedure body temperature
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  STRAIN COMPARISON PLOT
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Auwerx1 - body temperature (rectal) in cold (4°C) room, 3h exposed to cold HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested56 strains
Mean of the strain means35.294   °C
Median of the strain means35.3   °C
SD of the strain means± 1.1508
Coefficient of variation (CV)0.0326
Min–max range of strain means32.325   –   37.34   °C
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 55 331.307 6.0238 12.7324 < 0.0001
Residuals 196 92.7286 0.4731


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 35.8 0.76485   5 0.34205 0.0214 34.7, 36.8 0.44
BXD100 m 36.62 0.35637   5 0.15937 0.0097 36.1, 37.0 1.15
BXD101 m 35.125 0.53774   4 0.26887 0.0153 34.6, 35.8 -0.15
BXD11 m 36.06 0.39749   5 0.17776 0.011 35.5, 36.6 0.67
BXD12 m 36.74 0.77006   5 0.34438 0.021 36.2, 38.1 1.26
BXD16 m 34.74 0.89051   5 0.39825 0.0256 33.4, 35.6 -0.48
BXD2 m 36.16 0.58566   5 0.26192 0.0162 35.2, 36.8 0.75
BXD27 m 32.325 1.6681   4 0.83404 0.0516 30.4, 34.0 -2.58
BXD32 m 35.567 1.106   3 0.63857 0.0311 34.4, 36.6 0.24
BXD34 m 34.26 0.4827   5 0.21587 0.0141 33.9, 35.0 -0.9
BXD39 m 35.64 0.498   5 0.22271 0.014 35.2, 36.4 0.3
BXD40 m 33.95 0.91833   4 0.45917 0.027 33.0, 35.2 -1.17
BXD43 m 36.733 0.61101   3 0.35277 0.0166 36.2, 37.4 1.25
BXD44 m 34.211 0.43141   9 0.1438 0.0126 33.5, 34.9 -0.94
BXD45 m 36.72 0.66483   5 0.29732 0.0181 36.1, 37.7 1.24
BXD48 m 34.44 0.66933   5 0.29933 0.0194 33.5, 35.3 -0.74
BXD48a m 35.133 0.35119   3 0.20276 0.01 34.8, 35.5 -0.14
BXD49 m 34.76 0.50299   5 0.22494 0.0145 34.0, 35.3 -0.46
BXD50 m 34.92 1.2538   5 0.56071 0.0359 33.1, 36.4 -0.33
BXD51 m 34.825 0.66521   4 0.3326 0.0191 34.0, 35.6 -0.41
BXD53 m 35.2 0.42426   5 0.18974 0.0121 34.7, 35.8 -0.08
BXD55 m 36.6 0.57155   4 0.28577 0.0156 35.9, 37.2 1.13
BXD56 m 35.9 0.36056   3 0.20817 0.01 35.5, 36.2 0.53
BXD6 m 34.92 0.71204   5 0.31843 0.0204 33.8, 35.6 -0.33
BXD60 m 33.65 0.6245   4 0.31225 0.0186 32.9, 34.3 -1.43
BXD61 m 36.18 0.57184   5 0.25573 0.0158 35.5, 37.0 0.77
BXD62 m 36.375 0.66521   4 0.3326 0.0183 35.6, 37.2 0.94
BXD63 m 35.95 0.49497   2   0.35 0.0138 35.6, 36.3 0.57
BXD64 m 34.05 0.46547   4 0.23274 0.0137 33.5, 34.6 -1.08
BXD65 m 35.35 0.33166   4 0.16583 0.0094 34.9, 35.7 0.05
BXD65a m 33.45 0.78528   4 0.39264 0.0235 32.3, 34.0 -1.6
BXD66 m 33.64 1.0213   5 0.45673 0.0304 32.6, 35.0 -1.44
BXD67 m 34.4 1.1424   5 0.51088 0.0332 32.6, 35.7 -0.78
BXD68 m 34.525 0.68496   4 0.34248 0.0198 33.7, 35.3 -0.67
BXD69 m 33.92 0.57619   5 0.25768 0.017 33.3, 34.7 -1.19
BXD70 m 37.15 1.2234   4 0.61169 0.0329 35.5, 38.3 1.61
BXD71 m 35.0 0.6   3 0.34641 0.0171 34.4, 35.6 -0.26
BXD73 m 35.0 0.5831   5 0.26077 0.0167 34.3, 35.7 -0.26
BXD73a m 37.06 0.2881   5 0.12884 0.0078 36.7, 37.5 1.53
BXD73b m 35.8 0.25495   5 0.11402 0.0071 35.5, 36.1 0.44
BXD75 m 37.34 0.29665   5 0.13266 0.0079 36.9, 37.6 1.78
BXD77 m 35.58 0.79183   5 0.35412 0.0223 34.3, 36.3 0.25
BXD79 m 34.7 0.5244   5 0.23452 0.0151 33.8, 35.1 -0.52
BXD8 m 35.96 0.52726   5 0.2358 0.0147 35.3, 36.5 0.58
BXD81 m 33.275 0.15   4 0.075 0.0045 33.1, 33.4 -1.75
BXD83 m 35.375 0.79739   4 0.3987 0.0225 34.5, 36.4 0.07
BXD84 m 35.633 0.11547   3 0.06667 0.0032 35.5, 35.7 0.29
BXD85 m 35.25 0.70475   4 0.35237 0.02 34.4, 36.1 -0.04
BXD87 m 36.76 0.37815   5 0.16912 0.0103 36.4, 37.3 1.27
BXD89 m 35.95 0.56862   4 0.28431 0.0158 35.3, 36.6 0.57
BXD90 m 36.175 0.12583   4 0.06292 0.0035 36.0, 36.3 0.77
BXD95 m 34.04 0.89889   5 0.402 0.0264 32.5, 34.8 -1.09
BXD98 m 33.24 0.37815   5 0.16912 0.0114 32.7, 33.6 -1.78
BXD99 m 34.76 0.7893   5 0.35299 0.0227 33.4, 35.4 -0.46
C57BL/6J m 36.62 0.96021   5 0.42942 0.0262 35.4, 37.9 1.15
DBA/2J m 36.96 0.55946   5 0.2502 0.0151 36.4, 37.7 1.45


