Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:152010432-152211413

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ribc1 X 152004582 to 152016295 11713 - protein coding gene RIB43A domain with coiled-coils 1
Gm39540 X 152009635 to 152014306 4671 + lncRNA gene predicted gene, 39540
DXMit11 X 152012272 to 152012406 134 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 11
Cpgi22997 X 152016236 to 152017118 882 CpG island CpG island 22997
Tssr164396 X 152016269 to 152016302 33 - TSS region transcription start site region 164396
Tssr164397 X 152016344 to 152016351 7 - TSS region transcription start site region 164397
Tssr5703 X 152016418 to 152016427 9 + TSS region transcription start site region 5703
Smc1a X 152016428 to 152061973 45545 + protein coding gene structural maintenance of chromosomes 1A
Tssr162371 X 152016435 to 152016518 83 + TSS region transcription start site region 162371
Tssr162372 X 152023034 to 152023059 25 + TSS region transcription start site region 162372
Tssr162373 X 152026349 to 152026367 18 + TSS region transcription start site region 162373
Tssr162374 X 152026526 to 152026544 18 + TSS region transcription start site region 162374
Tssr162375 X 152026551 to 152026567 16 + TSS region transcription start site region 162375
Tssr162376 X 152027717 to 152027730 13 + TSS region transcription start site region 162376
Tssr162377 X 152036391 to 152036424 33 + TSS region transcription start site region 162377
Gm15267 X 152043049 to 152043512 463 - pseudogene predicted gene 15267
Gm15266 X 152110432 to 152111413 981 - pseudogene predicted gene 15266
Cpgi22998 X 152143875 to 152145413 1538 CpG island CpG island 22998
Tssr162378 X 152144174 to 152144190 16 + TSS region transcription start site region 162378
Tssr162379 X 152144197 to 152144226 29 + TSS region transcription start site region 162379
Tssr162380 X 152144240 to 152144251 11 + TSS region transcription start site region 162380
Iqsec2 X 152144268 to 152225236 80968 + protein coding gene IQ motif and Sec7 domain 2
Tssr162381 X 152178945 to 152178957 12 + TSS region transcription start site region 162381
Tssr5704 X 152178964 to 152178967 3 + TSS region transcription start site region 5704
Tssr162382 X 152178977 to 152179018 41 + TSS region transcription start site region 162382
Tssr162383 X 152179052 to 152179064 12 + TSS region transcription start site region 162383
Tssr162384 X 152180485 to 152180507 22 + TSS region transcription start site region 162384
Tssr162385 X 152194243 to 152194253 10 + TSS region transcription start site region 162385
Tssr162386 X 152201967 to 152201975 8 + TSS region transcription start site region 162386