MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:141024859-141258981

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm44385	5	141029928 to 141030008	80	+	miRNA gene	predicted gene, 44385
Cpgi16938	5	141044300 to 141044484	184		CpG island	CpG island 16938
Gm38730	5	141064235 to 141074685	10450	+	lncRNA gene	predicted gene, 38730
Gm26113	5	141080431 to 141080509	78	+	miRNA gene	predicted gene, 26113
Tssr49564	5	141116324 to 141116329	5	+	TSS region	transcription start site region 49564
Gm30866	5	141124859 to 141158981	34122	+	lncRNA gene	predicted gene, 30866
D5Mit380	5	141164308 to 141164427	119		DNA segment	DNA Segment, Chr 5, Massachusetts Institute of Technology 380
D5Dcr30	5	141194598 to 141194693	95		DNA segment	DNA Segment, Chr 5, Derry C. Roopenian 30
D5Mit328	5	141211202 to 141211299	97		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 328
Tssr54275	5	141230296 to 141230300	4	-	TSS region	transcription start site region 54275
D5Dcr6	5	141238500 to 141238596	96		DNA segment	DNA segment, Chr 5, Derry C. Roopenian 6
Cpgi16939	5	141240487 to 141242356	1869		CpG island	CpG island 16939
Sdk1	5	141241497 to 142215586	974089	+	protein coding gene	sidekick cell adhesion molecule 1
Tssr49565	5	141241524 to 141241542	18	+	TSS region	transcription start site region 49565
Tssr49566	5	141241554 to 141241569	15	+	TSS region	transcription start site region 49566
Tssr49567	5	141241593 to 141241605	12	+	TSS region	transcription start site region 49567
Tssr49568	5	141241629 to 141241643	14	+	TSS region	transcription start site region 49568
Cpgi16940	5	141243428 to 141243725	297		CpG island	CpG island 16940