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 35.8 0.307605226 36.4066409462 35.1933590538
BXD100 m 36.62 0.307605226 37.2266409462 36.0133590538
BXD101 m 35.125 0.3439130978 35.8032451968 34.4467548032
BXD11 m 36.06 0.307605226 36.6666409462 35.4533590538
BXD12 m 36.74 0.307605226 37.3466409462 36.1333590538
BXD16 m 34.74 0.307605226 35.3466409462 34.1333590538
BXD2 m 36.16 0.307605226 36.7666409462 35.5533590538
BXD27 m 32.325 0.3439130978 33.0032451968 31.6467548032
BXD32 m 35.5666666667 0.3971166392 36.3498367606 34.7834965728
BXD34 m 34.26 0.307605226 34.8666409462 33.6533590538
BXD39 m 35.64 0.307605226 36.2466409462 35.0333590538
BXD40 m 33.95 0.3439130978 34.6282451968 33.2717548032
BXD43 m 36.7333333333 0.3971166392 37.5165034272 35.9501632394
BXD44 m 34.2111111111 0.2292753985 34.6632745756 33.7589476466
BXD45 m 36.72 0.307605226 37.3266409462 36.1133590538
BXD48 m 34.44 0.307605226 35.0466409462 33.8333590538
BXD48a m 35.1333333333 0.3971166392 35.9165034272 34.3501632394
BXD49 m 34.76 0.307605226 35.3666409462 34.1533590538
BXD50 m 34.92 0.307605226 35.5266409462 34.3133590538
BXD51 m 34.825 0.3439130978 35.5032451968 34.1467548032
BXD53 m 35.2 0.307605226 35.8066409462 34.5933590538
BXD55 m 36.6 0.3439130978 37.2782451968 35.9217548032
BXD56 m 35.9 0.3971166392 36.6831700939 35.1168299061
BXD6 m 34.92 0.307605226 35.5266409462 34.3133590538
BXD60 m 33.65 0.3439130978 34.3282451968 32.9717548032
BXD61 m 36.18 0.307605226 36.7866409462 35.5733590538
BXD62 m 36.375 0.3439130978 37.0532451968 35.6967548032
BXD63 m 35.95 0.4863665672 36.9091835559 34.9908164441
BXD64 m 34.05 0.3439130978 34.7282451968 33.3717548032
BXD65 m 35.35 0.3439130978 36.0282451968 34.6717548032
BXD65a m 33.45 0.3439130978 34.1282451968 32.7717548032
BXD66 m 33.64 0.307605226 34.2466409462 33.0333590538
BXD67 m 34.4 0.307605226 35.0066409462 33.7933590538
BXD68 m 34.525 0.3439130978 35.2032451968 33.8467548032
BXD69 m 33.92 0.307605226 34.5266409462 33.3133590538
BXD70 m 37.15 0.3439130978 37.8282451968 36.4717548032
BXD71 m 35.0 0.3971166392 35.7831700939 34.2168299061
BXD73 m 35.0 0.307605226 35.6066409462 34.3933590538
BXD73a m 37.06 0.307605226 37.6666409462 36.4533590538
BXD73b m 35.8 0.307605226 36.4066409462 35.1933590538
BXD75 m 37.34 0.307605226 37.9466409462 36.7333590538
BXD77 m 35.58 0.307605226 36.1866409462 34.9733590538
BXD79 m 34.7 0.307605226 35.3066409462 34.0933590538
BXD8 m 35.96 0.307605226 36.5666409462 35.3533590538
BXD81 m 33.275 0.3439130978 33.9532451968 32.5967548032
BXD83 m 35.375 0.3439130978 36.0532451968 34.6967548032
BXD84 m 35.6333333333 0.3971166392 36.4165034272 34.8501632394
BXD85 m 35.25 0.3439130978 35.9282451968 34.5717548032
BXD87 m 36.76 0.307605226 37.3666409462 36.1533590538
BXD89 m 35.95 0.3439130978 36.6282451968 35.2717548032
BXD90 m 36.175 0.3439130978 36.8532451968 35.4967548032
BXD95 m 34.04 0.307605226 34.6466409462 33.4333590538
BXD98 m 33.24 0.307605226 33.8466409462 32.6333590538
BXD99 m 34.76 0.307605226 35.3666409462 34.1533590538
C57BL/6J m 36.62 0.307605226 37.2266409462 36.0133590538
DBA/2J m 36.96 0.307605226 37.5666409462 36.3533590538




  GWAS USING LINEAR MIXED MODELS