Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:32494496-32707083

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fli1 9 32422204 to 32542861 120657 - protein coding gene Friend leukemia integration 1
Si5lq2 9 32500455 to 32500594 139 QTL serum IGFBP-5 level QTL 2
Lgth4 9 32500455 to 32500594 139 QTL body length 4
D9Mit90 9 32500455 to 32500594 139 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 90
Cfmq2 9 32500455 to 32500594 139 QTL cystic fibrosis modifier QTL 2
Cq4 9 32500455 to 32500594 139 QTL cholesterol QTL 4
Tssr84256 9 32501295 to 32501305 10 + TSS region transcription start site region 84256
Tssr88676 9 32502522 to 32502534 12 - TSS region transcription start site region 88676
Tssr84257 9 32504329 to 32504334 5 + TSS region transcription start site region 84257
Gm38346 9 32507745 to 32510383 2638 - unclassified gene predicted gene, 38346
Tssr84258 9 32508401 to 32508432 31 + TSS region transcription start site region 84258
Gm27201 9 32508413 to 32516958 8545 + antisense lncRNA gene predicted gene 27201
Tssr88677 9 32515050 to 32515053 3 - TSS region transcription start site region 88677
Tssr88678 9 32524506 to 32524510 4 - TSS region transcription start site region 88678
Gm37474 9 32525145 to 32526958 1813 - unclassified gene predicted gene, 37474
Tssr88679 9 32526937 to 32526941 4 - TSS region transcription start site region 88679
Gm37082 9 32535251 to 32537177 1926 - unclassified gene predicted gene, 37082
Cpgi21540 9 32540365 to 32541720 1355 CpG island CpG island 21540
Tssr88680 9 32541321 to 32541335 14 - TSS region transcription start site region 88680
Tssr88681 9 32541345 to 32541350 5 - TSS region transcription start site region 88681
Tssr88682 9 32541358 to 32541416 58 - TSS region transcription start site region 88682
Tssr88683 9 32541424 to 32541431 7 - TSS region transcription start site region 88683
Tssr88684 9 32541466 to 32541476 10 - TSS region transcription start site region 88684
Tssr88685 9 32541589 to 32541602 13 - TSS region transcription start site region 88685
Tssr84259 9 32541612 to 32541656 44 + TSS region transcription start site region 84259
Tssr88686 9 32541655 to 32541691 36 - TSS region transcription start site region 88686
Cpgi21541 9 32542145 to 32542910 765 CpG island CpG island 21541
Tssr88687 9 32542986 to 32543008 22 - TSS region transcription start site region 88687
Cpgi21542 9 32545384 to 32545701 317 CpG island CpG island 21542
Tssr88688 9 32549507 to 32549529 22 - TSS region transcription start site region 88688
Gm31871 9 32594496 to 32607083 12587 + lncRNA gene predicted gene, 31871
Tssr84260 9 32594745 to 32594747 2 + TSS region transcription start site region 84260
Tssr88689 9 32608979 to 32609001 22 - TSS region transcription start site region 88689
Gm47680 9 32613452 to 32629557 16105 + lincRNA gene predicted gene, 47680
Tssr88690 9 32615943 to 32615948 5 - TSS region transcription start site region 88690
Tssr84261 9 32616262 to 32616290 28 + TSS region transcription start site region 84261
Tssr84262 9 32617690 to 32617711 21 + TSS region transcription start site region 84262
Tssr2818 9 32620946 to 32620949 3 + TSS region transcription start site region 2818
Gm27163 9 32629125 to 32629533 408 + pseudogene predicted gene 27163
Gm31928 9 32630187 to 32632823 2636 + lncRNA gene predicted gene, 31928
Tssr84263 9 32636210 to 32636221 11 + TSS region transcription start site region 84263
Ets1 9 32636221 to 32757820 121599 + protein coding gene E26 avian leukemia oncogene 1, 5' domain
Tssr84264 9 32636233 to 32636269 36 + TSS region transcription start site region 84264
Tssr84265 9 32652465 to 32652485 20 + TSS region transcription start site region 84265
Tssr84266 9 32652502 to 32652510 8 + TSS region transcription start site region 84266
Cpgi21543 9 32672132 to 32672346 214 CpG island CpG island 21543
Tssr84267 9 32679745 to 32679755 10 + TSS region transcription start site region 84267
Tssr84268 9 32679766 to 32679782 16 + TSS region transcription start site region 84268
Tssr84269 9 32681458 to 32681461 3 + TSS region transcription start site region 84269
Cpgi21544 9 32695478 to 32696544 1066 CpG island CpG island 21544
Tssr84270 9 32695678 to 32695686 8 + TSS region transcription start site region 84270
Tssr84271 9 32695692 to 32695705 13 + TSS region transcription start site region 84271
Tssr84272 9 32695715 to 32695719 4 + TSS region transcription start site region 84272
Tssr84273 9 32695751 to 32695775 24 + TSS region transcription start site region 84273
Tssr84274 9 32695806 to 32695816 10 + TSS region transcription start site region 84274
Tssr84275 9 32696005 to 32696095 90 + TSS region transcription start site region 84275
Tssr84276 9 32696865 to 32696876 11 + TSS region transcription start site region 84276
Tssr84277 9 32696986 to 32697011 25 + TSS region transcription start site region 84277
Tssr84278 9 32697927 to 32697939 12 + TSS region transcription start site region 84278
Tssr84279 9 32698247 to 32698274 27 + TSS region transcription start site region 84279
Tssr84280 9 32699410 to 32699423 13 + TSS region transcription start site region 84280
Tssr84281 9 32699811 to 32699821 10 + TSS region transcription start site region 84281
Tssr84282 9 32699890 to 32699897 7 + TSS region transcription start site region 84282
Tssr84283 9 32700270 to 32700298 28 + TSS region transcription start site region 84283
Tssr88691 9 32701187 to 32701192 5 - TSS region transcription start site region 88691
Tssr84284 9 32701292 to 32701312 20 + TSS region transcription start site region 84284
Tssr88692 9 32702878 to 32702894 16 - TSS region transcription start site region 88692
Tssr84285 9 32704174 to 32704185 11 + TSS region transcription start site region 84285
Tssr84286 9 32705129 to 32705135 6 + TSS region transcription start site region 84286
Tssr88693 9 32706328 to 32706350 22 - TSS region transcription start site region 88693