Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:83248472-83479402

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tbc1d9 8 83165352 to 83272934 107582 + protein coding gene TBC1 domain family, member 9
Tssr78254 8 83251286 to 83251303 17 + TSS region transcription start site region 78254
Tssr78255 8 83251308 to 83251324 16 + TSS region transcription start site region 78255
Tssr78256 8 83259312 to 83259339 27 + TSS region transcription start site region 78256
Gm17999 8 83267086 to 83267627 541 + pseudogene predicted gene, 17999
D8Mit247 8 83279652 to 83279780 128 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 247
Cpgi20639 8 83290095 to 83290615 520 CpG island CpG island 20639
Tssr78257 8 83290342 to 83290358 16 + TSS region transcription start site region 78257
Ucp1 8 83290352 to 83298452 8100 + protein coding gene uncoupling protein 1 (mitochondrial, proton carrier)
Tssr78258 8 83290623 to 83290670 47 + TSS region transcription start site region 78258
Elmod2 8 83312632 to 83332486 19854 - protein coding gene ELMO/CED-12 domain containing 2
Cpgi20640 8 83331898 to 83332859 961 CpG island CpG island 20640
Tssr81998 8 83332367 to 83332370 3 - TSS region transcription start site region 81998
Tssr81999 8 83332416 to 83332494 78 - TSS region transcription start site region 81999
Gm32327 8 83332569 to 83338952 6383 + lncRNA gene predicted gene, 32327
Tssr78259 8 83332611 to 83332647 36 + TSS region transcription start site region 78259
Cpgi20641 8 83348323 to 83348856 533 CpG island CpG island 20641
Tssr78260 8 83348438 to 83348450 12 + TSS region transcription start site region 78260
Tssr78261 8 83348451 to 83348481 30 + TSS region transcription start site region 78261
Mgat4d 8 83348472 to 83379402 30930 + protein coding gene MGAT4 family, member C
Tssr78262 8 83348737 to 83348745 8 + TSS region transcription start site region 78262
Gm15660 8 83352556 to 83353033 477 + pseudogene predicted gene 15660
Gm32377 8 83381469 to 83389473 8004 - lncRNA gene predicted gene, 32377
Cpgi20642 8 83389611 to 83390358 747 CpG island CpG island 20642
Tssr82000 8 83389724 to 83389735 11 - TSS region transcription start site region 82000
Tssr78263 8 83389834 to 83389845 11 + TSS region transcription start site region 78263
Tssr78264 8 83389846 to 83389872 26 + TSS region transcription start site region 78264
Clgn 8 83389867 to 83428552 38685 + protein coding gene calmegin
Tssr78265 8 83389880 to 83389889 9 + TSS region transcription start site region 78265
Scoc 8 83434492 to 83458439 23947 - protein coding gene short coiled-coil protein
Cpgi20643 8 83441849 to 83442858 1009 CpG island CpG island 20643
Tssr82001 8 83442424 to 83442436 12 - TSS region transcription start site region 82001
Tssr82002 8 83442442 to 83442467 25 - TSS region transcription start site region 82002
Tssr82003 8 83442478 to 83442507 29 - TSS region transcription start site region 82003
Tssr82004 8 83442521 to 83442543 22 - TSS region transcription start site region 82004
Tssr82005 8 83442583 to 83442594 11 - TSS region transcription start site region 82005
Tssr82006 8 83442608 to 83442630 22 - TSS region transcription start site region 82006
Tssr82007 8 83442656 to 83442667 11 - TSS region transcription start site region 82007
Tssr82008 8 83458352 to 83458365 13 - TSS region transcription start site region 82008
Tssr82009 8 83458386 to 83458397 11 - TSS region transcription start site region 82009
Tssr82010 8 83458406 to 83458417 11 - TSS region transcription start site region 82010
Tssr82011 8 83458435 to 83458442 7 - TSS region transcription start site region 82011
Gm5910 8 83477572 to 83479116 1544 - pseudogene predicted gene 5910