Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:29198511-29298533

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Catsperg1 7 29181321 to 29214035 32714 - protein coding gene cation channel sperm associated auxiliary subunit gamma 1
Cpgi18747 7 29211508 to 29212126 618 CpG island CpG island 18747
Cpgi18748 7 29212496 to 29213182 686 CpG island CpG island 18748
Cpgi18749 7 29213752 to 29213958 206 CpG island CpG island 18749
Tssr71630 7 29213957 to 29213983 26 - TSS region transcription start site region 71630
Kcnk6 7 29221926 to 29232515 10589 - protein coding gene potassium inwardly-rectifying channel, subfamily K, member 6
Cpgi18750 7 29225045 to 29225341 296 CpG island CpG island 18750
Cpgi18751 7 29231958 to 29232839 881 CpG island CpG island 18751
Tssr71631 7 29232451 to 29232471 20 - TSS region transcription start site region 71631
Tssr71632 7 29232478 to 29232527 49 - TSS region transcription start site region 71632
Tssr71633 7 29232537 to 29232610 73 - TSS region transcription start site region 71633
Cpgi18752 7 29237953 to 29238862 909 CpG island CpG island 18752
Tssr71634 7 29238099 to 29238106 7 - TSS region transcription start site region 71634
Tssr65612 7 29238304 to 29238315 11 + TSS region transcription start site region 65612
Tssr65613 7 29238323 to 29238394 71 + TSS region transcription start site region 65613
Yif1b 7 29238329 to 29247597 9268 + protein coding gene Yip1 interacting factor homolog B (S. cerevisiae)
Tssr65614 7 29238434 to 29238456 22 + TSS region transcription start site region 65614
Tssr65615 7 29238478 to 29238507 29 + TSS region transcription start site region 65615
Tssr65616 7 29238510 to 29238557 47 + TSS region transcription start site region 65616
Tssr65617 7 29245739 to 29245750 11 + TSS region transcription start site region 65617
Tssr71635 7 29247122 to 29247138 16 - TSS region transcription start site region 71635
Cpgi18753 7 29247235 to 29248186 951 CpG island CpG island 18753
2200002D01Rik 7 29247521 to 29248467 946 - protein coding gene RIKEN cDNA 2200002D01 gene
Tssr65618 7 29247635 to 29247670 35 + TSS region transcription start site region 65618
Tssr71636 7 29247726 to 29247745 19 - TSS region transcription start site region 71636
Tssr71637 7 29247926 to 29247939 13 - TSS region transcription start site region 71637
Tssr71638 7 29247944 to 29247972 28 - TSS region transcription start site region 71638
Tssr71639 7 29248375 to 29248424 49 - TSS region transcription start site region 71639
Tssr71640 7 29248457 to 29248468 11 - TSS region transcription start site region 71640
Tssr71641 7 29248511 to 29248533 22 - TSS region transcription start site region 71641
Spint2 7 29256323 to 29281912 25589 - protein coding gene serine protease inhibitor, Kunitz type 2
Tssr71642 7 29256412 to 29256416 4 - TSS region transcription start site region 71642
Tssr71643 7 29256491 to 29256594 103 - TSS region transcription start site region 71643
Tssr71644 7 29258540 to 29258575 35 - TSS region transcription start site region 71644
Cpgi18754 7 29281206 to 29282372 1166 CpG island CpG island 18754
Tssr2177 7 29281580 to 29281595 15 - TSS region transcription start site region 2177
Tssr71645 7 29281616 to 29281688 72 - TSS region transcription start site region 71645
Tssr2178 7 29281769 to 29281784 15 - TSS region transcription start site region 2178
Tssr2179 7 29281821 to 29281892 71 - TSS region transcription start site region 2179
Tssr2180 7 29281900 to 29281904 4 - TSS region transcription start site region 2180
Tssr71646 7 29281914 to 29281935 21 - TSS region transcription start site region 71646
Tssr71647 7 29281938 to 29281973 35 - TSS region transcription start site region 71647
Tssr71648 7 29281979 to 29281990 11 - TSS region transcription start site region 71648
Tssr71649 7 29282033 to 29282040 7 - TSS region transcription start site region 71649
Gm45977 7 29283576 to 29288356 4780 - lncRNA gene predicted gene, 45977
Tssr71650 7 29288259 to 29288305 46 - TSS region transcription start site region 71650
Cpgi18755 7 29288992 to 29289795 803 CpG island CpG island 18755
Tssr65619 7 29289278 to 29289285 7 + TSS region transcription start site region 65619
Tssr65620 7 29289300 to 29289324 24 + TSS region transcription start site region 65620
Ppp1r14a 7 29289320 to 29293390 4070 + protein coding gene protein phosphatase 1, regulatory inhibitor subunit 14A
Tssr65621 7 29289327 to 29289338 11 + TSS region transcription start site region 65621
Tssr65622 7 29291369 to 29291386 17 + TSS region transcription start site region 65622
Tssr65623 7 29296631 to 29296634 3 + TSS region transcription start site region 65623
Tssr65624 7 29298288 to 29298290 2 + TSS region transcription start site region 65624