Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:163927965-164127994

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spha3 X 103012242 to 163975945 60963703 QTL sperm head anomaly 3
Ap1s2 X 163909017 to 163933666 24649 + protein coding gene adaptor-related protein complex 1, sigma 2 subunit
Zrsr2 X 163935443 to 163958661 23218 - protein coding gene zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2
Cpgi23043 X 163957653 to 163958644 991 CpG island CpG island 23043
Tssr164522 X 163958086 to 163958132 46 - TSS region transcription start site region 164522
Tssr162604 X 163958239 to 163958312 73 + TSS region transcription start site region 162604
Tssr164523 X 163958563 to 163958588 25 - TSS region transcription start site region 164523
Tssr164524 X 163958590 to 163958597 7 - TSS region transcription start site region 164524
Tssr164525 X 163958602 to 163958618 16 - TSS region transcription start site region 164525
Tssr164526 X 163958634 to 163958674 40 - TSS region transcription start site region 164526
Tssr162605 X 163958744 to 163958797 53 + TSS region transcription start site region 162605
Gm38561 X 163975332 to 163983833 8501 + lncRNA gene predicted gene, 38561
DXMit249 X 163975834 to 163975945 111 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 249
Car5b X 163976822 to 164027997 51175 - protein coding gene carbonic anhydrase 5b, mitochondrial
Tssr164527 X 164021898 to 164021942 44 - TSS region transcription start site region 164527
Tssr164528 X 164027965 to 164027994 29 - TSS region transcription start site region 164528
Tssr164529 X 164028000 to 164028029 29 - TSS region transcription start site region 164529
Tssr164530 X 164042326 to 164042340 14 - TSS region transcription start site region 164530
Siah1b X 164070705 to 164076493 5788 - protein coding gene siah E3 ubiquitin protein ligase 1B
Cpgi23044 X 164075970 to 164076674 704 CpG island CpG island 23044
Tssr164531 X 164076100 to 164076129 29 - TSS region transcription start site region 164531
Tssr5717 X 164076130 to 164076166 36 - TSS region transcription start site region 5717
Tssr164532 X 164076446 to 164076462 16 - TSS region transcription start site region 164532
Tssr164533 X 164076482 to 164076511 29 - TSS region transcription start site region 164533
Cltrn X 164090187 to 164118859 28672 + protein coding gene collectrin, amino acid transport regulator
Tssr162606 X 164090188 to 164090201 13 + TSS region transcription start site region 162606
Tssr162607 X 164090236 to 164090249 13 + TSS region transcription start site region 162607
Tssr162608 X 164118325 to 164118342 17 + TSS region transcription start site region 162608
Tssr162609 X 164120017 to 164120020 3 + TSS region transcription start site region 162609